Bacterial Infection: A Personal Statement

Improved Essays
My desire is to become an experimental physical chemist who studies biological systems. I hope to combine my interest in physical chemistry, and the knowledge I have gained working in a chemical biology research laboratory, to understand biological macromolecules at a fundamental level.
When I first attended organic chemistry seminars as a sophomore, I was impressed at the eloquence and the enthusiasm of the speakers. Endeavoring to have insights like those of experienced scientists, I took advantage of the college honors program to initiate a challenging honors paper for my organic chemistry class. In this paper, I discussed the research of six different research groups all seeking unique chemical ways to battle bacterial infections. The
…show more content…
studies in chemistry. I have performed undergraduate research with Professor Scott Silverman at the University of Illinois at Urbana-Champaign, working on identifying DNA catalysts capable of cleaving peptide bonds. Single-stranded DNA is rich in secondary and tertiary structures, and specific sequences have been identified to catalyze various chemical reactions. DNA catalysts are identified through a strategy called in vitro selection, a process by which catalytically active sequences are selected from a pool of random sequences. My first project was to evaluate the effect of the electrophilicity and nucleophilicity in the DNA-catalyzed amide bond cleavage reaction. I worked closely with my graduate mentor and advisor in the design of the selection experiments. Also, I prepared nucleopeptide and oligonucleotide substrates, and performed the selection experiments. New DNA catalysts were not found, suggesting that 40-nucleotide-long DNA sequences do not have the capability to catalyze amide cleavage even with stronger nucleophiles and more electrophilic amide …show more content…
I found it remarkable how so many variables in the selection for new DNA catalysts are not fully understood, yet deoxyribozymes are identified through well-developed experiments. My two years of research identifying and characterizing DNA catalysts, combined with my excitement in physical chemistry, has motivated me to study biological systems with physical tools. MIT's highly advanced facilities and strong physical chemistry research labs that integrate various disciplines make it an ideal institution for me to pursue graduate study. Particularly, I am intrigued by the research groups that utilize and develop spectroscopic methods to study biomolecules. Prof. Gabriela Schlau-Cohen has caught my attention, with her research on using single-molecule and ultrafast spectroscopies to study photosynthetic and membrane proteins. Prof. Mei Hong's studies of influenza M2 proteins and plant cell walls using solid-state NMR spectroscopy align with my interest in determining the detailed structures, mechanisms and physical principles of biomolecules. My other desire is to develop tools that enable biological studies in novel approaches. I would like to further learn about Prof. Alexander Shalek's work on developing nanotechnology-based methods to study collective behavior of

Related Documents

  • Decent Essays

    Unit 4 Dna Research Paper

    • 172 Words
    • 1 Pages

    Nucleotide: a nucleic acid monomer, consisting of five carbon sugar covalently bonded to nitrogenous base and phosphate group. DNA “backbone” : chain nucleotide made of sugar and phosphate group that are joined together by covalent bond and are resistant to cleavage Antiparallel: the 2 strands of DNA double helix that run in opposite directions of each other Reactive chemical group at the 5’ end of DNA: phosphate group Reactive chemical group at the 3’ end of DNA : hydroxyl group The four DNA nucleobases thymine (T), adenine (A), Cytosine (C) and guanine (G) , Complementary base pairing adenine and thymine pair (A-T) and guanine and cytosine pair (G-C) Melting temperature: temperature needed to break 50% of the hydrogen bonds Chromatin:…

    • 172 Words
    • 1 Pages
    Decent Essays
  • Decent Essays

    Several Advancements in technology produced a fast DNA sequencer in the 70’s, and in 1983, Karv Mullis created what is called Polymerase Chain Reaction (PCR). PCR is a very simple and inexpensive technology that is used to amplify and produce large amounts of copies of a segment of DNA. Now this has become one of the most significant scientific advances in molecular biology, PCR amplification is used every day to diagnose diseases, its also used to identify bacteria and viruses, and to match criminals to crime scenes. PCR has revolutionized the study of DNA to such an extent that Dr. Mullis was awarded the Nobel Prize in Chemistry in 1993.…

