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55 Cards in this Set

  • Front
  • Back
Name the three classes of biochemical reactions
- Phase 1 = Generation of energy and small compounds ( Not great targets as common in all organisms - e.g. glucose metabolism as energy source and bacteria can use amino acids and lactate)
-Phase 2 = Generation of necessary small molecules e.g. amino acids, nucleotides, phospholipds, amino sugars and carbohydrates - (folate synthesis pathway)
-Phase 3 = Generation of macromolecules e.g. proteins, RNA, DNA, Polysacchardies and peptidoglycan (cell wall)
Why is folate a good target for chemotherapy against bacteria?
-Folate is oxidised into tetrahydrofolate which is required as a cofactor to thymidylate synthetase for uracil to be converted to thymine.
-Folate synthesis occurs in bacteria but not man, humans derive folate from folic acid in diet and have transporters to transport into cell ;bacteria does not have transporters
- Sulphonamides inhibit folate synthesis - (Sulfamethoxazole, Sulfadoxine, Sulfadimidine are examples - all have Sulfa as prefix when antimicrobials)
Name some features unique to bacteria
- Peptidoglycan cell wall
-No nucleus
-No mitochondria as energy genration occurs in plasma membrane
-Have 50s and 30s subunit ribosomes as opposed to the 60s and 40s subunits - (allowing protein synthesis to be a target for therapy)
Name three drug classes which inhibit nucleotide synthesis
- sulphonamides
-dihydrofolate reductase inhibitors
-pyrimidine and purine analogues
How can the base-pairing properties of a nucleic acid be changed?
-the DNA can be intercalted in order to cause frame shift mutations - e.g. proflavine and acriflavine are used as anti-septics
Name some DNA/RNA polymerase inhibitors and there mechanisms of action
- Actinomycin D blocks moverment of RNA polmerase in man and is used in cancer chemo
_ rifamycin and rifampicin inhibit bacterial RNA polymerase
-Acyclovir is a analogue of guanine which is turned into acyclovir triphophate by herpes virus proteins which selectively inhibits DNA polymerase of the herpes virus
-Cytarabine is a inihibitor of mammalian DNA polymerase
What is another name for topoisomerase 2, what is its function and name some drugs which target it?
-Topisomerase 2 is also known as DNA gyrase, it relieves tension from a positively supercoiled DNA as it is being unwound by inserting a negative supercoil by slicing the DNA strand on both sides , think of the string animation.
-fluorquinolones inhibit bacterial DNA gyrase
-Doxorubicin inhibits mammalian DNA gyrase
Name some agents which directly effect DNA and how they are used?
Alkylating agents form covalent bonds with bases and prevent DNA replication , they are used in cancer chemotherapy
Name the 7 hallmarks of cancer
-uncontrolled proliferation
-Dedifferentiation and loss of function
-Invasiveness
-Metastasis
_evasion of apoptosis (cell suicide)
-Induction of angiogenesis
-Failure to senesce (grow old)
Name two main categories of genetic changes that can cause cancer and how they occur ?
- activation of proto-oncogenes into oncogenes
-Inactivation of tumour suppressor genes
-They ocur by point mutations, Gene amplification, chromosomal translocation and can be triggered by viruses or chemical carcinogens
Name the 4 stages of the cell cycle
-G1 phase - Cell grows
-S phase - DNA synthesis
-G2 phase - interval between DNA syntehsis and mitosis
-M phase - mitosis
How does the G1 phase checkpoint regulate cell proliferation?
-G1 (restriction) phase checkpoint - Makes the decision of whether the cell should divide and is controlled by cycle kinase p16 which inhibits CDK4/6 preventing it interacting with cyclin d1 which would normally cause cell growth
-
Name three cell cycle checkpoints
-G1 restiction phase checkpoint
-end of G2 checkpoint - triggers metaphase
- Metaphase checkpoint
What leads to uncontrolled proliferation?
-Growth factors and their receptors
-Growth factor signalling pathways
-Cell cycle transducers: Cyclins and cyclin dependent kinases
-Anti-apoptotic mechanisms
-Telomerase expression
-Tumour directed angiogenesis( growth of new blood vessels)
How can growth factor signalling be increased in a cancer?
-Automnous production of growth factors
-Increased growth factor receptor expression (HER2 is expressed in 20-30% of breast cancers) which can lead to ligand independent signalling (no growth factor needed to activate) and enhanced growth factor sensitivty.
- Mutated receptors which become constitutively active (constantly active)
-Mutated down stream growth signalling molecules such as RAS which is in 30% of tumours
How do cacners become anti-apoptopic?
-cancer can inactive tumour supressors genes and p53 is a gene which is often mutated in (50% of) cancer. P53 normally triggers DNA repair in damaged cells at the G1 checkpoint or triggers apoptosis in irrepairable damage.
-bcl-2 protein is an anti-apoptotic protein which is often over expressed in cacner
-
How does irregularities in the telomeres and telomerase induce the unlimited life potential of cancer?
-telomeres cap the end of chromosomes and protect from DNA degradation and rearrangment. They shorten each time a cell replicates , aging the cells.
