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50 Cards in this Set

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Mounting slides

Dry mount - thin slice and then cover slip over




Wet mount - suspended in liquid such as water or immersion oil




Squash slide - wet mount then press down cover slip




Smear slide - add small drop then use edge of cover slip to push along e.g. blood

Light microscope

Low resolution - 0.2um




Low magnification - x1500




Advantages


Easy to set up


Can use live specimen


Cheap


Small and portable

Magnification and resolution

Magnification - how much bigger an image appears compared to the original object




Resolution - the ability of the optical instrument to see or produce an image with fine detail. How well it can distinguish between 2 points close together without showing them together

Magnification triangle

Staining

Some objects are completely transparent so need a stain to be able to view them




Stains increase the contrast between different components as take up stains differently




Methylene blue stains DNA as attracted to negative charge




Differential staining - identify between 2 types of organism e.g. gram-positive/negative bacteria




Counterstain - using 2 dyes to differentiate




Need to chemically fix specimen before staining e.g. dehydrating

Calibrating a light microscope

To find the size of a specimen




Use eyepiece graticule and stage micrometer




Stage micrometer - 1mm and 100 divisions so 1mm = 0.1nm




0.1 (size of 1 stage division) / how many divisions on eyepiece




Measure length of specimen on eyepiece x by answer of previous




Need to recalibrate for different magnifications

Units for size

1nm - x1000 - 1um - x1000 - 1mm - x10 - 1cm - x100 - 1m




1m - /100 - 1cm - /10 - 1mm - /1000 - 1um - /1000 - 1nm

Electron microscope

Use beam of electrons as wavelength smaller than light




Can see ultrastructure




High magnification and resolution




Expensive


Lots of preparation as need specific conditions


Need skill and training to use


Need installing and are large


Specimen must be dead

TEM

Transmission electron microscope (TEM)




Beam of electrons is transmitted through the specimen




Denser parts absorb more electrons so look darker




Resolution - 0.0002um


Magnification - x1,000,000




Specimen must be dead - dehydrated and stained so chemically fixed


Specimen stained with metal salts


Produces 2D black and white image


False colour can be added

SEM

Scanning electron microscope (SEM)




Beam of electrons across specimen and reflected electrons are collected




Resolution - 0.002um


Magnification - x500,000




Gives a 3D image in black and white but can add false colour


Specimen must be dead as coated in a film of fine metal


Done in a vacuum

Magnifications and resolutions numbers

Light 0.2um x1500


TEM 0.0002um x 1,000,000


SEM 0.002um x500,000

Laser scanning microscope

Moves a single spot of focused light across causing fluorescence (gives off light) with components labelled with a dye




Light emitted from specimen is filtered through a pinhole to a detector to produce an image than can be 3D




Only light from close to focal plane is detected to give a clearer image




Look at thick specimen in different depths




High magnification and resolution




Can use living specimen




Used in biological research and diagnosis of diseases

Plasma membrane structure

On surface of animal cells




Just inside cell wall in plants and prokaryotes




Mainly made of lipids and proteins

Plasma membrane function

Regulates the movement of substances into and out of the cell




Receptor molecules to respond to chemicals e.g. hormones

Cell wall structure

Rigid structure that surrounds plant cells




Plants from carbohydrate cellulose




Prokaryotes from peptidoglycan




Absent from animal cell




Fungi from chitin

Cell wall function

Prevents bursting when turgid




Provides strength and support




Maintain the cell’s shape




Permeable to allow solutions to pass through

Nucleus structure

Double membrane called nuclear envelope




Pores in the nuclear envelope




Nucleolus doesn’t have a membrane and contains DNA




Contains chromatin - genetic material of DNA wound on histone proteins




When not dividing chromatin is spread out but coils and condenses into chromosomes when about to divide

Nucleus function

Separate contents from rest of the cell




At some regions the outer and inner membranes fuse so dissolved substances and ribosomes can pass through




Pores allow larger substances to pass through e.g. mRNA




Ribosomes made in the nucleolus




Contains genome and genetic information for protein synthesis




Control centre of the cell

Lysosomes structure

Small bags surrounded by a single membrane




Contain powerful hydrolytic (digestive) enzymes




Abundant in phagocytes such as neutrophils and macrophages that ingest and digest invading pathogens

Lysosomes function

Keep powerful hydrolytic enzymes separate from the rest of the cell




Engulf old cell organelles and foreign matter, digest them and use components for reuse

Ribosomes structure

Small, spherical organelles




20nm in diameterMade of ribosomal RNA




Made in nucleolus as 2 separate sub-units and combine when pass through to cytoplasm




Free in cytoplasm or on RER




No membrane

Ribosomes function

Site where proteins are made




RER ribosomes for synthesising proteins to export out of the cell




Cytoplasm ribosomes assembly of proteins to be used in the cell

Rough endoplasmic reticulum (RER) structure

System of membranes containing fluid-filled cavities (cisternae) that are continuous with the nuclear membrane




Coated with ribosomes

Rough endoplasmic reticulum (RER) function

RER is the intercellular transport system - the cisternae form channels for transporting substances from one area of the cell to another




