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25 Cards in this Set

  • Front
  • Back
What is a genome?

Eukaryote
The haploid set of chromosomes that contain genetic material in a cell of a multicellular organism
DNA is made up of what?
Nucleic Acids
What are the principle 4 nucleotides that convey information?
Cytosine
Thymidine
Adenine
Guanine
A series of three nucleotides in sequence make up what?
A codon
What makes up a base pair?
A-T
G-G
How many base pairs are in the human genome?
over 3 billion
What is the Transcriptome
The sum total of all the messenger RNA molecules expressed friom the genes of an organism
Why do we have some many different cell types of all cells have the same DNA?
The Transcriptome is a reflection of the expression of genes. While all cells have the necessary blue print to be identical, not all are.
What use is there for understanding the transcriptome?
Biology
Disease pathogenesis
Cancer
Response to therapy
Define proteome
The entire complement of proteins that is or can be expressed by a cell, tissue or organism
Use real life examples to define the terms Genome, Transcriptome and Proteome?
The Genome is the Blueprint
The Transcriptome is the
The Proteome is the finished product (in this case a house/building)
Give some examples of protein uses?
Enzymes
Antibodies
Growth factors
Muscle
Breathing

Blah blah blah
What exactly are proteins?
Strings of amino acids that make up peptide sequences based on a code given from DNA in the form of mRNA
How many amino acid codes can three base pairs make up?
64

20 in reality
There are 61 codons in fact but only 20 amino-acids, what does this mean about the genetic code?
And why is this so?
Degeneracy

Protection against mutations
Which aa does Transcription always start with?

and what does it stop with?
Methionine AUG

UAG/UAA
Describe aa structure
NH2--C(R, H)--C(OH=O)
Name some post-translational modifications made to proteins that can alter their function
Glycosylation
Phosphorylation
Prenylation
Hydroxylation
Sulfation
Methylation
Proteolysis
WHat components are needed to assemble proteins?
mRNA
rRNA
tRNA
Which ribosomes do we have in our cells?
40s and 60s which make up 80s

Sedimentation rate
What are the steps in translation?
1 )mRNA produced
2) Pre-initiation complex Met:tRNA+40s
3) Met:tRNA+40s+60s
How do proteins know where to go?
They are tagged by the ER/Golgi by signal peptide

NLS etc.
Talk about the different structures in protein manafacturiong
primary = amino acid sequence
secondary = alpha-helices and beta-sheets
tertiary = proper folding into its final shape
quaternary = multiple subuints that form one overall functional protein
Proteins give clues to disease mechanisms and etiology
It's true
A knowledge of rational drug design is dependent on protein structure.

Give examples
Monoclonals
Peptide mimetics
Recombinant proteins (insulin)
Blockers