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23 Cards in this Set

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What is metabolism?
The overall process through which living systems acquire and utilize the free energy they need to carry out their various functions but coupling exergonic reactions of nutrient oxidation to the endergonic processes required to maintain the living state.
Catabolism
involved in degradation;
complex metabolites are exergonically broken down to simpler products
chemical oxidation and formation of reduced cofactors of NADH, NADPH, and FADH2
Convergence of Pathways
Anabolism
involved in biosynthesis
reduction and formation of oxidized cofactors NAD+, NADP+, and FAD
Requirement for energy input and use of ATP
Divergence of pathways
What are autotrophs?
They can synthesize all their cellular constituents from simple molecules such as H20, CO2, NH3, and H2S.
Need an energy source--usually solar energy
What are heterotrophs?
obtain energy through the oxidation of organic compounds (products of autotrophs); and hence are ultimately dependent on autotrophs from these substances
What are aerobes and anaerobes?
Two types of heterotrophs
Aerobes live in air and use molecular oxygen for metabolic reactions whereas anaerobes do no require oxygen for surviaval
Metabolic Processes in Heterotrophic Cells
Route A: Organic compounds from environment are absorbed into organism such as fats, carbohydrates, and amino acids
Route B: Special organic compounds that cannot be biosynthesized such as vitamins, essential amino acids, and fatty acids
Stages of Metabolism
Stage I: Cleavage of Polymeric Chain to monomeric units
Stage II: Formation of monomeric units into a common intermediate
Stage III: common intermediate enters into pathway that produces the most amount of energy
Common intermediate: Acetyl-CoA
used in degradative metabolism to produce CO2 and H2O by citric acid cycle, electron-transport chain, and oxidative phosphorylation
What are metabolic pathways?
series of consecutive enzymatic reactions that produce specific products--the reactants, intermediates, and products are referred to as metabolites.
Glycolysis pathway
Linear
one substrate--->product
Biosynthesis of amino acids
Linear
Citric acid cycle
subsrate reproduced, and product leaves each turn
Fatty Acid degradation pathway
lengthen/shortening of biomolecules
Metabolic Pathways are irreversible
If two metabolites are metabolically interconvertible, the pathway from the first to the second must be different from the pathway from the second to back to the first
Principle characteristic of metabolic pathway (#1)
Every metabolic pathway has a first committed step
there is generally an irreversible (exergonic) reaction that commits the intermediate it produces to continue down the pathway
All metabolic pathways are regulated
pathways are controlled by regulating the enzymes that catalyze their first committed step. This is the most efficient way to exert control because it prevents the unnecessary synthesis of metabolites further along the pathway when they are not required
-controlled by the concentrations of substrate, products, intermediates, and enzymes
Pathways in eukaryotic cells occur in specific cellular locations
the synthesis of metabolites in specific membrane bounded subcellular compartments makes their transport between these compartments a vital component of eukaryotic metabolism
Oxidation-Reduction
Enzyme: Oxidoreductases (dehyrogenases)

transfer of electrons
Group Transfer
Enzyme: Transferases

Transfer of functional group from one molecule to another or within a single molecule
Hydrolytic Cleavage (Hydrolysis)
Enzyme: Hydrolyases

cleavage of bonds by water (transfer of functional group to water)
Nonhydrolytic Cleavage
Enzyme: Lyases

Splitting a molecule by nonhydrolytic processes
Isomerization and rearrangement
Enzyme: Isomerases

Rearrangement of functional groups to form isomers
Bond Formation using energy from ATP
Enzyme: Ligase

Formation of C-C and other bonds with energy from ATP