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277 Cards in this Set

  • Front
  • Back
How many amino acids make up mammalian proteins?
20
How do amino acids connect to make proteins?
Peptide bonds
What is the basic structure of an amino acid?
Amino group + Carboxylic acid group
What are the four classes of AA side chains?
Nonpolar
Uncharged polar
Acidic
Basic
What AA have nonpolar side chains?
Tryptopham
Proline
Isoleucine
Methionine
Phenylalanine
Valine
Alanine
Glycine
Leucine
What AA have uncharged polar side chains?
Tyrosine
Threonine
Glutamine
Asparagine
Cysteine
Serine
What AA have acidic side chains?
Aspartic acid
Glutamic acid
What AA's have basic side chains?
Histidine
Arginine
Lysine
What are the essential AA's?
Methionine
Isoleucine
Leucine
Lysine
Trypotophan
Threonine
Histidine
Valine
Phenylalanine
What is the Henderson-Hasselbalch equation?
pH= pKa + log (A-/HA)
How does the Henderson Hasselbalch equation pertain to AA's?
when pH is greater than the pKa the carboxyl group loses its proton (COO-); at pH values less then the pKa, the amino group gains a proton
What is physiologic pH?
7.35-7.45
What is acidotic?
Less than 7.35
What is alkalotic pH?
Greater than 7.45
For AA's with uncharged side chains, what is their overall charge?
Neutral at physiologic pH (COO- and NH3+)
At acidic pH, what is the charge of an AA with an uncharged side chain?
Positive (NH3+)
At alkalotic pH, what is the charge of an AA with an uncharged side chain?
Negative (COO-)
What are 3 characteristics of the peptide bond?
1. Lack rotation around the bond
2. Planar
3. Uncharged, but polar
What does primary structure of a protein mean?
Linear sequence of AA's
What is the secondary structure of a protein?
Regular arrangement of AA's (3D structure)
What are the 2 most common types of secondary protein structures?
Alpha Helix
Beta Sheet
2 proteins in the body that are primarily alpha helical?
Hgb
Keratin
2 properties of an alpha helix?
Stabilized by H-bonds
Each turn of helix contains about 4 AA's
Which AA's disrupt an alpha helix?
Proline (kink)
Charged AA's (basic/acidic)
Bulky (Tryptophan)
Branch at beta C (Valine, Isoleucine)
What is the difference between alpha helix and beta sheet?
Alpha helix has one peptide chain (beta has 2 or more)
What are the forms that a beta sheet can take on?
Parallel
Anti-parallel
Which beta sheet form gives more stability?
Anti-parallel
Name a protein like structure composed of beta sheets?
Amyloid
In what disease processes is amyloid deposited within the body?
Alzheimer
Downs
Chronic Hemodialysis
What does tertiary structure of a protein mean?
Interactions of primary sequence
Name 4 types of interactions that cooperate in stabilizing the tertiary structure of a protein?
1. van der Waals
2. Hydrophobic
3. H bonds
4. Ionic
What is the quaternary structure of a protein?
Arrangement of many subunits in a protein (dimeric)
What is the quaternary structure of Hgb?
Heterotetramer (4 globular subunits)
What is protein denaturation?
Unfolding and disorganization (secondary and tertiary disrupted)
What causes denaturation of a protein?
Heat
Organic solvents
Acid/bases
Heavy metals
What are the two most abundant hemeproteins in humans?
Hemeglobin
Myoglobin
What is the difference between Hgb and myoglobin?
Hgb made up of 4 subunits and less affinity for O2 (myoglobin has 1 subunit)
What is heme?
Complex of protoporphyrin IX and Fe2+
What enzyme catalyzes the rate limiting step of heme synthesis?
Aminolevulinate (ALA) synthase
How does lead cause microcytic, hypochromic anemia and porphyria?
Inhibits ALA synthase and ferrochelatase
What is methemooglobin?
