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126 Cards in this Set

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Saturated FA Properties

Reason:


No double bonds


> Stronger IMF




Properties:


High melting point



Unsaturated FA properties

Reason:


Double bonds


> Weaker IMF




Properties:


Low melting point

What increases fluidity

# double bonds (unsaturations)

Examples saturated and unsaturated

Saturated: butter (more solid)


Unsaturated: oil (more fluid like)

Which of the following is not a polymer?


a. Polysaccharide


b. Nucleic acids


c. Lipids


d. Polypeptides

c. Lipids

Functions fats

Energy storage: 9 cal/g (carb 4 cal / g)




Cushion vital organs: kidneys embedded in adipose tissue




Insulation (polar and marine animals have thick subcutaneous fat layer for insulation)

Which organ embedded in adipose tissue?


a. Liver


b. Kidney


c. Heart


d. Stomach


e. Large intestines


f. Brain

b. Kidney.


The kidney is embedded in adipose tissue for cushioning of vital organs.

What determines characteristics of FA?

# C and # unsaturations

Most common type fat

TG

Structure TG

Glycerol backbone, esterified to 3 FA




FA structure:


Unsaturated or saturated


# C

What gives a phospholipid hydrophilic properties, hydrophobic?

PO43- (phosphate head)




Tail (hydrophobic)

Properties phospholipid




Location

Glycerol backbone:


> esterified to 2 FA (hydrophobic part)


> esterified to 1 PO43- (hydrophilic part) (via attached to -OH of third C of glycerol)




Properties of :


PO43: Hydrophilic head interacting with water


Hydrophobic tail: Avoid water


> Thus consdiered amphipathic






Location: cell membrane

How to show properties phospholipid



Micelle


Phospholipid




> showing amphipathic properties phospholipid

Steroid (structure, function, pathologies, location)

Focus on cholsterol as basic steroid.



4 Fused rings (3 6-C, 1 5-C)
> Hydrophobicity


1 -OH


> Hydrophilicty




Function:


> Component of animal cell membranes (stabilizing cell membrane)


> Precusor for other steroids synthesis


> Form bile acids (Biological 'detergents' which solubilize fats)


Pathophysiology:


> High levels cholesterol contribute to atherosclerosis






Location:


Reaches across half of the bilayer



How does cholesterol span across the bilayer?


a. 1/8


b. 1/4


c. 1/3


d. 1/2 bilayer


e. Spans compeltely across

Reaches across half the bilayer




d. 1/2 bilayer

bile acids (function, structure)

Biological detergents, which solubilize fats




Structure: Cholesterol

Cholesterol in the membrane



Interspersed in membrane


Well within the phospholipid, spanning 1/2 the membrane


Polar heads always point towards hydrophilic heads of phospholipid

Cell membrane (structure, function)

Structure:


Fluid mosaic of:


Phospholipids


Lipids


Proteins (can be spanning entire as integral proteins)


Carbohydrates (found outside (charged))




Function:


Semipermeable barrier



Which is not in cell membranes?


a. Phospholipids


b. Nucleic acids


c. Lipids


d. Proteins


e. Carbohydrates

b. nucleic acids.

Reasons asymmetry of cell membranes

Has proteins (integral proteins spanning throughout)


Has carbohydrates on exterior (b/c charged)

Properties cell membrane

Asymmetric


Fluid


Mosaic: different components:


> phospholipid


> lipid


> protein


> carbohydrate

Movement in C/M

Proteins: little to no




Phospholipids molecules:


Lateral migration


> 22 um/sec


Flip flop


> Rarely


> Reason: Hydrophilic head of molecule must cross hydrophobic core of the membrane




Rotation along axis


> Fast

Tm relation to phospholipids

More unsaturations: lower Tm in melting and freezing b/c more kinks (weaker IMF)


More saturations: Increased Tm in melting and freezing b/c less kinks (stronger IMF)

Impact of cholesterol on changing temperatures

Cholesterol will adapt based on changing temperature.



