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65 Cards in this Set

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What are the 3 different types of cytoskeleton? What are each made of?
Microfilaments - actin
Intermediate filaments - various proteins
Microtubules - tubules

They are made of repeating subunits of actin/proteins/tubules
What kind of forces can the different types of cytoskeleton resist?
MTs - can resist shear forces
IMFs, MFs - can resist tension forces
What are 4 functions of cytoskeleton?
- determine cell shape/polarity
- intracellular transport
- cell movement and ciliary movement
- cell division
Describe the structure of tubulin.
Dimer of alpha and beta subunit
Globular protein
tubulin dimer is polar
bound to GTP
How much of total soluble brain protein is tubulin?
10-20%
How is tubulin arranged into MTs?
Dimers align head to tail, forming protofilaments
~13 protofilaments align laterally
Describe MT polarity
Beta tubulin end = Plus end (fast assembly/disassembly) - peripheral/basolateral cell

minus end - slower exchange - at MTOC/apex cell

reaches equilibrium
What initiates a MT?
Microtubule organization center (MTOC) (aka centrosome) initiates nucleation
describe the structure of the MTOC (MT organizing center)/centrosome
centrioles + Amorphous cloud + gamma-tubulin critical protein (MTS grow from this)
Describe the dynamic instability of MTs
GTP tubulin added to plus end
GTP hydrolyzes into GDP
GDP tubulin is unstable
loses GTP cap - induces disassembly (catastrophy) (weakens bonds, depolymerizes)
How does an MT grow? shrink?
grow: GTP tubulin adds at the end

shrink: GDP tubulin released into cytosol
What are the 5 configurations/types of MTs?
1. Cytoplasmic MT - single MT radiating from MTOC
2. centrioles, basal bodies - short structure made of 9 triplet MT
3. Axonemal (ciliary and flagellar) MT - 9 doublet + 2 singlet MT
4. Neuronal - axonal, dendritic (type of cytoplasmic MT)
5. Mitotic spindle -
How does an MT grow? shrink?
grow: GTP tubulin adds at the end

shrink: GDP tubulin released into cytosol
What are the 5 configurations/types of MTs?
1. Cytoplasmic MT - single MT radiating from MTOC
2. centrioles, basal bodies - short structure made of 9 triplet MT
3. Axonemal (ciliary and flagellar) MT - 9 doublet + 2 singlet MT
4. Neuronal - axonal, dendritic (type of cytoplasmic MT)
5. Mitotic spindle -
What is the half life of MTs?
- cytoplasmic MTs: 10 mins (v. short! v. dynamic/unstable!) - about 20% of the MTS are more resistent to depolymerization
- Mitotic spindle - VERY unstable (half life = 15 secs) until capped
- neuronal mt - partly stabilized
- Axonemal, basal bodies, centrioles = stabilized
What are post-translational modifications of MTs?
Associated with longevity
- MAPs - (MT assoc proteins)
What is the main function of MAPs?
To be stabilizers
Give 2 examples of MAPs, state their locations
Tau - axonal
MAP 2 - dendrites, soma
What does phosphorylation of MAPs do?
reduces affinity for MT, reduces stability.
What is one hypothesized defect in Alzheimer's disease?
Hyperphosphorylation of tau
What does colchicine do?
MT poison
binds 1:1 with tubulin dimer, blocks further addition
net result: disassembly
What do vinca alkaloids do/
binds ends of MTs and dimers, precipitates tubulin, eleminated from assembly
What is taxol?
binds to tubulin, hyperstabilization of MTs
induces assembly of dimers
When you do chemotherapy, what do you use so as not to disturb other things (ie. GI epithelial cells, blod cell mitosis, intracellular transport in neurons) --> side effects?
titer agents - to destroy cancer w/o side effects
What are the two types of motor proteins in intracellular transport?
Kinesins
Dyneins
What is the structure of kinesin?
Motor domain - globular head
Tail domain - binding cargo
most are plus end directed (N terminal motor domain)
What are catastrophins?
kinesins that disassemble MTs (have internal motor domain)
What is the structure of dyneins?
minus end directed
globular protein head
short shafts
multiple units form tails
What is the dynactin complex?
ie. dyneine activator complex
accessory proteins that bind to dyneine, help in transport
Name 3 causes of mutations of toxic inhibitions of kinesins.\