Hgb with iron oxidized to 3+
(cannot bind O2)
What are common causes of methemoglobin production?
Environmental agents (nitrates)
Pharmaceuticals (local anesthetics)
Metabolic Def (methemoglobin reducatase def)
What reduces methemoglobin (Fe3+) to Hgb (Fe2+)?
NADH-methemoglobin reductase
Why is methemoglobin used to prevent cyanide poisoning?
Avidly bind cyanide ion (CN-) so sequesters it
Where is myoglobin often present in the body?
Heart and skeletal muscle
Where in the body is Hgb found?
RBCs only
What is the function of Hgb?
Transport O2 from the lungs to the caps of body tissues
What are the main types of Hgb??
Hgb A
Hgb F
Hgb A2
Hgb S
Hgb C
What does Hgb F consist of?
Two alpha chains
Two gamma chains
What are the 2 forms of Hgb?
Taut (deoxy)
Relaxed (oxy)
What does cooperative binding mean in regard to Hgb?
Binding of O2 at one heme group inc the O2 affinity of the remaining heme groups
Does myoglobin bind O2 in the same way that Hgb does?
No cooperative binding in myoglobin (1 subunit)
What is the significance of the sigmoidal shape of O2 dissociation curve?
Allows Hgb to carry and deliver O2 efficiently from site of high O2 to sites of low O2
What is the significance of the plateau portion of the curve?
Pul caps, where O2 binds readily to Hgb
What is the significance of the steep portion of the curve?
Systemic caps, where O2 is unloaded to tissues efficiently
What does a R shift in the O2 dissociation curve signify?
Improved O2 delivery to tissues
What does a L shift in the O2 dissociation curve signify?
Improved O2 extraction in the lungs
What variables shift the Hgb oxygen dissociation curve to the R?
Inc CO2
Dec pH
Inc 2,3-DPG
Inc Exercise
Inc Temp
How is the CO2 carried in the body?
Transported as bicarb ion
Carbamate bound to Hgb
What reaction does carbonic anhydrase catalyzae?
CO2 + H2O -> HCO3- + H+
What is the Bohr effect?
H+ conc on the affinity of Hgb O2
How is the Bohr effect significant in O2 transport?
pH is high in the lungs: Hgb high affinity for O2
pH is low in the tissues: Hgb low affinity for O2
Where is 2,3-BPG created?
In glycolysis cycle from 1,3-BPG to 3-Phosphoglycerate
Does fetal Hgb or adult Hgb have a higher affinity for O2?
Fetal (dissociation curve shifted to the left)
What are the minor forms of Hgb?
Hgb A2
Hgb A1c
What disease process is Hgb A1c important in?
DM (glucose glycosylates Hgb)
What are hemoglobinopathies?
A family of disorders- structurally abnormal Hgb, synthesis of insufficient quantities of Hgb, both
What are the constituents of sickle cell Hgb?
Two normal alphas and two mutant beta globin chains
What is the mutation of the beta-globin chain in sickle cell Hgb?
Glutamate replaced by valine (position 6)
What happens when RBCs sickle?
Deform and block the flow of blood in capillaries (anoxia)
What are some complications of sickle cell anemia?
Aplastic crisis (parovirus B19)
Autosplenectomy
Vaso-occlusive painful crisis
Splenic sequestration crisis
Avascular necrosis of the femoral head
Sickle cell anemia is more prevalent in what ethnic group?
African Americans
What findings do you see on x-ray in individuals with sickle cell anemia?
Crew cut (due to marrow expansion)
Fish vertebral bodies
What are some variables that increase the sickling of RBCs?
Dec O2
Inc CO2
Dec pH
Inc 2,3-BPG
Dehydration
Sickle cell heterozygotes have an advantage over nonsickle individuals in the presentation of what disease?
Malaria
Name some potential treatments for individuals with sickle cell anemia?
Hydroxyurea (inc Hgb F)
BM transplant
Hydration
O2
What mutation causes Hgb C?
