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15 Cards in this Set

  • Front
  • Back

Nucleosome

The fundamental structural repeat unit of chromatin


Chromatosome + ~30 bp DNA linker

Nucleosome core

Histones H2a, H2b, H3, H4


146 bp of DNA

Chromatosome

Nucleosome core + histone H1≈ 166 bp DNA


2 turns

Hypochromic shift

The decrease in absorbance of UV light in a double stranded DNA.


Occurs when bases are stacked.


The wavelength (260nm) doesn't change, only the percent of UV light absorbed decreases.

Hyperchromic shift

The increase in absorbance of UV light that occurs upon denaturation of DNA.


Bases are unstacked and can absorb more light.


Wavelength remains the same, only percent absorbed increases.

Riboswitches

RNA structural elements in noncoding regions of mRNA that, upon binding a specific metabolite, alter expression of the protein encoded by mRNA.


Important in regulation of gene expression in BACTERIA.

Ribozyme

Enzyme made of RNA that can break down an RNA molecule


Enzyme made of RNA that can break down an RNA molecule

Cloning

Isolation and amplification of a segment of DNA.


Creates recombinant DNA.


Target gene isolated, inserted into vector.

Cloning vector

Carrier molecule that can be taken up by bacteria which will express the target gene.

A Type phosphodiesterase

Cleaves 3' phosphate bond.


Produces 5'-phosphate products.



Ex. Snake venom is "a" specific exonuclease

B Type phosphodiesterase

Cleaves 5' phosphate bond.


Produces 3'-phosphate products.



Ex. Spleen phosphodiesterase, "b" specific exonuclease

Exonuclease

Hydrolyze terminal nucleotides

Endonuclease

Hydrolyze middle of chain nucleotides. Some have specificity as to the base at which hydrolysis occurs.

Intercalating agents

Flat hydrophobic molecules composed of fused, heterocyclic rings that slip between stacked base pairs and cause helix unwinding that leads to a more ladderlike structure



Ex. Ethidium bromide, acridine orange, actinomycin D

Zymogen

An inactive proenzyme.


Protein that can't perform it's function until it's activated.