-Telomerase is an enzyme which maintains telomeres and is expressed in highly proliferating cells to ensure their long life. Telomerase is not expressed in fully differentiated somatic cells such as neuronal cells.
-95% of malignant tumours express telomerase making them immortal
Name one feature that makes cancers invasive?
-They often express metalloproteinases that break down collagen
Name the 2 main classes of drugs currently used to treat cancer and the 4 subtypes of one of the classes.
-Cytotoxic drugs target and kill the quickly proliferating cells , these include akylating agents, cytotoxic metabolites, anti-metabolites and plant derivatives
-Sex hormones
How do alkylating agents work and name the main alkylating agents ?
-alkylating agents covalently attach alkyl (carbon adn hydrogen groups eg methyl , ethyl ) to the DNA and RNA
- Main currently used agents are the:
nitrogen mustards (mustard gas, melphalan, chlorambucil, cyclophospamide)
-Nitrosoureas - (carmustine, losumustine)
-Busulphan
-Cisplatin
How do alkylating agents disrupt DNA and RNA?
-Alkylating DNA causing DNA fragmentation as repair enzymes attempt to remove the alkyl group
-cross linking DNA with an alkyl group stops separation for synthesis
-can either cross strand link or intra strand link
-Alkylating agents cause the mispairing of nucleotides leading to mutations
How do the nitrogen mustards work?
-They chemically form ja posistively charged carbonium ion which reacts with the electron-rich site which is normally the electron rich n-7 posistion on guanine
-Clinclly used alkylating groups tend to have two alkylating strands so they can cross link DNA
How do the nitrosoureas work?
--they alkylate DNA by creating alkylating groups through spontaneous, non-enzymatic degradation but other ill defined mechanisms are involved.
-Organic isocynates are also released which carbomylate lysine residues in proteins
-Very lipophillic and so cross BBB for use in brain tumuors
Which drug alkylates the N7 of guanine, is used in chronic granulocytic leukaemia and is selective for bone marrow blocking the formation of platelets, granulocytes and red cells? What is its side effect?
-Busulphan
-causes thrombocytopenia (low platlet count)
Name some of the platinum based alkylating drugs and how do they work ?
-Cisplatin, Carboplatin and oxaplatin (carboplatin is the "newer" less toxic version of cisplatin )
- Loses its chloride ions to form a reactive platinum complex which covalently bonds with the N7 groups on the purines
-The platinum disrupts hydrogen bonding
-Is used in testicular and ovarian cancer
-Side effects include severe nausea and vomiting
What must folic acid (folates) be reducded to inorder to act as a purine and pyrimidine biosynthesis co-enzyme? What is this reaction catalyzed by?
-Tetrahydrofolate
-Dihydrofolate reductase
Name a common folate antagonist that is used in chemotherapy
-Methotrexate is a tetrahydrofolate antagonist that preferentially binds to dihydrofolate reductase in order to block the synthesis of tetrahydrofolate.
-Tetrahydrofolate normally provides the methyl group in order to convert dUracilMP (dUMP) to dThymineMP (dTMP)
Name a fraudlent nucleotide that is used in chemotherapy. How does it work?
-Fluorouracil is converted to fluorodeoxyuridine monophosphate and inhibits dTMP synthesis by inhibiting thymidylate synthetase (uses FH4 as co-factor remember?)
-Blocks DNA synthesis but not RNA or protein synth
How does cytarabine work? Why is its effectiveness unpredicatable?
-Is similar to deoxyribose cytosine but has a arbainose sugar instead
-Inhibits DNA polymerase
-Some people can have high levels of the enzyme cytidine deaminase which converts it into its inactive form
-Others can have low levels of deoxycytidine kindase activity
Which chemotherapy drug is a progdrug which is phosphorylated to deoxycytidine kinase? what are its benefits?
-Gemcitabine
-Is incorporated into DNA to block DNA strand elongation
-Is effective against pancreatic cancer with few side effects
Name two purine analogues that are converted into fraudulent nucleotides
-mercaptopurine and thioguanine
Name a cytotoxic antibiotic used in the treatment of Hodgkins lymphoma and list its method of action
-Bleomycin
-Forms a tertitary complex with oxygen and iron (2) leading to oxidation of iron and creation of reactive oxygen species
-Degrades DNA and is most effective in the G2 (pre-mitotic phase)
-Cause pulmonary fibrosis (lung tissue scarring )
Name a topoisomerase 2 inhibitor that belongs to the anthracycline antibiotics.List its method of actions
-Doxorubicin
-Intercalates DNA and blocks DNA/RNA polymerase movement and is used in the treatment of solid tumuors
-Daunorubicin and idarubicin are used in leukaemia treatment
How does the cytotoxic antibiotic Dactinomycin work?
-Dactinomycin intercalates the minor grove of DNA between adjacent G-C pairs, prevent the movement of RNA polymerase.
