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43 Cards in this Set

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The three domains of life

Eukarya, (Animals, plants, protists, and fungi (yeasts and molds)



Bacteria,



Archaea

Nucleus related

4 Major groups of fungi

Chytridiomycota (primitive fungi)



Zygomycota (900 species; Rhizopus and Mucor)


Ascomycota (~half of all fungal species)includes


Basidiomycota (plant pathogens, macro fungi, puffballs, bracket fungi)


Glomeramycota (association w/ plant roots)


Important phyla of Bacteria to fermentation

Firmicutes

How bacteria are organized

Plyla


Class (subclass)


Order (Suborder)


Family


Genera

Nomenclature & how is ts writen


First is ________


second is ________

Genus (Capital italicized )


Species (italicized)

Microbial taxonomy and method of analysis (what are the methods)

Phenotipic Charecteristics (visual)



Molecular Techniques



Polyphasic taxonomy (both togeather)


Molecular techniques of analyzing organisims

Nucleic acid composition (mol% G + C)DNA-DNA hybridizationDNA-RNA hybridization16S rRNA sequencingRestriction Fragment Length Polymorphism (RFLP)Randomly Amplified Polymorphic DNA (RAPD)Pulsed Field Gel Electrophoresis (PFGE)DNA Microarray Technology

8 of them

R.A.P.D

Randomly Amplified Polymorphic DNA

RFLP

Restriction Fragment Length Polymorphism

PFGE

Pulsed Field Gel Electrophoresis (PFGE)

Bacteria used in the manufacture of fermented foods


3 phylas

Probacteria


Firmicutes


Actinobacteria


Probacteria relevent class

Acetobacter

Firmicutes relevent classes

Lactic Acid Bacteria


BacillusBrevibacterium



Actinobacteria relevent classes

Bifidobacterium


KocuriaStaphylococcus



vinigar bacteria

Acetobacter aceti: the “vinegar bacterium

Undesirable lactic acid bacteria

EnterococcusCarnobacteriumAerococcus, Vagococcus, Weisella



Lactobacillus groups and respiration methods

Group IObligate homofermentativeGroup IIFacultatively heterofermentativeGroup IIIObligate heterofermentative


Natto Culture

Bacillus subtilus

Bifido Bacterium Whats special?

Probiotic


Digests wide variety of carbs (non digentables)


"Bifidum" fermentation pathway


end product Lactic acid Acetic acid

Brevibacterium responcible for

manufacture of surface-ripened cheeses such as Limburger and Muenster

Orange red pigment

Propionibacterium whats special?

Ferment lactose


End products: propionic acid, acetic acid, CO2



Uses lactate as a C and energy source (in the absence of lactose)Produces Vitamin B12Releases proline via peptide hydrolysis


Yeast and molds inportant phyla

Zygomycota, Ascomycota, or deuteromycetes

inportant yeast genera

Saccharomyces, Kluyveromyces, Zygosaccharomyces

Inportant mold Genera

Aspergillus, Penicillium, and Rhizopus

Yeasts charecteristics

UnicellularSexual spores (ascospores)


Non-sporulating (budding)MultilateralPolar

Mold charecteristics

FilamentousSporaniga or conidiospores typeConidia, arthrospore, and sporangiosporePenicillum and Aspergillus: conidiaRhizopus and Mucor: sporangiaSexual spores

Ale yeast

Saccharomyces cerevisiae

lager yeast

Saccharomyces pastorianus

Saccharomyces Distinguishing characteristics:

Morphological properties:Round sphericalOvoidElongated with a pseudohyphaeThe sugar fermentation patterns and the assimilation of carbon sourcesTable 2.6. Distinguishing characteristics of Saccharomyces speciesHyphae formationAscospore formationResistance to cycloheximideGrowth temperaturesOsmophilicHalotolerance

blue cheese mold

Penicillium roqueforti

Brie Mold

Penicillum camemberti

Soy sauce, soy paste sake molds

Aspergillus oryzae, Aspergillus sojae

Tempeh Mold

Rhizopus oligosporus

Definition of fermentation

“energy yielding reactions in which an organic molecule is the electron acceptor….

Electron receptor for lactic acid fermentation

pyruvic acid is the lectron acceptor

Electron receptor for Ethonal fermenation

acetaldehyde is the electron recipient

2 fermentations that dont conform to definition

Malolactic fermantation, fungal fermentation

Homofermentation key enzymes

AldolaseLactate dehydrogenase

Homofermentation ATP production

2 moles ATP / mole sugar and lactic acid

Homofermentation lactic acid bacteria

Lactococcus lactisStreptococcus thermophilusLactobacillus helveticusLactobacillus delbrueckii subsp. bulgaricusPediococcus sp.Tetragenococcus

Heterofermentation key enzyme

phosphoketolase

Homofermentation Results

quimolar amounts of lactate, acetate, ethanol, and CO2 and one mole ATP/hexose

Heterofermenative Lactic acid bacteria

Leuconostoc mesenteroides subsp. cremorisLeuconostoc lactisLeuconostoc mesenteroides subsp. mesenteroidesLeuconostoc kimchiiOenococcus oeniLactobacillus sanfranciscensis