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23 Cards in this Set
- Front
- Back
clinical microbio
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the study of organisms that cause disease
-bacteriology, virology, mycology, parasitology |
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bacteria and archae
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-single-celled, no membrane bound nucleus, no other oragnelles
-prokaryotes = prenucleus -common type in human infection -rod-shaped, spherical and spiral -rigid cell walls -binary fission |
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normal bacterial flora
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- aka microbiota
-bacteria outnumber cells in the body -keep disease-causing organisms from breaching host defenses |
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eucarya
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-organisms contain membrane bound nucleus, eukaryotes = true nucleus
-contains organelles -fungi: single (yeast) or multicellular (molds) -gain energy from organic materials -protozoa: microscopic, found in water, complex, large, motile |
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nomenclature
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- first word is genus capitalized, second word is species name, not capitalized
-full name italicized or underlined |
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microscope
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important factors: magnification, resolution, contrast
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acidic and basic dyes
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-basic dyes carry positive charge and bond to cell structures that carry negative charges-STAIN THE CELL (ex. methylene blue, crystal violet, safranin, malachite green)
-acidic dyes carry positive charge and are repelled by cell structure that carry negative charge-STAIN THE BACKGROUND |
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how to prepare the smear for staining
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1. sterilize the inoculating loop
2. obtain a loopful of broth culture and place on slide "smear" with a loop to make a thin, uniform film on the slide 3. air dry completely |
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gram stain steps
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1. flood with crystal violet-stain cells-wait 1 min
2. gently wash with tap water 3. flood with iodine- holds primary dye onto cell- at this point it is purple-wait 1 min 4. decolorize with ethyl alcohol- at this point gram + are purple and gram - have no color (IMPT STEP) 5. wash with tap water 6. flood with safrinin- wait 10 secs-recolorizes cells that lose stain through decolorization- stains both but only see gram - appear red 7. wash with h2o 8. air dry |
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acid fast stain
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-for genus mycobacterium
-uses heat to facilitate staining 1. primary dye: carbol fuchsin- colors acid fast bacteria red 2. decolorize with acid alcohol- remives stain from non acid-fast bacteria 3. counter stain with methylene blue- non acid fast bacteria-->BLUE, acid fast -->RED |
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capsule stain
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do this if u suspect a capsule
-negative stain, only stains bacjground -capsule stands out |
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endospore stain
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-enhances endospore
-uses heat -if u suspect baciliius infection |
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flagella stain
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-single or several flagella
-staining increases diameter of flagella |
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morphology of prokaryotic cells
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1. coccus: spherical
2. bacillus: rod or cylinder shaped 3. coccobacillus: short round rod 4. vibrio: curved rod 5. spirillum: spiral shaped 6. spirochete: helical shape 7. pleomorphic: bacteria able to vary shape -Cells adhere together after cell division for characteristic arrangements -division along a single plane may result in pairs or chains of cells- pairs = diploccoci; chains = streptococci -division along 2 or 3 perpendicular planes form cubical -division along several random planes form clusters |
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direct testing
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-Demonstration of the presence of an infectious agent
- culture, microscopy, molecular methods such as PCR |
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indirect testing
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-Demonstration of presence of antibodies to a particular infectious agent: Serology
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sterile body sites
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-normally do not contain any bacteria, so any bacteria found there are significant (if they are not sterile that means there is an infection
-blood, CSF, urine |
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non-sterile body sites
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-open to the external environment and normally contain bacteria
-throat, feces, skin -specimens only look for specific pathogens |
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specimen
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1. collection
2. aprropriateness 3. transport to lab 4. innoculation of media 5. culture and isolation 6. identification 7. report |
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urine culture- how to minimize contam
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-: transfer urine to a tube with preservative within 10 min then can be kept for 48hrs at room temp; important to tell patient how to collect sample (clean area, collect mid stream
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how to minimize contamination
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-*look at chart
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criteria for rejection of a specimen
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o Unlabeled or improperly labeled specimen
o Prolonged storage or transport o Improper or damaged container o Specimen received in fixative o Oropharyngeal contaminated sputum o Specimens unsuitable for culture request (anaerobic culture from not acceptable source, urine from Foley catheter) o Dry Swab |
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end of lecture
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*read over!
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