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75 Cards in this Set

  • Front
  • Back

3 classes of macromolecules

Proteins


Lipids


Carbohydrates

What is the fourth class of macromolecules

Nucleic acids

What are nucleic acids composed of

Monomers called nucleotides

Nucleotides are

Polymerized to form large stands

Base sequence

Each nucleic acid strand contains certain molecules that appear in a certain order within the strand

The base sequence of DNA is responsible for

Carrying and retaining the hereditary information in a cell

DNA stands for

Deoxyribonucleic acid

Building blocks of nucleic acid

Nucleotides

Deoxyribonucleotides

Nucleotides that compose DNA

Three components of a deoxyribonucleotide

Deoxyribose


Phosphate group


Nitrogenous base

Five carbon sugar in DNA

deoxyribose

How are the 5 carbon deoxyribose numbered

1' (prime)


2'


3'


4'


5'

A nucleoside comprises

The five carbon sugar and nitrogenous base

Deoxyribonucleotide is named according to

The nitrogenous bases

Purines

Adenine


Guanine

Pyrimidines

Cytosine


Thymine

What type of ring structure so purines have?

Double ring structure with a 6 carbon ring fused to a five carbon ring

What type of ring structure do pyrimidines have

Only a six carbon ring structure

Which ones are smaller nitrogenous bases

Pyrimidines

Which base is unique to DNA

Thymine

Sugar-phosphate backbone

The alternating Sugar-phosphate structure composing the framework of a nucleic acid strand

What are used during the polymerization process

Deoxynucleotide triphosphates (dNTP)

How to construct sugar-phosphate backbone step 1

The two terminal phosphates are released from dNTP as a phorphosphate.

How to construct a sugar-phosphate step 2

The resulting strand of nucleic acid has a free phosphate group at the 5' carbon and a free hydroxyl group at 3' carbon

How to construct sugar-phosphate backbone step 3

The two unused phosphate groups from the nucleotide triphosphate are released as pyrophosphate during phosphodiester bond formation

During which formation and the two unused phosphates released. What are the released as

During phosphodiester bone formation as pyrophosphate

What happens to the pyrophosphate when it is released

It is hydrolyzed and releases energy used to drive nucleotide polymerization

Watson and Crick proposed

That DNA is made up of two strands that are twisted around each other to form a right handed helix

The two DNA stands are

Antiparallel

Antiparallel

The 3' end of one stand faces the 5' end of the other

What form the backbone

The sugar and phosphate of the polymerized nucleotides

What are stacked inside of DNA

Nitrogenous bases

Base pairing

The nitrogenous bases on the interior of the molecule interact with each other

How many bases per turn in DNA

About 10 bases

What makes major grooves

Asymmetrical spacing of the


sugar-phosphate backbones.


Backbone is far apart

What makes minor grooves

Backbone is close together

The grooves are

Locations where proteins can bind to DNA

The binding of these proteins can

Alter the structure of DNA


Regulate replication


Regulate transcription of DNA into RNA

Base pairing takes place between

A purine and pyrimidine

Complementary base pairs

Adenine (A)


Thymine (T)



Cytosine (C)


Guanine (G)

Base pairs are stabilized by

Hydrogen bonds

How many and what type of bonds are formed between A & T

Two hydrogen bonds between A&T

What kind and how many bonds are formed between C & G

Three hydrogen bonds between C&G

What can break the hydrogen bonds between complementary bases

Exposing the two strand of the double helix to high temperatures or to certain chemicals

DNA denaturation

Separating the strands into two separate single strands of DNA

ssDNA

Single stranded DNA

DNA denaturation is analogous to

Protein denaturation

How can ssDNA be put back together

Through annealing or renaturing by cooling or removing the chemical denaturants, allowing the hydrogen bonds to reform

DNA stores information needed

To build and control the cell

Vertical gene transfer

The transmission of stored information from mother to daughter cells

What process does vertical gene transfer use

DNA replication

DNA replication

DNA is replicated when a cell makes a duplicate copy of its DNA


The cell divides


Results in the correct distribution of one DNA copy to each resulting cell

What role does DNA not serve

Does not serve a structural role in cells

RNA stands for

Ribonucleic acid

Ribonucleic acid

Similar to DNA, but RNA molecules are much shorter and are typically one stranded

What process is RNA mainly a part of

The process of protein synthesis (translation) and it's regulation

RNA is typically

Single stranded and made of ribonucleotides

What are ribonucleotides linked by

Phosphodiester bonds

What does a ribonucleotide in the RNA chain contain

Ribose (the pentose sugar)


One of the four nitrogenous bases


And a phosphate group

Pentose sugar

Ribose

RNA nitrogenous bases

Adenine


Uracil (replaces Thymine in DNA)



Cytosine


Guanine

DNA compared to RNA

The subtle structural difference between the sugars gives DNA added stability, making it more suitable for storage of genetic information. The relative instability of RNA makes it more suitable for its more short term functions

RNA specific prymidine

Uracil

Uracil

Forms a complementary base pair with adenine

Even though RNA is single stranded most types show

Extensive intramolecular base pairing between complementary sequences, which creates a predictable 3D structure

What is essential for RNA function

A three dimensional structure

Three main types of RNA

messenger RNA (mRNA)


ribosomal RNA (rRNA)


transfer RNA (tRNA)

Structure of mRNA

Short, unstable, single stranded RNA corresponding to a gene encoded within DNA

Function of mRNA

Serves as intermediary between DNA and protein; used by ribosome to direct synthesis of protein it encodes

Structure of rRNA

Longer, stable RNA molecules composing 60% of ribosomes mass

Function of rRNA

Ensures the proper alignment of mRNA, tRNA, and ribosome during protein synthesis; catalyzes peptide bond formation between amino acids

Structure of tRNA

Short (70-90 nucleotides), stable RNA with extensive intramolecular base pairing; contains an amino acid binding site and an mRNA binding site

Function of tRNA

Carries the correct amino acid to the site of protein synthesis in the ribosome

What viruses are composed of singled stranded RNA

Rhinoviruses

What viruses are composed of double stranded RNA

Rotaviruses