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22 Cards in this Set

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Phylogeny

Evolutionary history of groups of organisms

Tree

Branches

Population through time

Nodes

Forks where ancestors spliy into 2> descendants

Tips

Extinct/extant species

Sister taxa

Groups that occupy adjacent branches linked by a node

Clade

All descendants

Polytomy

- >2 groups emerge from a node


- star phylogeny

Outgroup

Taxon diverged prior to most ancient node

Star phylogeny

Adaptive radiation


Rapid speciation

Monophyletic group

True clade: ancestors all descendants



Paraphyletic group

Common ancestor but only some descendants

Polyphyletic group

Different common ancestor

Adaptive radiation

Appear in phylogeny as polytomies


(Star phylogeny)

3 mechanisms of rapid speciation

-Colonization events:


Habitat colonizes by species-quickly radiates to exploit new resources


-morphological innovation:


Allows new resources to be exploited


-mass extinction:


Remove competitors from system

Inputs to create phylogeny

-fossil records


-comparative Molecular biology


-Molecular clock


-orthologs


-comparative anatomy/embryology


-biogeography

Fossil types

-organically preserved


-compressed carbon film


-casts


-per mineralized (petrified wood)

Fossil limitation s

-habit bias:burrowers and soft bottom


-taxonomic bias: things with hard parts better fossils


-temporal bias: older less likely


-abundance bias

Caveats

Generation times


-mituation affected by selection


-

Cladistics

Tool for e estimating phylogeny


-from: morphology/development/Molecular/behavior


-creates a absence/presence matrix


-shows evolution

Cladogram

Phylogeny tree created by cladistics

Homoplasies

Similar traits are not homologous

Phylogenetic inference

Uses phylogeny to understand evolutionary history