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24 Cards in this Set

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Examples of modified amino acids

Phosphoserine


Hydroxyproline


Hydroxylysine


Carboxyglutamic acid

Eight essential amino acids for humans

Tryptophan


Methionine


Valine


Threonine


Phenylalanine


Leucine


Isoleucine


Lysine

Describe primary protein sequence

Sequence of amino acids

Describe secondary protein sequence

Coils and folds resulting from H bond interactions between backbone

Describe tertiary protein structure

Interactions between side chains


Weak bonds - hydrogen


Strong bonds - disulphide bridges

Describe quaternary protein structure

Overall structure when 2 or more polypeptide chains interact

What do proteins become in the stomach?

Polypeptides

What do polypeptides become in the small intestine

Smaller polypeptides


Amino acids

Where are short peptides and amino acids absorbed?

Intestinal cells

Uses of protein in the human body per day?

Consume - 100g


Breakdown - 400g


Resynthesize - 400g


Excrete/catabolise -100g

What is the average protein lifespan?

Extensive variation days to minutes


Extracellular - rapid turnover


Structural - more stable

What are the 2 stages of amino acids?

1. The alpha amino group is removed and excreted


2. The C skeleton is broken down into metabolic intermediates


What is transamination?

The removal of alpha amino acid group. Produces glutamate


Reversible


Anergonic (no ATP)

What happens to the glutamate produced during transamination?

Undergoes a process called oxidative deamination which produces ammonia

What happens to ammonia?

Ureotelic organisms convert ammonia to urea


Removal correlates with species and habitat

Ammonotelic - in regards to nitrogen excretion

Require access to lots of H2O

Ureotelic - in regards to nitrogen excretion

Less H2O needed as toxicity decreases

Uricotelic

Uric acid is insoluble

Factors important to nitrogen excretion

Energy


Mode of reproduction


Habitat


Adaptation to environmental change

Where does the urea cycle occur?

The liver

Three cycles in amino acid biosynthesis?

Citric acid cycle


Glycolysis


Glycolysis and pentose phosphate pathway

What family does alpha ketoglutarate produce?


Examples

Glutamate family


Gln Pro Arg

What family does alpha ketoglutarate produce?


Examples

Glutamate family


Gln Pro Arg

What family does oxaloacetate produce?


Examples

Aspartate family


Asn Met Thr Lys