Beta globin chain (glutamate is replaced by lysine) at position 6
What mutation produces Hgb SC?
One beta globin gene has sickle cell mutation and the other has C disease mutation (painful crisis milder than SS)
What is the common complication of Hgb SC disease?
DVTs
What are thalassemias?
hereditary hemolytic disease in which an imbalance in the synthesis of globin chain occurs
What is an alpha thalassemia?
alpha globin chain is dec or absent (less than 4)
How many different types of alpha thalassemias are there?
4
What are the different types of alpha thalassemia?
Silent carrier (1 of 4)
Alpha thalassemia trait (2 of 4)
Hgb H dx (3 of 4)
Hgb Bart/Hydrops fetalis (4 of 4)
What is beta thalassemia?
Synthesis of beta globin chain is dec (less than 2)
How many different types of beta thalassemia are there?
2
What are the different types of beta thalassemia?
Minor (1 of 2)
Major (2 of 2)
In what geographical regions is alpha thalassemia most prevalent?
Asia and Africa
In what geographic region is beta thalassemia most prevalent?
Mediterranean
What type of Hgb is increased in beta thalassemia?
Hgb F
What is the treatment for beta thalassemia major?
Blood transfusions
What is the complication of blood transfusions in beta thalassemia?
Cardiac failure bc of secondary hemochromatosis
Characterize the anemia associated with thalassemia?
Microcytic hypochromic anemia
What sign on x-ray is indicative of thalassemia?
Crew cut
Name the CT proteins found throughout the body?
Collagen
Elastin
Keratin
What are the CT proteins located in the body?
Collagen and elastin are in sclera, cornea, and bv walls
Keratin is in skin and hair
What is the most abundant protein in the body?
Collagen
What is the structure of collagen?
Three polypeptides (alpha chains) in a triple helix
What is the sequence of AA in the triple helix of collagen?
Gly-X-Y
(X and Y can be proline, hydroxyproline, or hydroxylysine)
What vitamin is required for the synthesis of collagen?
Vit C (hydroxylation)
Def of Vit C is referred to as what dx?
Scurvy
Name common physical findings ass. with Scurvy?
Swollen gums
Easy bruising
Anemia
Poor wound healing
Weakness
How is collagen synthesized?
Prolyl and lysyl residues are hydroxylated via prolyl hydroxylase in the ER (procollagen) in extracellular space procollagen is cleaved to tropocollagen which aggregates to fibrils
What characteristic linkage reinforces the structure of collagen?
Covalent cross linking of Lys and hydroxylys
Where is collagen type I located?
Bone
Tendon
Skin
Dentin
Fascia
Cornea
Where is collagen type II located?
Cartilege
Vitreous body
Nucleus Pulposus
Where is collagen type III located?
Reticulin fibers (skin)
BV
Uterus
Fetal tissue
Granulation tissue
Where is collagen type IV located?
Basement memebrane
Where is collagen type X located?
Epiphyseal plate
Name 3 dx which result in dysfunctional collagen synthesis?
Scurvy
Ehlers-Danlos
OI
Name several signs of Ehlers-Danlos?
Hyperextensible skin
Tendency to bleed (bruise)
Hypermobile joints
What significant vascular pathology is ass. w Ehlers Danlos?
Intracranial berry aneurysms
What is the most common mode of inheritance for OI?
Auto Dom
What are some signs and symptoms of OI?
Multiple fractures
Blue sclerae
Hearing loss (middle bone malform)
Dental probs
OI may often be confused with what suspicion?
Child abuse
Which type of OI is fatal?
Type II
What autoimmune dx is due to antibodies against the basement membrane?
Goodpasture
Describe the clinical manifestations of Goodpasture?
Lungs-coughing blood, diff breathing
Kidneys-hematuria, burning urniation
What genetic disorder prevents the proper production of the basement membrane?
Alport
Describe the clinical manifestations of Alport?
