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12 Cards in this Set

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RNA Pol II promoters

can be very complex = a core promoter(~50 bp upstream of +1) plus a regulatory promoterregion further upstream plus enhancers.

spliceosome

huge complex in thenucleus composed of manyribonucleoprotein particles calledsnRNPs

eukaryotic RNA processing

1. Addition of 5’ cap = 7-methyl guanosine2. Formation of 3’ end by cleavage and poly-A addition3. Removal of introns and ligation of exons = mRNA splicing

5’ end cap function

acts as a binding site for the ribosomeduring initiation of translation; stabilizes mRNAs.

3’ poly(A) tail function

regulates stability of mRNAs afterthey enter the cytoplasm; affects transport of mRNAs out ofthe nucleus; facilitates ribosome binding to the 5’ cap.

introns

have roles in gene and genome evolution;create the opportunity for alternative splicing

aminoacyl-tRNAsynthetase

attaches the correct amino acid to the3’ end of a specific tRNA (tRNA charging)

peptidyl transferase

RNA enzyme that catalyzes peptide bond formation

histone deacetylase (HD)

removes acetyl groups from histones - induces tight chromatin structure and prevents transcription

histone acetyl transferase (HAT)

acetylates histones to open up nucleosome (chromatin) structure, allowing transcription to occur

Enhancer DNA sequences

contain thebinding sites for activator transcription factors(= response element sequences)

Insulator DNA sequences

limit the effects of enhancer regionsto a restricted region of the chromosome = just the gene theyare “meant” to affect.