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185 Cards in this Set

  • Front
  • Back

Big Bang (When?)

10-15 bn years ago

Form Protons and Neutrons

Quarks

Protostars produce heavier elements up to... ?

26 Fe

Protostar explosion

Supernova

Formation of our solar system and sun (When?)

4.6bn years ago

Main elements forming earth in molten phase

Fe, Mg, So, O

Age of oldest rocks

4.28 bn years old

Formation of Earth's crust (When?)

4.2 to 4.1 bn years ago

First atmosphere composition

H2 and He

Second atmosphere composition

CO2, N2, H2O, H2*, S gases*, ammonia*, methane*

Heavy bombardment period (when?)

4.5 - 3.8 bn years ago

Generated 2nd atmosphere (what?)

Volcanic out-gassing (80%) and impact bodies (20%)

Third Atmosphere Composition

O2, N2, traces of other gases

Liquid water on Earth surface by when?

3.9bn years ago

Biomarkers

Sterols, pigments, org. C deposits, chemical changes

Isotope of C favored by enzyme rxns

12C

Miller-Urey experiment (produced what?)

17 of 20 amino acids, all purines and pyrmidines

Murchison meteorite contained what?

Purines/Pyrimidines, polyols, aa's

Organic compounds (what are they?)

C-Rich compounds with C-C bonded together

ALH84001 meteorite contained what?

Evidence of microorganisms

Organic molecules in space found w/infrared spectroscopy

Methane, Methanol, Formaldehyde, Cyanoqcetylene

Ribozyme (What is it?)

RNA molecule with enzymatic properties

First step in evolution of cells

Formation of outer membrane to encase nucleic acids & proteins

Fused to form vesicles

Micelles

Requirements for life

Liquid Water, Energy Source, Essential elements

Three main sources of organisms

Light, Organic Molecules, Inorganic Molecules

External energy constraints

Shortage/Food Quality

Internal Energy Constraints

Digestion/Enzyme Catalysis

Hydroxy-apatite (makes up what?)

Bones of vertebrates

Cytochrome (Do what?)

Electron carrier proteins

6 main elements used by Organisms

C, H, O, P, N, S

Two factors that affect concentration of essential elements

Different environments & geological time

Characteristics of first organism

Chemoautotroph or heterotroph, anaerobic, hyperthermophilic, halophilic, prokaryotic

Earliest form of photosynthesis based on?

Sulfur

Earliest form of photosynthesis was...

Anoxygenic

Earliest form of photosynthesis carried out by?

S bacteria

Early photosynthesis chemical equation

CO2 + 2H2S = CH2O + 2S + H2O

First appearance of photosynthetic cyanobacteria

3.5-2.7 bya

Collects in ocean after start of O2 production on Earth

SO4 ²-

SO4 ²- accumulation in ocean (result of what?)

S and N oxydation

When do eukaryotes first appear in fossil records

1.8 bya

How old are rocks in which steranes produced by eukaryotes are found

~2.7bya

Prokaryote type of ribosome

70s ribosome

Prokaryote outer cell wall composition

Peptidoglycan

Mitochondria (what type of bacterium)

Proteobacterium

Chloroplast (What type of bacterium)

Cyanobacterium

Nucleomorph (What is it?)

Remnant of nucleus of endosymbiont in chloroplast

What is classification in each lineage of life based on?

rRNA

HGT effected by what?

Plasmid

What % of E. Coli genome can be traced to HGT

20%

Three major groups of Archea

Euryarchaota, Crenarcheota, Korarcheota

Lochiaracheota (what are they?)

Newly discovered group of organisms identified near deep sea vents off coast of norway

Euryarchaota (contain what?)

Methanogens and halophils

Euryarchaeota (live where?)

Extreme environments

How many major lineages of bacteria?

12

Most ancient group of bacteria

Aquifex-Hydrogenobacter group

Aquifex-Hydrogenobacter group (what type of metabolism)

Hyperthermophilic Chemoautotroph

Aquifex-Hydrogenobacter group (what energy source?)

H2 or reduced S

Proteobacteria (Contain which genera?)

Heterotrophic and Phototrophic genera

Proteobacteria (Contains which type of bacteria?)

Purple and Green Sulfur bacteria

Proteobacteria, main characteristics

Anoxygenic Photosynthesis, most metabolically diverse group

Proteobacteria examples

E. Coli/Purple Photosynthetic Bacterium
N2 fixation (What is it?)

Conversion of N2 into NH3

Cyanobacteria (Main Characteristics?)

