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178 Cards in this Set

  • Front
  • Back
plant cirulatory tissues
xylem, phloem, stomata
sstomata
openings in leaves surrounded by guard cells that can open/close so water can leave (bad!) and carbon dioxide can get to the chloroplasts to make sugars
phloem
(going down)
i. Remain alive
ii. Transport sugar and water from leaves  roots
xylem
(giong up)
Vessel elements and tracheids
1. Cells that die when mature, form a tube
2. Transport water from roots  leaves
3. Thickened cell walls
closed circulatory system
a. Higher pressure in closed faster transport of oxygen
b. Closed: blood remains within a completely closed (unbroken) system of vessels and never comes in direct contact with cells (gets oxygen to cells by diffusion)
open circulatory system
found in Mollusca and Arthropoda. Contains hemocoel (cavity/series of spaces between the organs) and hemolymph
(circulatory fluid inside hemocoel), which transports nutrients to all parts of the body and removes metabolic waste products
Types of photosynthesis
CAM, C4, C3
C3
three reducing reactions. Most plants use C3 photosynthesis—stomata are open during the day. Uses enzyme called “rubisco.” More efficient than C4 and CAM plants under cool and moist conditions and under normal light because requires less “machinery” (fewer enzymes)
C4
Stomata also open during the day. uses the C3 pathway, but there is spatial separation of carbon dioxide movement into plant cells and fixation of carbon dioxide, which reduces water loss when stomata open. More efficient than C3 when CO2 is limited.

- Spatial separation of CO2 movement into plant cells and fixation of CO2
- More efficient than C3 when CO2 limited
Mesophyll:
• CO2 concentrations low
• CO2 captured by PEP and carried to BSC
Bundle Sheath Cell:
• CO2 concentrated
• CO2 enters Calvin Cycle
* Use C4 over C3 when: photosynthesis is limited by CO2
- High light intensities
- High temperature conditions
- Dry environments
CAM
- Temporal separation of CO2 movement into plant cells and fixation of CO2
- Excellent @ conserving water (cactus)
Night:
- Stomata open, CO2 fixed as acid and stored
Day:
- Stomata closed, CO2 released from acid and enters Calvin Cycle
- Most common is deserts
- Overall, not very efficient b/c energy to store CO2 in acid
Alternation of generations: Plant life history
Sporophytes (diploid) and gametophytes (multicellular haploid individual). Spores grow into gametophyte; gametophytes fuse to become sporophyte
Types of photosynthetic pigments
a. Dinoflagellates: chlorophyll c
b. Brown algae: carotenoids, chlorophyll c
c. Diatoms: carotenoids, chlorophyll c
d. Red algae: chlorophyll a, phycobilins
e. Green plants: chlorophyll b
Dinoflagellates: pigment?
chlorophyll c
Brown Algae: pigment?
carotenoids, chlorophyll c
Diatoms: pigment?
carotenoids, chlorophyll c
Red Algae: pigment?
chlorophyll a, phycobilins
Green plants: pigment?
chlorophyll b
Cell-mediated response
an immune response that does not involve antibodies, but does involve natural killer cells. Attack infected host cells. Carried out by T cells. TH¬ cell binds to dendritic cell displaying antigen from pathogen  activated TH cell. Activated TH¬ cell promotes immune response (undergoes multiplication to form clone of effector T cells; stimulates production of B cells; produces T memory cells; activates TC (cytotoxic) cells, which kill infected cells by lysis. This is more generalized than the humoral response.
Humoral immunity
refers to a separate system by which antibodies are made to protect the organism in the future if the antigen returns.
Colorblindness
People may be blind to red-green or yellow-blue (dichromats—lack one cone type) or lack cones so they don’t see color at all (monochromats).
HIV
virus tricks the vertebrate immune system into attacking Helper T cells. In the initial period right after the attack, plenty of antibodies are produced by B cells that rapidly reduce the concentration of HIV but do not eliminate it. Antibody concentration subsequently remains high. However, because there are few Helper T cells, HIV concentration slowly increases as cellular immunity because increasingly compromised.