    • 110 Words
    • 1 Pages
    Decent Essays
  • Decent Essays

    In most cases, a chemical reaction is able to occur in more than one way; enzyme kinetics studies the effect of how biological catalysts can influence biochemical reactions. Enzymes play an important role in regulating metabolic pathways in the human body and without enzymes they will not function efficiently. The rate of a reaction is enhanced by enzyme activity which provides alternate pathways for the reaction to proceed by.…

    • 177 Words
    • 1 Pages
    Decent Essays
  • Improved Essays

    Wolf In Sheweed Summary

    • 539 Words
    • 3 Pages

    On October 31, 2017, at 4:00 pm, I attended the Department of Biology Seminar Series hosted by Dr. Richard Gomer that helped in the Biological Sciences Building East, Room 115. The lecturer was Dr. Carolyn Cannon from the Department of Microbial Pathogenesis and Immunology at the College of Medicine TAMHSC. What intrigued me to go to this lecture was the title, “Wolves in Sheep's Clothing: Killing Bacterial Pathogens with Innocuous Compounds. Surprisingly the title did match the content that Dr. Cannon was conveying to her audience.…

    • 539 Words
    • 3 Pages
    Improved Essays
  • Improved Essays

    The folding mechanism of knotted/slipknotted protein has become a challenging question over the last two decades.(10, 89, 90, 95, 99, 100, 173-175) Understanding how those proteins fold would be a great proceeding of the field of protein folding. Recent advances on protein folding shed light on this question using both experimental and computational methods. .(10, 89, 90, 95, 99, 100, 173-175) Most experimental studies on the folding of knotted protein have been limited to bulk experiments.(84, 87, 90, 91, 93-95, 98, 102) Single molecule fluorescence resonance energy transfer has been used to study the location, size and movement of the knot in denatured protein.(176) Experimental study of the folding of knotted protein remains a mystery at…

    • 1809 Words
    • 8 Pages
    Improved Essays
  • Improved Essays

    “Thank you.” This was the simple yet meaningful response a patient’s husband gave to the emergency physician as I observed from the corner of the room. It was determined through a plethora of laboratory studies and clinical intuition that the patient was suffering from hepatorenal syndrome, secondary to her battle with metastatic colorectal cancer that spread to her liver. Her husband knew the prognosis, but this time she would be unable to recover. Despite the manic pace of the emergency department, Dr. Gregg took time to carefully explain the patient’s situation.…

    • 820 Words
    • 4 Pages
    Improved Essays
  • Improved Essays

    My current research agenda is on the guidelines of my coursework. The most interesting, is an independent research project over the purification and partial characterization of an enzyme. The goal of this project is to devise a purification protocol to purify our enzyme from crude starting materials to a state where it is relatively pure. We will take it as far as we can within the constraints of time and available equipment. During this process we will become familiar with the various techniques available to purify enzymes.…

    • 238 Words
    • 1 Pages
    Improved Essays
  • Improved Essays

    (2009) prepared DNA probes S.55 from nucleosides S.16 incorporating thermolytic protetcing groups, N-arylcarbamoyl and N-(phenylsulphonyl)carbamoyl (psc), onto the amino groups of deoxycytidine, deoxyadenosine, and deoxyguanosine by reacting with corresponding isocynates (Figure X.X.X). Deprotection was carried out by heating under neutral conditions, enabling a new system of molecular switching by simply heating and reprotection with isocynates. Figure X.X.X shows deprotection mechanism under thermal conditions. A combination of thermolytic phosphate and amino protecting groups may lead to oligonucleotides that can be depeotected without any basic…