With increasing temperature, cholesterol makes fluid less fluid


> by restraining the movement of phospholipids)




With decreasing temperature, cholesterol makes more fluid


> by hindering the closing packing of phospholipids and lowering the critical membrane making it harder to become solid and remains fluid

Components C/M

Mosaic structure:


Proteins


> Integral membrane protein


> Peripheral membrane proteins (via weak electrostatic forces)


> also contribtues to assymetry


Carbohydrates


> found outside


> contribuets asymmetry


Lipids


Glycoprotiens


Lipoproteins


ECM elements


Cytoskeleton

Types proteins in c/M


(structure, properties, location)


Functions of these proteins

Integral membrane proteins:


Hydrophilic on outside areas


Hydrophobic on inside areas


Location: Span the hydrophobic interior of the membrane several times


Function:


Commonly function as ion channels b/c span






Peripheral membrane proteins:


Hydrophilic on outside areas


No hydrophobic interior areas (thus no inside only on peripheries)


Location: Loosely bound to the surface of the membrane

What forms ion channels?

integral membrane proteins (with hydorphobic interior and hydrophilic exterior)

Properties of peripheral proteins

Loosely bound to surface of membrane: Frequently exposed to parts of integral proteins




Not embedded in lipid bilayer

Does integral membrane proteins span C/M only once? T/F

False


Integral membrane proteins can span multiple times across C/M

Functions of membrane proteins

Receptor, i.e receptors for Cytokines (signal transduction)


Active and facilitated passive transport


Membrane enzymes


> Transferases


> Hydrolases


> Oxidoreductase


Cell adhesion molecules


> Cell cell identification and interactions


>> Selectins, integrins

Function membrane carbohydrates

Markers that distinguish cells, including infectious agents, such as bacteria


>Application: Markers for antibodies




Adhesion between cells (cell-cell interaction)

Factors contributing membrane asymmetry

Integral proteins


Carbohydrates (on exterior surface)

Where are carbohydrates located

reSTRICTED TO THE EXTERIOR Surface

Role ER in membrane asymmetry

Builds plasma membrane




Delivers PM in reversed orientation to its place of destiny


> Molecules that start on inside face of ER end up on outside face of PM




ER determines asymmetrical distribution of proteins, lipids, carbohydrates

How does PM deliver PM?

In reversed orientation to its place of destiny


Via: molecules starting on inside face of ER ending up on outside face of PM

Result flippase

> ATP hydrolysis for flip flop


> Multi drug resistance in which ATP hydrolysis pumps drugs out of cell membrane


> Cancer


> Chemo

Types transport

Passive transport:


> Simple diffusion


> Osmosis (flow of higher concentration H2O (low conc. solute to lower concentration H2O (High conc. solute))


> Facilitated diffusion - carrier proteins


> Facilitated diffusion - ion channels (* different from physiology)




Active transport:


> Primary AT (Using ATP)


> Secondary AT (Using energy via the downhill passive transport of another molecule) i.e: Na+/Glucose, Na+/AA Secondary AT symporters


> Endocytosis


>> Ex: phagocytosis via macrophages


> Exocytosis: Reverse process via secretion of enzymes, hormones, NT (Ach)

Types osmolarities of RBC and effects

290 mosM: normal


150 mOsM: 50% HEMOLYSIS


Lower tonicity: rapid hemolysis


< 50 mOsM: Compeltel hemolysis

Effect of RBC in:


1. 150 mosm


2. less than 50 mosm


3. 290 mosM.



a. Nothing


b. Some hemolysis


c. 50% Hemolysis


d. Complete hemolysis

1. c. 50% hemolysis


2. d. Compete hemolysis


3. a. Nothing

Effect of rbc at 150 mosm

50% hemolysis

Effect rbc at < 50 mosm

Complete hemolysis

Effect RBC at 290 mosm

Nothing

Slightl decrease < 290 mosm RBC

Beginning water enter

Importance RBC?

An osmometer that can measure swelling.

Facilitated diffusion property

Method:


No energy/ATP needed **


Down conc. gradient




Types transporters:




Transport proteins


> Ion channels (different physiology)


> Carrier proteins

Different simple ad facilitatetd difusion on graph

Simple diffusion: straight lienar non saturable




Facilitated diffusion: Michaelis menten like (Hyperbolic) with maximum VMax b/c of saturation of carrier proteins, i.e: in permease

What is Km?


Description, and units *

The concentration of [S] at which Vmax is 1/2*




Units: milli molar (mM) *

Active ion pumps


(Result mechanism)

Using ATP hydrolysis to pump ions against a concentration gradient.

Function biological membranes

Signal transduction: Needed for function hormones, cytokines that have receptors and do not enter (water soluble/non lipophilic)




Transport




Nerve conductance




Generation and maintenance of electrochemical potential

Use generation and maintenance of electrochemical ptoential





The concentration diff

Na+/K+ ATPase result


What is it?