Plant defense
a. Resin: in vacuoles, when eaten, vacuole bursts and lets out resin which kills insect.
b. Physically deter feeding with spines.
c. Reduce digestibility:
Tannins: Form hydrogen-bonds with proteins. Reduce protein digestibility. Slow development time of herbivore. Increase exposure of herbivore to bad conditions and enemies.
d. Make poisons
Toxins: highly variable in structure and function. Ex. alkaloids, cyanide, mustard gas, THC, etc. Interfere with specific metabolic processes.
Diversity of third line of defense:
millions of T cell and B cell types to cope with diversity of invaders
anther
The plant structure associated with production of the male gametophyte
Endosperm
Tissue that provides nutrition to plant embryo that is analogous to yolk in animal eggs
Bergmann's Rule
Principle that states that the body size of individuals in cold climates tends to be larger than individuals of the same species in warmer climates
Type of photosynthesis that is most common in deserts
CAM
Hemolymph
The “blood” of insects that functions to detect invaders
Helper T cells and Cytotoxic (Killer) T cells are....
The two lymphocyte cell types that are involved in the cell-mediated process in vertebrates
Plasmodesmata
????
Failures of the immune system
Allergic reactions, autoimmune diseases, immunodeficiency diseases
Epitope
The part of the antigen that is recognized by the immune system
Restriction enzyme (endonuclease)
Site-specific nuclease that cleaves foreign unmethylated DNA in the cytoplasm
Homo Erectus
The first species of Homo to migrate out of Africa,
First Homo species to use fire for cooking
Neoteny
Retention of juvenile characteristics in the adult
Steroscopic Vision
Synapomorphy of primates
Modifications to these three groups of bones allowed for bipedal gait
Skull, phalanges, pelvis
Oxygen in this kind of circulatory system gets to cells by diffusion
Closed circulatory system
Blood
A specialized fluid that delivers nutrients to cells and transports waste products from cells
Hemocoel
A cavity or series of spaces in between the organs in Mollusca and Arthropoda
Systolic Blood Pressure
The blood pressure component that refers to the point when ventricles are squeezing
Hemocyanin
An oxygen-carrying molecule that has copper as its central element and is found in spiders
Fovea
Center of the visual field
Vomeronasal organ (VNO)
Information from this organ is sent to a part of the olfactory bulb used for pheromonal communication
Basilar membrane
Membrane in the cochlea that contains hair cells that vibrate with the same frequency as the incoming sound
Ca+2
Ion that binds to regulatory proteins, initiating exocytosis of neurotransmitters
Transduction
The conversion of an electrical signal (action potential) into a chemical signal (neurotransmitter)
Fick's law
Flux= -(permeability of a membrane) (Area) ( concentration gradient)
Lungs-
respiration organ in most tetrapods, a few fish and snails
Hemocoel-
cavity of series of spaces btwn the organs in open circulatory systems
How is hemolymph circulated in an open circulatory system?
- dorsal heart- pulsatile organs
- body movements- normal body motions are usually enough to ciruclate
Hemolymph
circulatory fluid in open circulatory systems
- does not carry oxygen,
- carries nutrients,
- removes metabolic waste
- hydrostatic functions:
- immune response
Hydrostatic Function in open circulatory systems
- use fluid pressure to push out non kitenised hydroskelton
- use water pressure to extend out (dragon flies
Immune response by fat bodies in open circulatory(?)
cells floating in hemocoel fat bodies are the first line of defense)
How do insects breathe?
- tracheal system: tupes com out forom outside body, branch and brach smaller and
smaller until they branch around every cell.