Kidneys- nephritis and hematuria
Ears- hearing loss
Eyes- ocular lesions
Which serum protein inhibits elastin degradation?
alpha-1-antitrypsin (inhibits neut elastase)
Where is alpha-1-antitrypsin produced?
Liver by monocytes and macrophages
What dx are ass. w alpha-1-antitrypsin deficiency?
Emphysema
Liver damage (cirrhosis, cholestasis)
What are enzymes?
Protein catalysts that inc the rate of chem rxn wo being altered in the process
6 properties of enzymes?
AS
Catalytic
Substrate specific
Uses cofactors
Activity can be regulated
Located in specific areas
Does the enzyme change the chemical equilibrium of a rxn?
No (faster by dec energy of activation)
Name the factors that can affect the rate of enzymatic catalysis of an enzyme?
Substrate conc
pH
Temp
What is the effect of temp on the rxn velocity?
Inc with temp until a peak velocity is reached and then declines
What is the effect of substrate conc on rxn velocity?
Inc with inc substrate conc until max velocity is reached
What is V max?
Max velocity at which an enzyme can catalyze a rxn
What is the effect of pH on enzymatic activity?
Extremes denature
Preference of ionized and unionized state of specific enzymes and substrates
What is the Michaelis-Menton equation?
Vi= Vmax(Sub conc)/(Km+sub conc)
What does the Michaelis-Menten equation represent?
Relationship between initial rxn velocity and sub conc
What are the three assumptions of the Michaelis-Menten equation?
Sub conc is greater than enzyme conc
ES does not change with time
Only initial velocities are assumed
What is Km?
It is equal to the substrate conc at which the reaction velocity is equal to 1/2 Vmax
What does a small Km imply?
High affinity of the enzyme for the substrate
What does a large Km imply?
Low affinity of the enzyme for the substrate
Does hexokinase have a large or small Km?
Low Km (in most tissues)
Does glucokinase have a large or small Km?
High Km (liver and pancreas)
What is meant by the term 0 order reaction?
Velocity of reaction is constant and independent of substrate conc.
What enzymes showcase zero order reaction kinetics?
Alcohol dehydrogenase
What is meant by the term first order reaction?
The reaction is directly proportional to the amount of substrate (linear relationship)
How does a competitive inhibitor inhibit an enzymatic reaction?
Competes with substrate for AS on an enzyme
Can the effect of a competitive inhibitor be overcome by increasing the amount of substrate?
Yes
What is the effect of a competitive inhibitor on the Michaelis-Menten equation?
Inc apparent Km
(Vmax constant)
How does a noncompetitive inhibitor inhibit an enzymatic reaction?
By binding to an allosteric site
Can the effect of a noncompetitive inhibitor be overcome by increasing the amount of substrate?
No
What is the effect of a noncompetitive inhibitor on the Michaelis-Menten equation?
Dec Vmax
(Km constant)
How does a mixed inhibitor inhibit an enzymatic reaction?
By binding to an allosteric site outside of the AS
What is the effect of a mixed inhibitor on the Michaelis-Menten equation?
Inc Km
Dec Vmax
How does an uncompetitive inhibitor inhibit an enzymatic reaction?
By binding to the ES complex at the allosteric site
What is the effect of an uncompetitive inhibitor on the Michaelis-Menten equation?
Both Vmax and Km change
Which is the only class of inhibitors that binds to the enzymatic AS?
Competitive Inhibitors
What is the treatment for ethylene glycol poisoning?
Ethanol (competitive inhibitor of alcohol dehydrogenase)
Fomepizole
What can be a manifestation of ethylene glycol poisoning?
Kidney failure (oxalate crystallizes)
What is the treatment for methanol poisoning?
Ethanol (competitive inhibitor of alcohol dehydrogenase)
What can be an early manifestation of methanol poisoning?
Blindness (optic neuropathy bc of formaldehyde and formic acid)
Name the methods the body uses to regulate enzyme activity?