-This efects gene transcription (DNA -> mRNA) and all phases of the cell cycle. It may effect topoisomerase 2
Which cytotoxic antibiotic is used in the treatment of upper gastro-intestinal and breast cancers? It can cause myelosuppression, kidney damage and lung tissue fibrosis
-Mitomycin
-It alkylates the O6 of guanine and may also create reactive oxygen species which degrade DNA
Name 4 classes of plant derived chemotherapy drugs
-VInca alkaloids (Cincristine, Vinblastine, Vindesine)
-Taxanes (Taxol and docelatel)
-Etoposide
-Campothecins (Irinotecan, Topotecan)
How do bacteria become resistant to the beta lactam antibiotics? How can this resistance be overcome?
-Bacteria can either develop the ability to produce beta-lactamase or modify its pencillin binding proteins so that a beta-lactam antibiotic can no longer bind there - MRSA does this
- A beta lactamase inhibitor can be administered in order to overcome metabolic adaptaions and an example of this is Clavulanic acid
How do the Vinca alkaloids work? What do they treat?
-Vinca alkaloids bind to tubulin in order to block microtubule polymerization, preventing the mitotic spindle from forming (metaphase arrest)
-Is relatively non toxic and is used in the treatment of non-hodgkins lymphoma
Which cytotoxic drug class derived from the yew bark and pine needles binds to tubulin and stablises the microtubules in order to prevent mitosis?
The taxanes are derived from yew bark and are used in the treatment of ovarian cancer, breast cacner and non-small-cell lung cancer
-Are neuropathic and can cause bone marrow supression (serious side effects)
Which drug class is derived from a screaming root in harry potter? What are its mechanisms of action and what does it treat?
-Etoposide
-It is a topoisomerase II inhibtor (prevents negative supercoiling, blocking DNA uncoiling for replication )
-Also inhibits mitochondrial function and inhibits nucleotide transport
-Treats small-cell luing cancer and testicular cancer
- Can cause hair-loss, myleosupression and nausea
How does the campothecin class of drugs work?
-They inhibit topoisomerase 1 and are used in the treatment of bowel cancer
-Have relatively few side effects but can cause diarrhoea and bone marrow supression
Name five hormone dependent cancers
-Testicular
-Breast
-Ovary
-Prostate
-uterus
Name a hormone that is particularly effective in the treatment of hormone dependent breast cancers? How does it work?
-Tamoxifen is a non-steroidal anti-oestrogen
-As a oestrogen receptor antagonist it competes with endogenous oestrogen for its receptor, preventing the transcription of oestrogen-responsive genes
-Shows mild agonist effects in the inner membrane of the uterus and bone
How does the drug fulvestrant work?
-It is a second gen oestrogen receptor antagonist with no agonist effects, unlike tamoxifen
-Forms a complex with the receptor that is quickly degrading , reducing amount of estrogen receptor proteins
which hormone is used as an appetite increaser in a breast cancer sufferer?
-Megestrol acetate is a proestrogen analogue that can also relieve cancer pain
Name three ways in which a hormone dependent cancer can have its growth inhibited using hormone therapy?
-Hormones with opposing actions
-Hormone antagonists (Tamoxifen)
-Inhibition of synthesis
Name a hormone therapy treatment used in the second line treatment of post-menopausal breast cancer and how does it work?
-Drugs which can inhibit the synthesis of adrenal hormones
-Formestane inhibits aromatase which synthesizes oestrogens from androgens
-Trilostane and aminoglutethimide can inhibit sex hormone synthesis in early stage cancer
How do gonadotrophin-releasing hormone analogues work?
-They are used as agonists to stimulating FSH and LH secretion
-Continued use (+10 days) desensitises the receptors and this is the therapeutic goal
-Used in treatment of prostate cancers and some breast cancers
What is the function of Gonadotrophin-releasing hormone?
-It controls the secretion by the anterior pituitary of both follicle stimulating hormone and luteinizing hormonhe, both of which stimulate the production of testerone and oestrogen in the testes and ovaries
How are Glucocorticoids used in the treatment of cancer?
-The immunosupression they create is useful in the treatment of leukaemias and lymphomas
Name the 7 types of resistance a cell can have against anti cancer drugs
-Increase in cellular efflux
-Decreased metabolism to the active agent
-Decrease in drug uptake
-Conversion of active agent into an inactive one by enzymes
-Rapid repair of DNA breaks and cross links
-Increased concentration of target enzyme
-Reduced affinity of the target for the drug
Name some anti-emetics used in cotherapy to reduce chemotherapy sickness?
-5-HT3 receptor antagonists (Ondasetron)
-Cannabis (usa)
Which future treatmens help reduce the amount of myeleosupression (bone marrow suppression ) experienced during chemo
-Bone marrow harvesting
-Stem cell harvesting
Why are solid state tumours hard to treat using classical chemotherapy?
-Solid tumour cells can be in a resting state where no cell division is taking place and then can become reactive and proliferate again
Name 11 possible future treatment routes for cancer?
-Monoclonal antibody therapy
-Ras protein (farnesyltransferase inhibitors)
-Tyrosine Kinase inhibitors
-Serine/threonine protein kinase inhibitors
-Cyclin adn CDK inhibitors
-Metalloproteinase inhibitors
-Telomerase inhibitors
-Angiogenesis inhibitors (Avastin)
-Antisense oligonucleotides and RNAi
-Enhancement of immune system and cancer vaccines
-Gene therapy