- spiracles- big openings, close and shut- open tubing system�q
Limit of insect size
Breathing: ability to get oxygen to entire body
hemocyanin
copper containing oxygen carrying proteins found in spiders
Closed Circulatory Systems
Blood:
- remains within a completely closed (unbroken) system of vessels
- never comes in direct contact with the cells
how does oxygen get to the cells in closed circulatory system?
diffusion from blood
Advantages to closed circulatory
faster transport of oxygen
- greater efficiency of blood flow
- economy of blood volume
- maintenance of sufficient blood pressure for a large body
2 chambers of heart:
atrium and ventricle (left and right of each, right goes to lungs, left goes to body)
Cardiac Cycle
- 1st part artium are heavily musculated. in part b/c of all the muscles around it. it make
high pressure.
- 2nd part is called low pressure, so heart is in between pushing.
systolic
top number in blood pressure, when the heart muscles contract to pump blood, maximum arterial pressure
diastolic
minimum arterial pressure, during relaxation of heart between beats when ventricles fill with blood
Blood is...
- a specialized fluid
- delivers nutrients, oxygen etc. to cells
- transports waste products from cells
- composed of plasma and severeal kinds of cells
Types of blood cells
- erythrocytes (red blood cells)
- leukocytes (white blood cells)
- thrombocytes (platelets)r
Hemoglobin
iron- containing oxygen-transport protein in the red blood cells of vertebrates
3 organelles in plant cells
chloroplasts, vacuoles, cell walls (cell inside rigid container)
Vacuole Function in plant cells
structural support (hydrostatic pressure), storage, waste disposale)
3 types of plant cells
parenchyma, collenchyma, sclerenchyma
Parenchyma
plant cells where most of the metabolism occurs, thin-walled often with large vacuoles, in leaves these cells have
chloroplasts (stay alive throughout life of cell)
Collenchyma
structural plant cell that dies, flexible (string in celery)
Xylem
vessel that transports water throughout plant,
going up
- vessel elements and tracheids (enlongated cells in the xylem that serve in
transport of water and mineral salts)
- cells that die when mature, form a tube
- transport water from roots to leaves
- thickened cell walls
Phloem
vessel that conducts nutrients through plant, going down
- phloem cells
- remain alive
- transport sugar and water from leaves to roots (bidirectional)
Sclerenchyma
structural cells that die, rigid (wood)
Plant circulation carried out by...
water transport
Stomata
opening in plant leaves, can open and close, allow gas diffusion by transpiration
Transpiration
- water loss by plants through stomata
- use lots of water
- transpiration creates negative tension (sucking in the xylem)
- water molecules adhere to each other--> water pulled UP through the trees

Functional significance of transpiration
- replenishes water lost to evaporation
- enables access to soil nutrients
- cooling of plant tissuee body
Osmotic potential
pulls water from soil through root hairs to xylem
Cavitation and xylem wall thickness
- hard wall because when you don't have enough water, the tubing system doesn't
collapse
- amount of transpiration then you get loss of hydrostatic pressure, so schlorincema
cells.
- cavitation- the collapse of the cells because of lack of hydrostatic pressure
- transpiration exceeds water supply to roots
- only xylem vessel affected
- xylem vessels remain intact b/c of rigid walls
- xylem has to be hard, so the system can work again after water loss
Tree height limited by...
water availability to top
Photo-autotroph
organism that generates organic compounds using CO2 and light
Chloroplasts developed...
endosymbiotic theory, developed from cyanobacteria (blue-green algae)�i
Why care about plants?
- food
- carbon fixation
- oxygen productions
- temperature modification
- humidity
- soil modification
- major source of biodiversitylarge body
Photosynthesis (cyanobacteria, protists, higher plants)
- phosphorylation- �light� reactions
- calvin- benson cycle- �dark� reactionss
C3 Photosynthesis
vast majority of plants use this type
epidermis
outermost layer of cells of a leaf, water impermeable, have pores that open and close, veins that move sugars.

Adaptations:
- stomata position (top & bottom, or just on the bottom-reduce amount of water loss)
- leaf size (shade leaf vs. sun leaf)
- leaf orientation (flat vs. angled)
- avoidance (when the plant is out, usually only out during a couple months of the year)
- stomata closure - when you stop water form going out, you stop CO2 from coming in
Photosynthetic pigments
primary: chlorophylls
secondary: carotenoids and phycobilins
Plants and green algae have... ("chlorophyta")
chlorophyll a and b
These use chlorophyll c
Dinoflagellates (brown algae), Diatoms, Rhotophyta-red algae
alteration of generations
????
