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41 Cards in this Set

  • Front
  • Back

What's a DNase I hypersensitive site

Its where chromatin is cleaved to relax its structure to makes DNA accessible (about 1 kilobase upstream of a transcriptionally active gene)

Histones...

Regulate gene expression by reducing the rate of transcription

Promoter

A DNA sequence located near the start of a gene that RNA polymerase binds to initiate transcription

Repressor

A transcription factor that prevents mRNA synthesis by binding to the operator of a gene

Insulator

A transcriptional element that blocks the signal between enhancers and promoters

Regulatory Gene

A gene that controls the expression of one or more genes by promoting or inhibiting transcription

Inducer

A small molecule that activates transcription by inhibiting the action of a repressor protein

Operator

A short sequence of DNA located near the promoter region that is recognized by repressor protein

What is more common in eukaryotes activators or repressors

Activators

What are transcription factors composed of

Amino acids

What do inducers do

Find activator proteins enhance the ability of the activator to bind DNA also allows transcription of specific genes.

What alternative RNA splicing do?

Determines which proteins are produced from each gene

miRNA AKA micro RNA

Caries information for the amino acid sequence of a protein

How can micro RNA's regulate gene expression

It can prevent translation by binding to mRNA and degrading the mRNA strand

How is an epigenetic change different from a mutation

A mutation Alters the nucleotide sequence in the DNA. An epigenetic change does not alter the DNA sequence but it can be inherited by daughter cells

Types of epigenetic modifications

Methylation, ubiquitylation, acetylation

What base is more likely be methylated in human DNA

Cytosine

Transcription

The process where the information in a strand of DNA is copied into a new molecule of messenger RNA

Translation

Where the protein is synthesized from the information contained in a molecule of mRNA

MRNA AKA messenger RNA

It carries the genetic message from the DNA in the nucleus to the protein-making Machinery in the cytoplasm

Which way does RNA primase go

And the five Prime end to 3 Prime

Sigma Factor

Controls The Binding of RNA polymerase to the promoter

Promoters

DNA sequences that tell RNA polymerase location to initiate RNA synthesis

Acetylation of histones

DNA can be used / loosened

Core promoters

For the general transcription factors and RNA polymerase bind basically always has a ta ta box

Regulatory promoter

Allow cells to express certain genes high levels in response to specific signals

Enhancers

DNA sequences that function to enhance transcription can be found anywhere in DNA

Collinearity

When the number of nucleotides in and she is proportional to the number of Amino acids in the protein mainly in bacteria and most viruses but not eukaryotes

MRNA

Template for protein synthesis

Primary structure

Amino of sequence of amino acids

Secondary structure

How polypeptide is coiled or folded

Tertiary structure

Overall 3 dimensional shape of the protein

Quaternary structure

Shape of the structure formed by interactions between different polypeptides

Synonymous codons

Codons that specify the same amino acid

Wobble

Base pairing rules are relaxed at the third position of a codon

Where do Amino acids bind to TRNA

3 Prime end

Where's the shine dalgarno sequence found

MRNA

Elongation

When amino acids are joined together

Histones

Small positively charged proteins and they bind to negatively charged phosphates of DNA

nucleosome

DNA wrapped around the histone octamer

DNA methylation

Makes it so DNA cannot be read