Allosteric reg
Covalent modification
Cofactors
Induction/repression of enzyme synthesis
Describe the mechanism behind allosteric regulation?
An effector binds to the enzyme at an allosteric position that alters the activity of the enzyme
Allosteric regulation of enzymatic activity is ass. with what type of substrate-velocity curve?
Sigmoidal (positive cooperation)
What is the effect of a positive effector on the Michaelis-Menten equation?
Dec Km (inc affinity)
What is the effect of a negative effector on the Michaelis-Menten equation?
Inc Km (dec affinity)
What is meant by the term homotropic effector?
Substrate itself serves as an effector
What is meant by the rem heterotropic effector?
The effector is a molecule other than the substrate
Describe the mechanism behind covalent modification.
Bond another molecule to the enzyme to alter the enzymes activity (usually phosphate groups)
Describe the effect of covalent modification on the activity of glycogen phosphorylase and glycogen synthase?
Glycogen phosphorylase inc activity
Glycogen synthase dec activity
Name several enzymes whose activity is mostly altered via the induction or repression of enzyme synthesis?
Cytochrome P450
Glycolytic enzymes
HMG-CoA reductase
What is a cofactor?
Small molecule essential for the action of an enzyme
List several enzymes that utilize cofactors?
Pyruvate Dehydrogenase
Alpha Ketoglutarate Dehyrdrogenase
Pancreatic lipase
What symptoms are ass. with PKU?
Inc phenylalanine causes mental retardation, impairment of brain development, fair skin, eczema, musty body odor
What is the enzyme disturbance in PKU?
Dec phenyalanine hydroxylase
Dec BH4
(Dec producation of tyrosine)
What substances are found in inc amounts in the urine of those with PKU?
Phenylketones (phenyllactate, phenylpyruvate, phenylacetate)
When is PKU screened?
At birth
PKU is inherited in what pattern?
Auto Rec
What is the treatment for PKU?
Dec Phe and Inc Tyr in the diet
What is maternal PKU?
Mother's uncontrolled hyperphenylalaninemia leads to mental retardation and defects of the fetus at birth (organogenesis 3-8 wks)
Describe the pathophysiology behind maple syrup urine disease?
Degradation of branched AA's (Isoleucine, leucine, valine) is blocked (alpha ketoacids in the blood inc)
What is the deficient enzyme in maple syrup urine disease?
Branched chain keto-acid dehydrogenase (thiamine cofactor)
What are the symptoms of maple syrup urine disease?
Mental retardation
Edema
White matter demyelination
Hyperglycemia
Death
What is the pathophysiological processes that can result in albinism?
Def of tyrosinase
Defective tyrosine transporters
Lack of NCCs migration
What is the role of tyrosinase?
Tyrosine to melanin
What is the role of melanin?
Pigment
Which important pathology is ass. w dec melanin?
Inc susceptibility to sunburns (squamous cell carcinoma)
Describe the pathophysiology behind homocystinuria?
Defective cystathionine synthase or methionine synthase
Describe the two forms of homocystinuria?
Def cystathionine or methionine synthase
Dec affinity for PLP (B6)
What is the treatment for homocystinuria?
Inc cysteine and dec methionine in the diet
Inc B6 (PLP)
What are the symptoms of homocystinuria?
Marfan-like body
Mental retardation
Osteoporosis
Thrombolytic episodes
What physiological defect is found in cystinuria?
Defective renal tubular AA transporter for Cystine, Ornithine, Lysine, and Arginine
What are the major symptoms ass. w cystinuria?
Cystine stones in the kidneys (yellow-brown)
What is the treatment for cystinuria?
Acetazolamide (alkalinize urine)
What is the deficient enzyme in alkaptonuria?
Homogentistic acid oxidase
Most common genetic error of AA transport?
Cystinuria
Homogentistic acid oxidase is utilized in the degradation of which AA?