Animal life cycle
gametes join to form zygote > cleavage (mitotic division of cells) forms blastula > gastrulation forms adult tissue

zygote>embryo>fetus>adult>produces gametes
Plant Adaptations to life on land
- waxy cuticle
- surface pores (stomata) that enable gas exchange
- retention of the embryo within the adult
- greater parental investment (heteropsory)
- protected repoructive structure (seed)
- pollen
Integument
seed coat
Parts of a flower
1. sepals
a. protect the bud until it opens
2. petals
a. attract insects (just advertisement)
3. stamens
a. make pollen
b. anther(male)pollen grains grow into the anther
i. when grants are fully grown the anther splits open
c. pistil (female)
i. stigma, style, carpel (ovary), ovules (eggs)
4. carpel(ovary)
a. grow into fruits which contain the seeds
sepal
flower part that protects the bud till it opens
petals
flower part that attracts insects
stamens
(male) make pollen at tip called anther (JUST THE TIP)
carpel
(female) grow into fruits which contain the seeds (ovary)
Pistil: stigma, style, carpel, ovules (egg)
Pollination and fertilization
Pollen transferred from stamen to stigma(top of pistil), Pollen usually contains two nuclei at the time of dispersal. One of these nuclei divides to form two male gametes by the time the pollen tube reaches the ovary. The pollen tubes carry the male gametes to the egg cells in the ovules where fertilization occurs. At egg, tube bursts and releases two sperm cells
One unites with egg cell
One unites with central cell to produce the endosperm
Parts of the seed
seed coat, endosperm, embryo
Adaptations for seed dispersal
pollen, fruit (animals eat), seeds, ability of seeds and pollen to stay dormant for a long time
Aneomophilous
wind loving pollen. high production, far dispersal, lightweight, less efficient
zoophilous
animal loving pollen. low production, poor dispersal, larger, sticky
ballistic dispersal
shooting seeds
strategies to avoid self pollination
1) Timing: Male and female structures mature at different times
2) Morphological: structure of male and female organs prevents self-pollination (imperfect flower)
3) Biochemical: chemical on surface of pollen and stigma/style that prevent pollen tube germination on the same flower (incompatible)… if too related, female just doesn’t feed pollen tube.
Homeostasis
enables an organism to live in many habitats (includes blood sugar, blood pH, blood pressure, body temperature)

How maintained?
Regulation- regulate own temp
Conformation - operate at temp of environment
Stages to maintaining homeostasis
detection > counteraction

Receptor - receives stimuli (detection)
Integrator - processes the information from the stimuli (regulatory center)
Effector - carries out a response to stimuli (counteraction)
Mammaliam thermal regulation (2 types)
cold: vasocontraction, shivering
hot: vasodilation, sweating
vasocontraction
constricting of blood vessels so blood flow is limited to minimize heat loss
vasodilation
widening of blood vessels to reduce TPR
Examples of Positive feedback loops
Blood clotting
Lactation
Contractions
Suffocation
Quorum sensing in bacteria (causes more inducer to be produced as population grows - glowing!)