Name 3 things that this can lead to
acrylamide
organic solvent
organophosphate pesticides


neurodegenerative disease, reproductive failure, cancer
Do the following organelles have kinesin, dynein, or both?
Membrane bound organelles (ie. vesicles, mito, etc.) -both

ER - Kinesin

Golgi - dynein

Chromosomes, other elements at mitosis/meiosis - both

MT-dep intermediate filaments - kinesin
What category are kinesin,dyneine in?
MAPs
What is the ciliary function?
to move fluid or propel cells through fluid
What are 2 places where you can find?
Respiratory and reproductive tracts
Describe the movement of cilia.
Stiff power stroke

loose, rolling return stroke.
Describe the structure of a cilia
9 outer doublet MTs, 1 pair of MTs in the center
how many accessory proteins for cilia are there?
200
Name 2 important cilia accessory proteins.
Nexin - flexible protein that links the outer doublets

Radial spokes - connects outer doublets to inner sheath
What is ciliary dynein?
2-3 globular heads with stalks and numerous base proteins. attached to A MT, moves along B MT (+ to -)
What is the purpose of cross linker proteins between MTs?
To allow for bending (rather than MTs sliding past each other)
What causes immotile cilia syndrome (Kartagener's)? What symptoms does it lead to?
1. Absence of dynein arms
2. Respiratory infections and immotile sperm (male infertility)
What 3 kinds of MTs are there in mitosis?
Kinetochore
Polar MTs
Astral MTs
What happens during the conversion of interphase MTs to mitotic spindle?
During S phase, the replicated centrosomes separate.
Nucleation of MT increases, disassembly of MT at the centrosome also increases --> so rate of dynamic instabiility increases over 20fold
How is the mitotic spindle assembled?
Minus end kinesins align mitotic MTs
Kinesins separate centrosomes.
MTs extend across length of cell.
Dyneines pull centrosomes apart
What happens during metaphase?
Kinetochore captures chromosomes.
one kinetochore captures kinetochore on the opposite side.
tug of war aligns chromosmes equidistant from the poles.
Involves dynamic MT and motor proteins
What happens during anaphase?
Anaphase A
Disassembly of kinetochore MT as chromosomes move apart
Motor proteins maintain attachment

Anaphase B:
Kinesins slide apart of polar MTs
PM bound dyneines pull aster MTs
What happens to membranous organelles during mitosis?
They are equally distributed along MTs to daughter cells.
Summarize the aspects of meiosis/mitosis that MTs/motor proteins are involved in?
- spindle formation and maintenance
- chromosome attachment, alignment, separaton
- organelle distribution
- spindle dissolution
What effects could drugs/toxicants have on MTs?
Bad - uneven distribution of chromosomes; aneuploidy, cancer, inheritable diseases in germ cells
Good - locks cell in mitosis --> apoptosis (used as chemotherapy)
What are thick filaments?
Specific to muscle.
Between IFs and MTs in size
What's the difference between MF/MT and IF subunits?
MF/MT subunits are globular (actin/tubulin)

IF subunits are filamentous
What is an associated protein of MFs?
Myosin - myosin motor can walk on MF scaffolds
Microfilaments can form what?
3D structural scaffolds
What are 2 things implicated in defective MT-regulated cell movement?
Kartagener's syndrome
Male infertility
Is GTP, GDP tubulin bent or straight?
GTP - straight
GDP tubulin - bent - b/c depolymerizing (GTP hydrolysis changes subunit conformation, polymer bonds are weakened)
Describe the nature of assembly and disassembly of MTs
slow assembly
catastrophic disassembly
half life = 10 mins
What is GDP tubulin like?
less compact, thermodynamically unstable -->, therefore induces disassembly
The critical factor in growing the length of MTs is:
GTP in beta tubulin
Give examples of an MT doublet, MT triplets
MT doublet - axoneme (cilia, flagella)

MT triplet - centrioles, basal bodies
Where are the following nucleated?
cilia, flagella - nucleated at basal body
axons - no known MTOC
What is the polarity of mitotic spindles?
minus ends at the poles
How is post-translational modification of MTs related with MT longevity?
-associated (but not cause of longevity!)
- may attract MAPs
What effect do MAPs have on MT stability?
Increase stability
What effect does phosphorylation have on MT stability?
What does this have to do with Alzheimer's?
Decreases MT stability

Maybe alzheimers is caused by hyperphosphorylation of MTs?
What are the two major types of dyneins?
Axosomal dyneine
cytoplasmic dyneine