Tyrosine
What are the symptoms of alkaptonuria?
Dark urine and CT (onchronosis)
Rarely athralgias
What causes urine and CT to be dark in alkaptonuria?
Homogentistic Acid accumulates forming polymers
What is deficient in cystathioninuria?
Cystathionase
What reaction does cystathionase catalyze?
Formation of cysteine and alpha ketobutyrate from cystathionine
What is the deficient enzyme in histidinemia?
Histidase
What reaction does histidase catalyze?
Histidine to urocanate
What are the symptoms of histidinemia?
Often asymptomatic, may have mental retardation
Describe the pathophysiology behind histidinemia?
Inc levels of histidine in the urine and blood
What is the inheritance pattern of histidinemia?
Auto Rec
What type of emphysema is ass w. alpha 1 antitrypsin def?
Panacinar
What are the 3 major classes of carbs?
Monosaccharides
Dosaccharides
Polysaccharides
What is the simplest carb?
Monosaccharide
What is the major fuel source for the brain?
Glucose
What are the major metabolic pathways of the brain?
Glycolysis
AA metabolism
What cells do not contain mitochondria and thus rely only on glycolysis for E production?
Erythrocytes
What type of tissue stores, synthesizes, and mobilizes TGs?
Adipose tissue
Which metabolic pathway does fast twitch muscles use for fuel?
Glycolysis
Which metabolic pathway does slow twitch muscles use for fuel?
TCA cycle
Beta oxidation
Name the family of glucose carrier proteins that transport glucose into the cell?
GLUT
What glucose transporter is used by the liver?
GLUT 2
What glucose transporter is used by muscle?
GLUT4
Which one of the glucose transporters is sensitive to insulin?
GLUT4
What is the mechanism of action of insulin on GLUT4?
Facilitates movement of the transporter to the cell membrane
What glucose transporter is located on the brush border membrane of both intestinal and kidney cells?
GLUT2
GLUT2 is coupled to the transport of what ion to provide E for glucose transport?
Na+
In most tissues, glucose is trapped in the cell by phosphorylation by what enzyme?
Hexokinase
What inhibits hexokinase?
Feedback inhibition by its product glucose-6-ph
In the liver, glucose is phosphorylated by what enzyme?
Glucokinase
What is the major distinction between hexokinase and glucokinase?
Glucokinase has a higher Km
Does glucokinase or hexokinase prevent hyperglycemia following a carb-rich meal?
Glucokinase
Which two organs express glucokinase?
Liver
Pancreas
Describe the kinetics of glucokinase?
High Km and high Vmax
No feedback inhibition by gluc-6-ph
Describe the kinetics of hexokinase?
Low Km and low Vmax
Feedback inhibition by gluc-6-ph
What is the effect of insulin on glucokinase?
Induces synthesis of glucokinase
Name two functions of glycolysis?
Degrade glucose to generate ATP
Provide building blocks for other rxns
How much ATP is consumed per mole of glucose that undergoes glycolysis?
2 moles
How much ATP is generated per mole of glucose that undergoes glycolysis?
4 moles
What is the net generation of ATP per mole of glucose that undergoes glycolysis?
2 moles
What is the major regulatory enzyme in glycolysis?
Phosphofructokinase I (PFK-1)
Name the 3 enzymes of glycolysis that catalyze virtually irreversible reactions?
Hexokinase
PFK-I
Pyruvate kinase
What reaction does PFK-I catalyze?
Fructose-6-Ph-->Fructose 1,6-bisphosphate
Name the positive allosteric regulator of PFK-I
AMP
Fructose-2,6-bisphosphate
Name allosteric inhibitors of PFK-I
Citrate
ATP
What reaction does PFK-II catalyze?
Fructose-6-Ph-->Fructose-2,6-bisphosphate
In what organ is PFK-II not regulated by phosphorylation?
Muscle
Is the activity of PFK-II a sign of a fed or fasting state?