Examples of negative feedback loops
shivering
sweating
Heat transfer (4 types)
- radiation: heat transfer between objects not in direct contact
- evaporation: removal of heat from the surface as water evaporates (always heat loss)
- convection: transfer of heat by the movement of air or liquid past a surface (wind)
- conduction: direct transfer of heat between molecules of objects in direct contact
Poikilothermic
cold blooded
Thermoregulation (two types)
behavioral or physiological (feedback loops)
torpor
period of dormancy to save energy where an organisms temperature drops. can be daily or long-term/hibernation
endospore (2 meanings)
- bacteria: inactive form of bacteria during envrionmental extremes

- plants: innermost wall of a spore or pollen grain
spore
a small usually single-celled asexual reproductive body produced by many nonflowering plants and fungi and some bacteria and protozoans and that are capable of developing into a new individual without sexual fusion
Methods of behavioral Thermoregulation
- migration:animals moving great distances to avoid cold, and find more food
- backing: adjust posture, animals bask to increase body temperature by exposing more
surface area to the sun
Methods of physiological thermoregulation
- countercurrent exchange: minimize heat loss by running vein and arteries right next to
each other
-shivering, sweating, panting, vasocontraction, vasodilation
homeothermic
warm blooded
ectothermic
do not generate heat internally
endothermic
do generate heat internally
Temperature responses over 3 time scales:
acute, minutes
chronic, hours/days
evolutionary, geological time
eurythermal
can function over wide range of temps (eg. goldfish)ts)
stenothermal
only survive in anarrow tem range (eg arctic fish)h)ts)
freeze avoidant
migration, hibernation, staying warm
freeze tolerant
extracellular freezing, up to 70% body water frozen
Plant defenses
physical spines
toxins
Chemical defense
Tannins (general chemical defense)- many variants
§ Form hydrogen bonds with proteins
§ Reduce protein digestibility
§ Slows development time of herbivore
§ Increase exposure of herbivores to adverse conditions and enemies
§ Attach to proteins + reduce how fast can digest proteins à little nutrient absorbed by thing eating it
§ Cyanide, mustard gas, and other specific chemical defenses – interfere with metabolic processes
Induced plant defenses
Apoptosis- programmed cell death
Brown spots- A hypersensitive response against a virulent pathogen- Seals off the infection and kills both pathogen and host cells - When being attacked send out salicylic acid signal to up their defense
Recruiting parasitoids- wasps help w/ things eating leaves also below ground (nematodes)
Bacteria and Phages
Immune Response
Bacteria & phages
Endonucleases, etc. and self recognitionBacterial nucleasesPeriplasmic nucleases- non-specific, clip DNA of virus, degrade foreign nucleic acids in the periplasmRestriction enzymes- site specific; cleave unmethylated DNA in cytoplasmNuclease- type toxins: degrade nucleic acid in foreign cells, eliminating competitorSelf recognition: DNA methylation of own DNA, protection from endonucleases
Gene-for-gene interactions and virulence-
Pathogen is avirulent if: pathogen has specific Aur gene and pathogen has specific R allele- Matching à binding of Aur ligand and R receptor- Virulent: plant becomes diseased if no match between pathogen Aur gene and plant R allele
Innate immunity
Coded by a gene
Aquired immunity
Recognize antigens from immunological memory
Phagocytosis
injest whole cell
Encapsulation
surround and kill invadors
Humoral Response
only activated when attacked
Cells secrete antimicrobial peptides
Melanization: enzymatic cascadeAntimicrobial peptides
Hemolymph (blood): detection of invadors
Turns on genes not active previous to attack
Cytoplasm: signal transduction
Nucleus: activate genes for antimicrobial peptides
Oxidative species....
Cellular response
innate, just floating around Phagocytosis: Injest whole cell Encapsulation: Surround and kill invadors
First Line of defense
External: skin, mucous, secretion, hairs
goal: prevent access
Second line of defense
Internal: phagocytic, antimicrobial, inflammatory, natural killer
goal: recognize and destroy
Third line of defense
Humoral or cell-mediated
Specific defense mechanisms:
1. Specificity each Tcell and antibody (produced by B cells) recognizes a specific antigenic determinant
2. Diversity millions of Tcell and Bcell types, to cope with diversity of invaders
3. Immunological memory cellular remembrance of past infections poised for next infection
4. Non-self from self recognition: don’t attack yourself (autoimmune disease)
Cell-mediated immunity
????or cell mediated
Humoral immunity
????