Phototrophic, Oxygenic Photosynthesis, most important primary producers in lakes/oceans

Excavates (Main Characteristics?)

Diverse, Parasitic Org., Flagellated, Obligate Anaerobes

Excavates (Examples?)

Trichonympha, Entamoeba Hystolytica

Trichonympha (Main characteristics)

Lives in termite guts, cellulose degrading bacteria, symbiotic

Cause of sleeping sickness?

Trypanosoma

Trypanosoma (Type of Organism?)

Kinetoplastid

Chromalveolates (Contain What?)

23 previous groups, algae, some non-photosynthetic groups



Algae acquired chloroplasts how?
Secondary or Tertiary Endosymbiosis
Chromalveolates (Characteristics)

Primary producers/Consumers planktonic communities lakes/oceans

Examples of Chromalveolate groups

Dinoflagellates, apicomplexa, ciliates, brown algae, diatoms

Dinoflagellates (what type of species)

Heterotrophic and phototrophic



Dinoflagellates (Characteristics)

Form dormant cyst stage, some symbionts of corals

Apicomplexa (Characteristics)

Obligate parasites, apical organelle complex to help attach

Apicomplexa (Example)

Plasmodium sp.

Diatoms (Characteristics)

10 000 species, 25% global primary prod., exoskeleton, male gamete flagellum

Frustule (What is it?)

Silica exoskeleton of diatoms

Oomycetes (Characteristics)

Water molds, filaments, cause agricultural diseases

Agricultural diseases caused by Oomycetes

Downy mildew of grapes, Potato blight

Phaeophyta (Characteristics)

No unicellular representatives

Diatoms, Oomycetes, Phaeophyta (Part of which larger group?)

Stremenophile

Rhizaria (Characteristics)

United only by molecular data, heterotrophic cells

Structure produced by Rhizaria, used in feeding

Pseudopodia

Archeplastida (what is contained in this group?)

Red & Green Algae, Land Plants, Charophytes

Archeplastida plastids originated how?

Primary Endosymbiosis

Archeplastida type of sexual reproduction

Isogamy and Oogamy

Chlamydomonas (Characteristics)

Unicellular, model for evolution

Colonial form of Chlamydomonas

Volvox

Chara (characteristics)

distinct reproductive systems with eggs



Chara and Chamydomonas (Part of which group?)
Chlorophyta
Unikonts (Contain what)
Parasitic protists, slime molds, amoebae, animals and fungi, Choanoflagellates

Choanoflagellates (characteristics)

Simplest and most ancient of animals, ressemble cells of sponges

When do multicellular organisms appear?

600mya

Appearance of multicellular organisms coincides with what?

Dramatic rise in O2 in atmosphere

How many times have all different forms of multicellularity evolved

At least 16 times

Provides geological evidence for Fe(III) reduction

Massive Magnetite accumulation during Archaean era

Great Oxidation event (occured when?)

2.4 bya

Noxious by-products of O2

Superoxide, Hydrogen Peroxide
What should organism classification reflect?
Reflect evolutionary distances/relationships

Used by Halophils in light mediated ATP pathway

Bacteriorhodopsin

Heterocysts (what are they?)

Help with N2 fixation in bacteria

Algae (acquired chloroplasts how?)

Secondary and Tertiary Endosymbiosis

Responsible for red tides

Gonyaulax

Responsible for Malaria
Plasmodium sp
Contains plastids that occured by primary endosymbiosis

Archeplastida

Isogamy

Same size gametes

Oogamy

Ovule larger than sperm

Data for phylogenetic tree (from where?)

Morphology/DNA

Formation of stalk in plant species advantages

Elevation from substrate and wind dispersion of propagules

Cambrian

Sharp increase in invertebrate fossils

Silurian
First land plants, land invertebrates

Devonian

Rise of fishes, first land vertebrates

Origin of plants (when?)

430mya

Plants vascular lineage (when?)

Early Devonian, 390mya

Seed lineage (when?)

Late Devonian, 360mya
Flower Lineage (When?)