Provide large surface area for ribosomes and proteins pass through membrane into the cisterna to be transported to the Golgi apparatus

Smooth endoplasmic reticulum (SER) structure

System of membranes containing fluid-filled cavities (cisternae) that are continuous with the nuclear membrane




No ribosomes

Smooth endoplasmic reticulum (SER) function

SER contains enzymes that catalyse reactions involved with lipid metabolism such as the synthesis of cholesterol, lipids/phospholipids and steroid hormones which are all needed by the cell




Involved with absorption, synthesis and transport of lipids from the gut




Synthesises and processes lipids

Golgi apparatus structure

Consist of a stack of membrane-bound, flattened sacs




Vesicles bring material to and from the Golgi apparatus

Golgi apparatus function

Processes and modifies proteins


Adding sugar molecules to form glycoproteins


Adding lipid molecules to form lipoproteins


Folding into 3D shape




Proteins are then packaged into vesicles and pinched off

Vesicles structure

Small fluid-filled sacs in the cytoplasm




Surrounded by a membrane

Vesicle function

Transport substances in and out of the cell via the plasma membrane




Formed by Golgi, ER or plasma membrane

Mitochondria structure

Usually oval shaped 2-5um long




Double membrane - inner membrane folded into cristae




Inner part is fluid-filled matrix with enzymes for respiration

Mitochondria function

Site of ATP production during aerobic respiration




Self-replicating so more is made if energy needs increase




Abundant where much metabolic activity e.g. synapses

Chloroplast structure

Large organelle 4-10um longPlants and protocists




Double membrane




Inner membrane continuous with stacks of flattened membrane sacs called thylakoids which each contain chlorophyll. Each stack of thylakoids is a granum




Fluid-filled matrix is stroma




Chloroplasts contain loops of DNA and starch grains




Grana linked by lamellae - thin pieces of thylakoid membrane

Chloroplast function

Site of photosynthesis




Abundant in leaf cells in particular the palisade mesophyll layer

Vacuole structure

Plant cells only




Membrane called the tonoplast




Contains fluid - cell sap

Vacuole function

Maintain cell stability as when full it pushed against cell wall to make the cell turgid




Turgid supports the whole plant

Cilia structure

Protrusions from the cell and are surrounded by the cell surface membrane




Hair-like structure




Formed from centrioles




Contains microtubules in 9+2 formation with a ring of 9 pairs and 2 in the middle

Cilia function

Microtubules allow cilia to move so can move substances along the cell surface




Epithelial cells in airways have cilia to move mucus

Flagellum structure

Like cilia but longer




Stick out from the cell surface and surrounded by plasma membrane




9+2 formation

Flagellum function

Microtubules contract to make flagellum move




Propel cell forward




E.g. bacteria and sperm cells

Centriole structure

2 bundles of microtubules at right angles to each other




Microtubules are made of tubulin protein subunits arranged to form a cylinder




Small, hollow cylindersIn animal cell but only some plants

Centriole function

Before a cell divides , the spindle made of tubulin threads forms the centrioles




Chromosomes attach to the middle part of the spindle and motor proteins walk along the tubulin threads, pulling chromosomes apart




Involved in formation of cilia and flagella - centrioles multiply and line up beneath cell surface membrane and microtubules sprout outwards to form cilia

Cytoskeleton structure

Network of protein structures in cytoplasm




Microtubules - straight cylindrical and made of protein tubulin




Microfilaments - small, solid strands made of protein actin




Cytoskeleton motor proteins

Cytoskeleton function

Support and strengthen the cell’s shape




Move materials within the cell - track for motor proteins




Form spindle before a cell divides to separate chromosomes




Form cilia and flagella and cause them to move




Support organelles and keep position

Organelles working together - protein production

Genes to code for the protein are in the nucleus and transcription to form mRNA




mRNA moves out of nuclear pore




Translation at the ribosome




Pass into the cisternae of the RER




Vesicle to Golgi apparatus where modified




Vesicle to plasma membrane




Fuse with plasma membrane to be released by exocytosis

Prokaryotes

Single-celled organisms




No membrane-bound organelles




Small cells 2um in diameter




DNA is circular




DNA is free in cytoplasm




Cell wall peptidoglycan




Flagella made of flagellin in a helix




Small ribosomes

Eukaryotes

Make up multi-cellular organisms




Many organelles are membrane-bound




Large cells 10-100umDNA is linear




DNA in nucleus




No cell wall in animals, plants cellulose, fungi chitin




Flagella made of microtubules in 9+2 formation




Large ribosomes

Prokaryote cell diagram

Eukaryotes cell diagram

Bacteria

Prokaryotic




Protective waxy capsule surrounding cell wall




Plasmids - small loops of DNA




Flagella - enable movement




Pili - hair-like structures to adhere to each other or host cells




Nucleoid - area in the cytoplasm where the DNA is positioned




Cell wall from peptidoglycan




Prokaryotes divide by binary fission - DNA replicated in process




No membrane-bound organelles