Endocytosis
cell's plasma membrane fold in to engulf something
antigen
a substance that triggers an immune response in the body
antibody
protein produced by b-cell/lymphocyte that binds to antigens and neutralizes them. marks them for destruction by macrophages.
epitope
site on surface of an antigen where antibodies attach to
lymphocyte
Any of various white blood cells, including B cells and T cells, that function in the body's immune system by recognizing and deactivating specific foreign substances called antigens. B cells act by stimulating the production of antibodies. T cells contain receptors on their cell surfaces that are capable of recognizing and binding to specific antigens. Lymphocytes are found in the lymph nodes and spleen and circulate continuously in the blood and lymph.
B cell
lymphocyte involved in humoral response. Upon recognizing an antigenic determinant, a B cell develops into a plasma cell which secretes an antibodydies) that inactivate the antigens
Helper T cell
recognizes antigens and participates in the activation of B cells and other T cells; targets of the HIV-I virus;
Cytotoxic T cell
A large differentiated T cell that functions in cell-mediated immunity by attacking and lysing target cells that have specific surface antigens
Dendritic Cells
roams body looking for invadors, A highly specialized white blood cell found in the skin, mucosa, and lymphoid tissues that initiates a primary immune response by activating lymphocytes and secreting cytokines.
memory cells
long-lived lymphocyte produced by exposure to antigen. Able to mount a rapid response to subsequent exposures to specific antigen
clonal selection
exposure to antigen result in the activation of selected T or B-cell clones resulting in an immune response
Primary immune response
1st response of immune system to antigen, involving recognition by lymphocytes and the production of effector cells and memory cells
Secondary immune response
rapid/intense response to a subsequent exposure to antigen, initiated by memory cells
How does AIDS induce an autoimmune response?
????
Eye parts
- White are: sclera (for human communication)- Pupil: small opening through which light enters- Iris: contracts, controls amount of light in cornea- Lens: focuses light onto retina- Retina: lining of eye containing receptor cells that are sensitive to light- Fovea: center (sharp central vision), contains only cones
Eye layers
-Photoreceptor
-Bipolar cell layers
- Ganglion Cell
Ganglion Cell
- light must travel through layers of neurons + blood vessels before it gets to rods + cones
- preprocessing of info prior to signals leaving eye
Photoreceptors
Rods + cones- Contain photosensitive pigment- All rods single pigment, cones 3 pigment areas (blue, green, red)

Increased sensitivity in dark and visa versa
Blind Spot
where optic nerve leaves eye
Photopigment:
- Not evenly distributed- Mainly reds(64%), very few blues (4%)- Insensitive to short wavelengths,- High sensitivity to long wavelengths- Center of retina has no blue
Ocelli
insect: simple eye doesn’t form image, detects horizon, changes in light intensity
Stemmata
insect: simple eye used for vision of larvae
Compound eye
-Two per insect
-Ommatidia are facets that make up eye: connected to nervous system
- Perception of form: Mosaic theory (many small eyes)
- Insects (UV) short wavelengths
Sensilla
insect hearing: (hair)- mechano receptor that respond during deformation w/ a charge from nerve cell to brain
Chemoreception
insect taste: - open tip dendrite, bottom of feet + mouth, ovipositor + antennae
olfaction
sense of smell for insects and vertabrates (vomeronasal organ, glomuleri)
hearing
vertabrates:
inner, middle, outer ear
Bones: cochlea, basilar membrane, hair cell
balance
associated with cochlea
rods
very sensitive to light, provide night vision
cones
sensitive to color and light, found in fovea, work best in light
cochlea
part of the inner ear containing fluid that vibrates, causes vibration of
basilar membranets)r
basilar membrane
membrane in the cochlea which contains receptor cells,
called hair cells
cell mediated immunity
Cell mediated immunity is the type of response that can allow cells of our immune system (T cells) to recognize which cells in our bodies are virally infected. The T cells seek out these cells, and destroy them, thereby killing the virus contained within them.
humoral immunity
This refers to a response by certain cells of the immune system (B cells) which have the ability to make what are called antibodies. Antibodies are proteins which float around in the blood and have a particular ability to bind to a foreign protein. Depending on the features of this foreign protein, antibody binding to it will have numerous possible effects.