Early Cretaceous, 130mya

AGNATHANS

Lamprey

OSTRACODERMS

Shell-Skinned Fishes

PLACODERMS

Armored Fishes

CHONDRICHTHYES

Shark

ACANTHODIANS

Spiny Fishes

OSTEICHTHYES

Ray-finned fishes, lobe-finned fishes

Ray-finned fishes (example)
Perch

Lobe-finned fishes (example)

Coelacanth

Pennsylvanian

Early Reptiles

Mississippian
Dev. Amphibians and insects

Acanthostega

Spends most of its life on water, can venture on to land, eight toes

Jurassic

Giant dinosaurs, first birds

Cretaceous

1st flowering plants, exctinction of dinosaurs

Paleocene

Radiation of primitive mammals

Hox Genes

Genes for body development, used all over body

Cambrian Explosion Causes

Geological Conditions, O2 Levels, Predator-Prey Relationship, Dev. Tool kit for gene

Parazoa description

Marine, asymmetrical, no true tissues

Lophotrochozoa

United by presence of Lophophore, set of ciliated tentacles around the mouth

Plants evolved how?

From Green Algae (Aquatic Seaweed)

Bryophytes (what are they?)

Simplest land plants, limited to moist environments

Three evolutionary changes that allowed plants to move onto land

Reduction in size of gametophyte, evolution of easily dispersible pollen, encasement of spores in seeds

Gymnosperms (Characteristics)

Naked-seed, Non-Flowering, Seeds hidden within cones, Seeds not enclosed in fruit, double fertilization

Angiosperms (Charcteristics)

Flowering Plants, seeds enclosed in ovary, seeds enclosed by protective fruit

Fungi Cell walls made from what?

Chitin

Fungi feeding

Absorb nutrients from substrate, realease digestive enzymes, soak up org. molecules

Two types of changes in Chromosome number

Number of entire sets of chromosomes, numbers of single chromosomes within set

Repetitive Doubling (what is it?)

Polyploidy

Transposons

Produce Transposase Enzyme

Evo-Devo

Understand how genes interact with environment during dev. & how this affects the way evolution works

Genetic Inheritance (direction)

Mainly vertical

Epigenetic Inheritance (Direction)

Only Vertical

Parental Inheritance (Direction)

Only Vertical

Ecological Inheritance (Direction)

Mainly vertical with some divergence

Cultural Inheritance direction

Any direction

Directional Evolution Example

Animal/Plant breeders who select for extremes of yield

Natural Selection Conditions

Increase in number of individuals in a species, competition for limited ressources, surival of the few

Three types of species

Biological, Morphospecies, Phylogenetic

Biological Species Advantage

Species defined on basis of criterium important for their evolution (reproductive isolation)

Biological Species Disadvantage

Exceptions exists, too much time needed to test

Morphospecies Concept

Composed of Phenotypically Similar Individuals

Morphospecies concept advantages

Can be applied more easily

Morphospecies Disadvantages

Requires Arbitrary decision, some distantly related species similar in appearance

Agamaospecies

Based on genetic similarities

Phylogenetic Species Concept

Groups defined by unique characters that no other groups possess (i.e. DNA)

Phylogenetic Concept Advantages

Focuses on operationally defining species

Phylogenetic Concept Disadvantages

Method used = big effect on outcome, history of different genes= different results `

Allopatric Speciation Steps

Geographic Isolation, Local Adaptation, Reproductive Isolation

Sympatric Speciation

Happens without geographic isolation

Sympatric Speciation Example

Plant Polyploidy

Geo. Isolation

Species in diff. places

Ecological Isolation

Species utilize different ressources in habitat

Behavioral Isolation

Species have different mating rituals

Temporal Isolation

Mating/Flowering @ different seasons/times of day

Mechanical Isolation

Structural Difference prevent mating or pollen transfer

Living Fossils Examples

Lingula/Horseshoe crab

Decline of CO2 concentration in second atmosphere (caused by what?)

Absorption by Oceans, reaction with silicates in rocks

Sources of energy for chemoautotrophs

H2, H2S, NH4+, Fe(II)

Spriggina

Ediacran Bioata, Plant or Animal
Dickinsonoia

Ediacran Biota, possible jellyfish

Anomalocaris

Burgess Shale Fauna, possible predatory arthropod

Opabinia

Burgess Shale Fauna, possible predatory arthropod

Wiwaxia

Burgess Shale Fauna, possible polychaete worm
Pikaia
Burgess Shale Fauna, Early Chordate

Ecydsozoa

Molting: Nematodes and Arthropods

Deuterostomia

Echinoderms

Amine Oxidases

Mammalian Copper Dependent Enzymes, Oxidative Deamination

Ceruloplasmin

Mammalian Copper Dependent Enzyme, Iron Oxidation