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20 Cards in this Set

  • Front
  • Back

Biogeochemical Cycling

Metabolic degradation of biomass


Elements cycle through the biosphere



Elemental composition

Biogenic element proportions


Similar in bacteria and humans


Mostly Carbon

Elemental cycling changes

Oxidation states


Physical condition


Metabolic activity

Carbon oxidation states


-4


-2


0


2


4

methane

methanol/ hydrocarbons


carbohydrates/ glucose


formic acid


carbon dioxide/bicarbonate ion


Carbon cycling

Land: CO2 fixation into soil humus, slow


Atmospheric: rapid


Oceans: organic matter decomposition


Sediments: large reservoir, long turnover

CO2 Fixation

Usually via photosynthesis sometimes chemosyntheses

Oxygenic Photosynthesis

higher plants, eukaryotic microalgae, cyanobacteria


CO2 + H2O --> CH2O + O2

Anoxygenic photosynthesis

Purple sulfur, green sulfur


CO2 + H2S --> CH2O + S

Respiration

Occurs in dark and light


CH2O + O2 -->CO2 + H2O

Decomposition of organic matter

Catabolic energy yielding reactions, organotrophs


photosynthetic fixed C is remineralized to CO2 and CH4


Net positive rate of photosynthesis over respiration --> net biomass production


Oxidative/reductive balance important

know this

Methanotrophs

Ch4 --> CO2


MMO- methane monooxygenase catalyses methanol step


Microaerophilic gradient organisms

Anoxic Decomposition

1. Hydrolysis of polymers


2. Primary fermentations - creates reactants for synotrophs


3. secondary fermentations (H2 producing fatty acid oxidizing synotrophs)


4. H2 consumption by methanogens and acetogens

Synotroph conditions

H2 concentration must be low


Methanogens help maintain this



Consortium

Community members acting in cooperation to complete anoxic decomposition

Interspecies H2 Transfer

Ethanol fermenting synotrophs create H2 that is used by H2 utilizing methanogens

Other


Organic compounds --> methane

1. Fermentation of glucose

2. Butyrate fermenting synotrophs that create H2


3. Acetotrophic methanogenisis


4. Acetogenisis from H2


Rumen Fermentation

glucose --> acetate, propionate, butyrate, CO2, CH4, H2O


Do not possess cellulases. Methanogens process food to VFA


VFA absorbed in blood and oxidized for energy

Vertebrate digestive systems

Differ depending on diet


Colonic, cecal, rumen fermenters

Ch4 vs CO2

CH4 is 30x ore potent, CO2 is more abundant