    • 1764 Words
    • 8 Pages
    Improved Essays
  • Superior Essays

    Proteins are large, complex molecules found throughout the body. They are polymers made out of different types of small unites called amino acids. Each amino acid consists of a central carbon atom, which is attached to a hydrogen atom, an amino group, a carboxyl group, and a unique side chain or R group. There are twenty different types of amino acids and each one of them has different chemical properties. Amino acids are held together by covalent peptide bonds therefore the proteins, chains of amino acids, are also called polypeptides.…

    • 1517 Words
    • 7 Pages
    Superior Essays
  • Improved Essays

    Because of the chemical inertness of MWCNTs, it is essential to create reactive groups on the surface for further modification [15]. The carboylic groups on the MWCNTs provide ideal anchoring point for the covalent immobilization of enzyme using EDC/NHS [15]. It has been demonstrated that sonicating MWCNTs in a mixture of acid solution opens the tube caps and forms carboxylic groups at the defect sites along the side walls [36]. Fig. 1 shows the FTIR spectra of MWCNTs and acid-treated MWCNTs.…

    • 1600 Words
    • 6 Pages
    Improved Essays
  • Improved Essays

    Rachel Guest January 25, 2018 CHM 3050-01: Chemistry Seminar The Mystifying Case of Bengü Sezen In 2000, Bengü Sezen started her doctoral studies at Columbia University. “For her doctoral work at Columbia, Sezen claimed to have developed a method for selectively activating C-H bonds, a technique commonly used to functionalize hydrocarbons” (Schulz, 2011).…

    • 795 Words
    • 4 Pages
    Improved Essays
  • Improved Essays

    Deoxyribonucleic acid consists of a phosphate and deoxyribose backbone, and four different nitrogenous bases. These bases are adenine, guanine, cytosine, and thymine. Ribonucleic acid, the molecule formed in the transcription of DNA, is made up of phosphate, ribose, and adenine, guanine, cytosine, and uracil. The backbone of DNA consists of a phosphate bonded to a deoxyribose molecule.…

    • 651 Words
    • 3 Pages
    Improved Essays
  • Improved Essays

    Triclosan Research Paper

    • 1124 Words
    • 5 Pages

    More is Not Better The New York Times reported on September 2, 2016 that the Food and Drug Administration (FDA) has declared a ban on the sale of soaps containing 19 chemicals designed to make the soaps antibacterial (Travernise, 2016, para. 1). This ban will affect approximately 40 percent of liquid and bar soaps currently on the market (Tavernise, 2016, para. 2). In 2013, the FDA had allowed the industry two years to prove the safety and efficacy of the added ingredients before making a decision as to the future of the chemicals (Travernise, 2016, para. 7). The manufacturers, however, have failed to produce enough evidence to prove to the FDA that the chemicals make a significant contribution to soaps efficiency or squash mounting safety…

    • 1124 Words
    • 5 Pages
    Improved Essays
  • Improved Essays

    Microorganism Infection

    • 842 Words
    • 4 Pages

    The history of microorganism infection predates written accounts. Evidence of ancient prophylactic measures such as applying mold and soil to wounds attests to the age–old challenge of combatting illnesses caused by microbes. The modern era of medicine began with advents in the treatment of widespread ailments, most notably the discovery of penicillin by Sir Alexander Fleming in 1928 (“History of Antibiotics,” 2010). With the first effective compound against bacterial proliferation, infections such as syphilis and tuberculosis proved no match for the powerful drug. Yet, over decades of medical advances, the development of antimicrobial drugs has become all but stagnant, stymied by a lack of discovery of new compounds that might offer medicinal…

    • 842 Words
    • 4 Pages
    Improved Essays
  • Superior Essays

    Our world and everything it contains is held together by one thing: chemistry. Chemistry plays an important role in all of our lives due to this fact. Whether in my career or in everyday events, chemistry will be an unseen, yet central, influence in my life. This is apparent in both my personal activities when baking, wearing clothing, participation in holiday traditions and my professional life when writing software, creating biological implants, engaging in computational chemistry and in the creation of the hardware I will use.…

    • 1414 Words
    • 6 Pages
    Superior Essays