3 nA+ out


2 K+ in




A form of primary active transport

LDL receptor result

LDL receptor (LDL-R) Participates in endocytosis of LDL cholesterol

Rationale for Na+/K+ atpase transfer of Na+ out, K+ in

atomic weight na+ compared to k+ plays a role in why 3 Na+ goes out and 2K+ in




And K+ more abundant and wants to get rid of more

Types cotransport (secondary AT)

Symporter: both molecules both in same directiON




Antiport: both molecules move in opposite directions

Secondary atp principles

Conformational change




Indirectly linked to ATP hydrolysis




Location:


Types such as glucose/na+ sympmort on apical side.

Does a conformational change result in Sec. AT?

Yes.

What side is glucose-na+ symport protein on


Na+/k+ atpase?

Glucose-na: Apical.




Na+/K+: Basolateral



Sides of Sec. AT and Fac. T for glucose?

SAT: Apical symporter of Na+/glucose


FT: Basolateral (down) via glucose going down concentration gradient of glucose

Gramicidin A (Result mechanism)

Result: Active against gram positive cocci


Mechanism: deplete cell of necessary cations




Considerations:


Topocal infections, not internal infections b/c its effect on our RBC can cause hemolysis and faster than effect on abcteria

Types ligand gating

Voltage gated: Electrical potential difference causes nerve pulse transmission




Ligand gated: Noncovalent bond of chemical lgiand, Ach, causes conformational change




Mechanically gated: Allosteric change in channel.

What is the most important single factor to organize molecules of living matter into complex structural entities such as cellular plasma membranes or organelles?H

Hydrophobic effect




also: formation of detergent micelles

Composition of lipid in cellular plasma and organelle membranes

40-80% lipid

What is the most prevalent lipid in cell membranes?

phospholipids

What type of molecule is cholesterol?


a. polar


b. nonpolar


c. amphipathic




Reason?

c. Amphipathic




hydrophobic layer: planaer steroid ring


polar layer: -OH group

location of plasma membrane cholesterol.

Polar region near phosphate head




Nonpolar steroid ring near hydrophilic lipid tails

Methods of phospholipid movement in membranes.


Describe them.

Rapid rotation around central long axis




Move laterally (1x10^-8 cm2/s)




Flip and flop


> slow process, but can be facilitated with proteins

Difference between integral and peripheral membrane proteins.

Integral:


Have polar heads near ECM and cytosol


Has non-polar tails in the interior of C/M


> Dissolve using detergent




Peripheral:


Have only polar regions on polar head


> Dissolved by shifting the the ionic strength of pH of the aqueous solution

Contributions to asymmetry in C/M

Peripheral proteins


Carbohydrate portion of glycolipids




cause asymmetrical orientation

Effect of failure of Na+/K+ ATPase

Cell may swell or shrink

1. Cells placed into 290 mOsm. What will happen?


2. Cells placed in 150 mOsM. whAT WILL Happen?


3. Cells placed in 50 mOsM. What will happen?


a. some water will flow in


b. 50% cells undergo hemolysis


c. 100% cells undergo hemolysis


d. some water will flow out


e. moderate crenation


f. complete crenation


g. nothing

1.


g. since isotonic


2.


b. since hypotonic enough for 50% cellular hemolysis


3. c. since too hypotonic and compelte 100% hemolysis

A facilitated transporter is now active for glucose.. what will happen?

Glucose flow down its concentration gradient with assistance of protein (carrier), but then saturation will eventually be reached at Vmax.




Values:


Km = substrate concentration [S] at which 1/2 Vmax


Vm = maximum enzyme activity

Know the structural components of the cell membrane

All biological membranes basically made of phospholipid bilayer


May include:


- Lipids such as steroids


- Proteins


- Carbohydrates


- Glycolipids


- Glycoproteins

All biological membranes must contain which of the following?


a. steroids


b. phospholipid bilayer


c. protein


d. carbohydrates


e. glycolipids


f. glycoproteins

b. phospholipid bilayer


All biological membranes made basically of phospholipid bilayer, others are optional.

What do all lipids have in common?



Low or no affinity for water.

Which correctly describes lipids?


a. lipids are macromolecules


b. lipids are the third larger macromolecule


c. lipids have a moderate level of affinity for water due to some hydrophilicity


d. lipids have low or no affinity for water



d. lipids have low or no affinity for water

Which is the smallest macromolecule?


a. nucleic acids


b. proteins


c. lipids


d. polysaccharides

c. lipids




Lipids are macromolecules that do not include polymers, but smaller than true macromolecules

Which describes a lipid?


a. micromolecule


b. macromolecule


c. polymer



b. macromolecule

What do lipids mostly consist of?


a. fatty acids


b. glycerol backbone


c. hydrocarbons


d. phosphate heads


e. steroid chains

c. hydrocarbons




Consist mainly of hydrocarbons

What are the 3 classes of lipids?

