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32 Cards in this Set

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________: DNA replicates in the cells, never leaving the nucleus. When complete, a new double stranded molecule identical to the original is formed.

DNA replication

What is the role of the proteins involved in DNA replication?

One protein unwinds the double helix, one holds the strands apart, and others perform different distinct functions.

_________: Crucial enzyme that travels along the single DNA strand, adding the correct nucleotides to the free end of the new strand. Also performs proofreading and checks for mutations.

DNA polymerase

________: Mutation where one base pair is replaced by another; also called missense mutation.

Base pair substitution

_______: Insertion or deletion of one or more base pairs to the DNA molecule.

Frame shift mutation

Where does protein synthesis take place?

Cytoplasm

________: Process by which RNA is synthesized from a DNA template.

Transcription

What is the function of RNA polymerase during transcription?

RNA polymerase binds to a promoter site on the DNA. Then pulls a portion of the DNA strands apart from one another, allowing unattached DNA bases to be exposed. This one DNA strand provides the template for the sequence of mRNA nucleotides.

Transcription continues until a ______ _____ is reached.

Termination sequence

After the termination sequence is reached, what happens?

The RNA polymerases detaches from DNA, and the transcribed RNA is freed to move out of the nucleus and into the cytoplasm

________: Process by which RNA directs the synthesis of a polypeptide.

Translation

Anticodon

dksaf

Describe the process of translation.

-tRNA has site for attachment of an amino acide (opposite side of tRNA is three nucleotides called the anticodon)


-tRNA brings specific amino acids (encoded by each mRNA codon) into place at the ribosome site.


-As the amino acids are brought into the proper sequence, they are joined together by peptide bonds to form long strands called polypeptides


-Translation creates chain of amino acids in specific order that creates a unique protein

T/F: Several polypeptide chains may be needed to make a complete protein molecule.

TRUE

_______: Creates chain of amino acids in a specific order that creates a unique protein.

Translation

Why are transcription and translation important?

Because of cell function!


-Most cells produce effects on body through use of proteins.


-Each cell has a particular set of genes that is turned on so that it produces its specific proteins.


"Each cell has a particular set of genes that is turned on so that it produces its specific proteins".



Explain how beta cells in the pancreas illustrate the above statement.

Beta cells in the pancreas produce insulin- No other cells in the body do that; they have that particular genetic code turned on. As the cells replicate, they reproduce that exact pattern of DNA, which is then transcribed to mRNA, which is translated to a protein, which then produces the hormone.

What are the four phases of protein conformation?

Primary


Secondary


Tertiary


Quaternary

Describe the primary protein conformation.

-Simply an amino acid chain.


-Sequence of a chain of amino acids


-"Stringing together of amino acids"

Describe the secondary protein conformation.

-Amino acid chain folded into a pleated sheet or helix (DNA!)


-Hydrogen bonding of the peptide backbone causes the amino acids to fold into a repeating pattern.

Describe the tertiary protein conformation.

-Pleated sheet or helix folded into hydrophillic or hydrophobic molecule


-Three-dimensional folding pattern of a protein due to side chain interactions


-Folded in (exposes positive charge) vs. folded out (exposes negative charge)

Describe the quaternary protein conformation.

-Two or more tertiary structures combine to form a functional protein


-Protein consisting of more than one amino acid chain


-Two or more of the amino acid chains have been folded and oriented, then stick together.


-Hemoglobin is an example

Proteins are made from what?

A chain of amino acids (polypeptides)

There are _____ types of amino acids in proteins.

20 types

T/F: Each type of protein has a unique sequence of amino acids.

TRUE

T/F: Proteins are major workhorses of the cell.

TRUE

Proteins facilitate transport across membranes by serving as ______, ______, and _____.

Receptors


Enzymes


Transporters


Describe the functional and structural roles proteins play in cell, organ, and organ system function.

1. Recognition and binding units (receptors) for substances moving in and out of the cell.


2. Pores or transport channels for various electrically charged particles (ions/electrolytes) and specific carriers for amino acids.


3. Specific enzymes that drive active pumps and promote concentration of ions (K+) within the cell, while keeping concentration of other ions (Na+) below concentrations in extracellular environment.


4. Cell surface markers (ex: glycoproteins) that identify a cell to its neighbor.


5. Cell adhesion molecues (CAMs)- Allow cells to hook together and form attachments to the cytoskeleton to maintain cellular shape.


6. Catalysts of chemical reactions


7. Energy transduction: Membrane proteins are key components in converting chemical energy into electrical energy.



***OVERALL: Proteins govern communication between cells through enzymatic, transport, and recognition-receptor functions in cell physiology.

Describe a ligand gated ion channel.

-Proteins make up the channel and are embedded in the membrane


-They have a channel and receptor site


-Essentially have to be open or closed at any given time.

Describe a G-protein coupled receptor.

-Second messenger system


-Protein embedded in the cell- Goes through lipid bilayer 7 times


-GDP --> GTP which binds to a plasma protein; Then creates a secondary message response


-cAMP and calcium are both prevalent examples

Describe an enzyme-linked receptor.

-Specific ligand binds to BOTH proteins at the SAME TIME, bringing the two proteins together that cause a reaction to phosphorylate different proteins; Reactions then trigger a signal.


-Also called "catalytic receptors"


-Extracellular side binds ligand; Intracellular side acts as an enzyme!!!


-In summary: Enzyme linked receptors essentially turn an extracellular chemical signal into enzyme activity inside the cell.


-Regulates gene transcription and primarily CELL GROWTH.

Describe an intracellular receptor.

-Has to be lipophillic


-Inside the cell, they connect with a receptor


-Happens in the cytosol or nucleus


-Whole complex can bind to the DNA and trigger more protein production


-Ex: Steroid hormones