Fed
Which 2 glycolytic intermediates liberate enough energy for driving ATP synthesis?
3-phosphoglycerate kinase
Pyruvate kinase
Pyruvate kinase catalyzes what reaction?
PEP-Pyruvate
What covalent modification inhibits pyruvate kinase?
Phosphorylation
What enzyme allosterically inhibits pyruvate kinase by phosphorylating it?
Protein kinase A
Allosteric inhibitors of pyruvate kinase?
ATP
Acetyl CoA
Alannine (in liver only)
Name the allosteric activator of pyruvate kinase?
Fructose-1,6-bisphosphate
What are the signs of pyruvate kinase deficiency?
Anemia
Reticulocytosis
Inc 2,3-BGP
How is pyruvate kinase disorder inherited?
Auto Rec
What is the most effective treatment for pyruvate kinase deficiency?
Exchange transfusions
Which enzyme produces NADH in glycolysis?
Glyceraldehyde-3-phosphate dehydrogenase
How much NADH is produced per mole of glucose oxidized to pyruvate?
2
Since erythrocytes do not contain mitochondria, what is the NADH produced in glycolysis used for?
To reduce pyruvate to lactate
How is the reducing power of NADH transferred to the mitochondria?
Glycerol-3-Phosphate Shuttle
Malate Aspartate Shuttle
What are the possible fates of pyruvate produced in the cell?
Lactate
Alanine
Acetyl CoA
OAA
Glucose
How many moles of ATP are required to generate glucose from pyruvate?
6 moles
Under anaerobic conditions, pyruvate is converted to what molecule?
Lactate
What enzyme catalyzes pyruvate-->lactate?
Lactate Dehydrogenase
What are the 3 enzymes of the pyruvate dehydrogenase complex?
Pyruvate decarboxylase
Dihydrolipoyl transacetylase
Dihydrolipoyl dehydrogenase
What reaction does the pyruvate dehydrogenase complex catalyze?
Pyruvate + NAD+ +CoA-->Acetyl CoA + CO2 + NADH
What coenzymes are required by pyruvate dehydrogenase complex?
Thiamine (B1)
FAD (B2)
NAD+ (B3)
Coenzyme A (B5)
Lipoic acid
The pyruvate dehydrogenase complex is similar to what other enzyme?
Alpha-ketoglutarate dehydrogenase complex
Is the pyruvate dehydrogenase complex active in the phosphorylated or nonphosphorylated state?
Nonphosphorylated
What enzymes phosphorylates the pyruvate dehydrogenase complex?
PDH kinase
What molecules activate PDH kinase (inhibit PDH complex)?
Acetyl CoA
NADH
What molecules inhibit PDH kinase (activate PDH complex)?
Pyruvate
Dec levels of ADP
What enzyme dephosphorylates the PDH complex?
PDH pohphatase
What molecule activates PDH phosphatase (activating PDH complex)?
Ca2+
What are the major manifestations of PDH deficiency?
Lactic acidosis
Neurological manifestations
What is the treatment for PDH deficiency?
Inc intake of ketogenic nutrients
For each Acetyl CoA through the TCA cycle, how many NADH are produced?
3
For each Acetyl CoA through the TCA cycle, how many FADH2 are produced?
1
For each Acetyl CoA through the TCA cycle, how many CO2 are produced?
2
For each Acetyl CoA through the TCA cycle, how many GTP are produced?
1
How much ATP is produced per acetyl CoA pushed in the TCA cycle?
12
What reaction does citrate synthase catalyze?
OAA + Acetyl CoA --> Citrate
The presence of what molecule inhibits citrate synthase?
ATP
What reaction does isocitrate dehydrogenase catalyze?
Isocitrate + NAD+ --> alpha-ketpglutarate + CO2 + NADH
What molecules inhibit isocitrate dehydrogenase?
ATP, NADH
The presence of what molecule activates isocitrate dehydrogenase?
ADP