Fats


Steroids


Phospholipids

Which of the following is not considered a class of lipid according to slide 5 ?


a. fat


b. steroid


c. wax


d. phospholipid

c. wax




Rest considered lipids according to slide 5

Describe Fat

Triglyceride


1 glycerol esterified via dehydration reaction (removing 3 H2O) to 3 FA




Properties FA:


Long linear unbranched carbon skeleton


16 or 18 carbon atoms


Carboxyl group (hydrophilic): head


Long hydrocarbon tail



What are responsibile for FA hydrophobicity?

C-H bonds

WHAT IS AN ESTER BOND IN FA?

Bond between OH and COOH.

What determines characteristics of FA?



Length


# and location of double bonds

Which of the following causes hydrocarbon tails to pack together?


a. saturated fats


b. unsaturated fats


c. cholesterol


d. glycoproteins



a. saturated fats cause hydrocarbon tails to pack together

Which of the following causes hydrocarbon tails to have a high melting point?


a. saturated fats


b. unsaturated fats


c. cholesterol


d. glycoproteins

a. saturated fats cause hydrocarbon tails to pack together

What has an important influence on membrane fluidity at different temperature?

Unsaturated fats

What has an important influence on membrane fluidity at different temperature?


a. saturated fats


b. unsaturated fats


c. cholesterol


d. glycoproteins


e. glycolipids

b. unsaturated fats




Unsaturated fats have an important influence on membrane fluidity at difference temperatures.

Properties fat

Energy storage (1g fat 9kcal/g)


Cushion for vital organs


> kidneys are embedded in adipose tissue (fat)


Insulation

Which organ is embedded in fat?


a. brain


b. liver


c. kidneys


d. pancreas


e. stomach


f. SI


g. LI



c. kidneys

How are phospholipids differ from fats?

Only 2 FA, third FA replaced by phosphate group

Properties of phospholipids

Hydrohphobic (hydrocarbon tail)


Hydrophilic pO43- head




When water added:


Micelle/phospholipid bilayer orientatoin via:


> Phosphate heads face water


> Nonpolar tails away from water

What causes heart arrhythmia?

Malfunction of gap junctions

How do heart cells beat in coordination?

After they touch each other and gap junctions connect the cytoplasms of adjacent touching cells.

Heart cells are placed near one another, but do not touch. w hat will happen?


a. beat in coordination


b. beat independently


c. beat at times in coordination and times independently.


d. beat as one heart

b. beat independently




Separated myocyte beat but without coordinatino if they do not touch each oth er.




They will only beat in coordination if they contain gap junctions and touch one another

What is responsible or light absorption in theh eye?


a. bacteriorhodopsin


b. retinal


c. a 7 alpha helical protein

b. retinal



What describes retinal?


a. a 7 alpha helical protein that spans the bilayer


b. a light driven proton pump protein


c. an aldehyde of vitamin A that absorbs light

c.

What is rhodopsin

A 7 alpha helical protein spanning the bilayer which is a light driven proton pump

What describes the structure of steroids?


a. 6 hexose rings


b. 2 hexose rings and 2 pentose rings


c. 3 hexose rings and 1 pentose rings


d. 3 hexose rings and 2 pentose rings


e. 3 pentose rings and 1 hexose ring

c. 3 hexose rings and 1 pentose ring

Function steroids?




Structure steroids



Function:


Precursor for other steroid synthesis
Stabilization of the membrane


Bad:


> may promote atherosclerosis


Precursor bile


Essential component of most membranes




Structure:


4 rings (3 hexose, 1 pentose)


Reaches across 1/2 of the membrane

Which of the following functions in the stabilization of the membrane?


a. saturated fatty acids


b. unsaturated fatty acids


c. cholesterol


d. glycoproteins


e. glycolipids

c. steroids

Which of the following contributes to atherosclerosis in high levels?


a. saturated fatty acids


b. unsaturated fatty acids


c. cholesterol


d. glycoproteins


e. glycolipids

c. cholesterol

Cholesterol travels how far across the c/m?

Reaches across half of the membrane

Structure steroids.



