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13 Cards in this Set

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Non-polar groups
Non-polar groups (7)
Gly-G ---- Ala-A ----- Pro-P ------ Val-V -----Leu-L------- Ile-I----- Met-M
Aromatic R
Aromatic R (3) -- tYYYr
Phe-F------ Tyr-Y-------Trp-W
Polar uncharged
Polar uncharged (5) --- asparagiNNNe
Ser-S------Thr-T-------Cys-C------Asn-N------Gln-Q (most abund)
Negative charged -1
Negative charged -1 (2) --- aspartATE ---- MSG (5C)
Asp-D-----Glu-E (neurotransmitter)
Positive charged +1
Positive charged +1 (3) -- aRRRg
Lys-K------Arg-R------His-H
OH ------------SH --------H2N-C=O----------COO-----------NH3-NH4 --- noncharged----- Arom
ST---CM----NQ-----ED-------KRH---- GAPVLIM------FYW
His positive when
His positive when
when pH<6.0 in pronated form --> low pH lots of H add H in
Sickle cell --- less water soluble --- brittle  ---- treatment
Sickle cell --- less water soluble --- brittle ---- treatment
Glu --> Val on #6 (neg - vs nonpolar) ---> noncharged less polar water is polar ----- crystalize ----- give more O2
pH=pKa + log (B/A)
pH=pKa + log (B/A) -- protonation state (acid state) --> base/Acid
--> pH determine the drug in its acid form or basic form
What is the pH at which we have 10 times more of the acid form than the basic form for the drug “aspirin”? pKa=3.5
pH=pKa + log (B/A) ---- pH = 3.5 + log (1/10) --> pH = 3.5 - 1 = 2.5 --- more acid in stomach ---- need enteric coating
pI and buffer capacity
pI and buffer capacity
at pI: drug has no charges ---- buffer in 1 pH unit of its pKa
His pI --> use the point of 0 charged
His pI --> use the point of 0 charged
pI=(6.0+9.17)/2=7.59 (when it has both + and -)
Protein cross-link Cys (curly hair)
A disulfide bridge