4 rings (3 hexose rings, 1 pentose ring)


1 of the 3 hexose rings have a double bond.

Do steroids have to have a double bond?

Yes on 1 of the hexose rings (3 hexose rings, 1 pentose ring)

What describes steroids overall?


a. hydrophobic


b. hydrophilic


c. amphipathic




Why?

c. amphipathic




Hydrophobic 4 carbon rings and hydropilic Polar -OH on the ring

Describe movement of phospholipids

Overall: move randomly


Migration rate: 22 um/s




Types movement:


LateraL (fast)


Rotation (fast0


Rarely flip flop (require proteins)

Role of ER in membrane asymmetry

Plasma membrane build by ER


The eR then determines asymmetric distirbution of proteins, lipids, and carbs

Which of the following determines asymmetrical distribution of proteins, lipids, and carbohydrates on P/M?


a. Rough ER


b. Smooth eR


c. Golgi Apparatus


d. Mitochondria


e. P/M

a. Rough ER




Not only does the RER synthesize P/M, it also determines asymmetrical distribution of the proteins, lipids, and carbs in the P/M

Which of the following synthesizes the P/M?


a. Rough ER


b. Smooth eR


c. Golgi Apparatus


d. Mitochondria


e. P/M

a. Rough eR

Factors affecting membrane fluidity. Describe.

3 factors:


temperature


A saturation or unsaturation


Cholesterol




Temperature:


Membrane fluid until critical temp, Tm, reached at which the membrane solidifies.




But the temperature of solidification depends on unsaturated hydrocarbon tails.




With unsaturated hydrocarbon tails, we have kinking which weakens IMF and thus lower temperature required (# Unsaturations decrease solidifying temeprature of membrane)




Cholesteorl:


Increase temp, less fluid


Low temp, more fluid




Thus, cholesterol lower critical temp (temp solidification of phospholipids)

Describe protein mobility.




Compare to phospholipid mobility.

Slower than phospholipids




Reason:


Proteins larger


Immobile by virtue of their attachment to cytoskeleton

1. What causes proteins to be immobile?


2. What causes their movement to be much slower?


a. large


b. electrostatic forces ebtween their AA


c. attachment to cytoskeleton


d. They are not, they are quite mobile



1. c.


2. a.

Describe membrane carbohydrates

Branched oligosaccharides


Short with < 15 monosaccharides




Oligosaccharides can form


> glycoproteins (via covalent binding to proteins)


> glycolipids (via covalent bonding to lipids)




Function:


> adhesion


> cell-cell interaction

Function LDL receptor

Endocytosis of LDL molecules

Where does the AP start?

Axon hillock

What is the myelin sheath made of?

Cholesterol


H2O


Lipid: glycolipid-galactocerebroside


Protein: glycoprotein proteolipid

Lipid component of myelin?


a. cholesterol


b. glycolipid-galactocerebroside


c. glycoprotein proteolipid


d. phospholipid

b. glycolipid-galactocerebroside

Protein component of myelin?


a. cholesterol


b. glycolipid-galactocerebroside


c. glycoprotein proteolipid


d. phospholipid

c. glycoprotein proteolipid

Protien component myelin?

glycoprotein proteolipid

Lipid component myelin?

Glycolipid-galactocerebroside

How is bacteriorhodopsin grown?

Low levels O2, 4 M NaCl

How is bacteriorhodopsin grown?


a. high levels o2, 0 M NaCl


b. high levels o2, 4 M NaCl


c. low levels o2, 0 M NaCl


d. low levels o2, 4 M NaCl


e. low levels O2, 8 M NaCl


F. HIGH levels o2, 8 M NaCl

d. low levels o2, 4 M NaCl

Which describes peripheral membrane proteins?**




Location


Bond


Function


Properties

On the peripheries, usually associated with integral


Not in interior


Loosely attached to membranes via electrostatic interactions




Properties: easily released with high salt solution




Involved in eTC

Which describes integral membrane proteins?**

Solbulization requires disruption via detergent




Usually span




Asymmetry required for most functions


> cell surface


> transport

which of the following is incorrect?


a. Ach receptor only contains L amino acids


b. Asymmetry is not required for most functions in integral membrane proteins


c. Bacteriorhodopsin is grown with low O2 and 4 M NaCl


d. Detergent is not required to disrupt peripheral proteins, only salt.



b. false.




Explanation:


a. correct


b: not correct, asymmetry is required for most functions especially in integral membrane:


i.e: cell surface markers, transport proteins


c: correct


d: correct