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104 Cards in this Set

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Temperature descriptor for: Pseudomonas fluorescens
mesophile
Temperature descriptor for: Bacillus stearothermophilus
mesophile
Temperature descriptor for: Serratia marcescens
Thermophile
Temperature descriptor for: Saccharomyces cervisiae
mesophile
Temp range for: psychrophiles
-5 -15 C
Temp range for: mesophiles
20 - 45 C
Temp range for: thermophiles
45 - 70 C
Antibiosis - def'n
biological interaction between two or more organisms that is detrimental to at least one of them
Antibotic testing outcomes
1. Sensitive
2. Resistant
Sensitive, in terms of antibiotic testing
Limited growth
Resistant, in terms of antibiotic testing
No growth allowed
Spectrum of antibiotic resistance:
Broad
Narrow
Limited
Broad Resistance - def'n
Kills or inhibits a wide range of bacteria. e.g., gram ⊖ & ⊕ bacteria
Narrow Resistance - def'n
Kills either Gram - or +, not both
Limited resistance - def'n
Effective against a particular organism
Rhizobium - def'n
Nitrogen-fixing bacteria found in the nodules of plants
Azotobacter - desc
Motile, oval or spherical bacteria, aerobic, free-living soil microbes which play an important role in the nitrogen cycle
Enterobacteriae Media tests - list
Glucose broth
Lactose broth
Clark & Lubbs
SIM Tubes
Nitrate Broth
Citrate slant
Enterobacteriaceae - desc
rod-shaped, have Gram-negative stains, and they are facultative anaerobes, fermenting sugars to produce lactic acid and various other end products. Most also reduce nitrate to nitrite
YEPD - desc
Yeast Extract Peptone Dextrose is a complete medium for yeast growth
TSB Media - desc
Tryptic Soy Broth. For bacteria
Kirby-Bauer disk diffusion technique - desc
Determines a bacterias resistant/sensitvity to an antibiotic by measuring the Z.O.I (Zone of inhibition)
Nitrogen fixing bacteria convert ___ to ___
Nitrogen fixing bacteria convert N2_ to _NH3_
OPNG - desc
Analog of lactose; yellow color
Operon - desc
Set of genes regulated by one promoter
The lac operon is ________ when ____ is low
The lac operon is _induced_ when _glucose_ is low
Enzyme induction via lac operon can be found in ___________
Enzyme induction via lac operon can be found in _E. coli_
Enterobacteriaceae family ferment _____ to _____
Enterobacteriaceae family ferment _glucose_ to _pyruvate_
β-galactosidase
intracellular enzyme that cleaves the disaccharide lactose into glucose and galactose
Operation of an operon can be _____ or _____
Operation of an operon can be _induced_ or _repressed_
Mixed Acid Pathways - list
Lactic Acid
Acetic Acid
Formic Acid
Succinate
Ethanol
By-products of Mixed Acid Pathways - list
CO₂ & H₂
Bacteria that make use of mixed-acid pathways - list
Coliforms:
E. coli
Shigella
Salmonella
Klebsiella
Bacteria that make use of 2,3 butanediol pathway - list
non-coliforms:
Enterobacter
Serratia
Erwinia
Fecal enterics/Coliforms - pathogenicity
not good
non-Fecal enterics/non-Coliforms - pathogenicity
good!
Fecal enterics/coliforms - list
E. coli
Shigella
salmonella
Klebsiella
NON-Fecal enterics/NON-coliforms - list
Enterobacter
Serratia
Erwinia
Clarks & Lubbs media - tests
Glucose fermentation
Methyl Red - Purpose
Identifies Mixed acid fermentation of glucose
Methyl red: + Result
Turns red
Methyl red: medium
Clark & Lubbs
Voges-Proskauer: medium
Clark & Lubbs
Voges-Proskauer: + Result
Pink/Red color
Voges-Proskauer: Purpose
Reacts with acetoin
Nitrate Reduction test: medium
nitrate broth
Nitrate Reduction test: desc
Add nitrate I & II. If no pink color, add zinc.
Tests for enterobactiace
Nitrate Reduction test: + Results
Pink: NO -> NO2
Pink when Zinc added: Zinc reduced NO
Starch utilization test: + results
Clear area around the bacterial streak
Indole Production test: purpose
tests if species can turn tryptophan into pyruvate, which can then be broken down to indole
Hydrogen sulfide test: + Result
Blackening of medium
Indole Production- medium
SIM
Indole Production: reagent
Kovac's reagent
Indole Production: + Result
Red color
Citrate utilization test: medium
Citrate broth
Citrate utilization test: + Result
turbidity
Citrate slant test: + Result
Turned blue; citrate used
growth; ammonia broken down
EMB Plate - Purpose
Isolates fecal coliforms. Lactose/sucrose selective for fermenters (coliforms), dyes inhibit Gram-positive bacteria
EMB Plate: + Result
Pink: fermentation, little acid: Possible coliform
Dark Purple & Green: Fermentation & lots of acid: Probable coliform
Growth, no color: No fermentation: non-coliform
HEK Plate - Selective/Differential?
Selective & Differential
EMB Plate: Selective/Differential?
Selective & Differential
HEK Plate - How differential?
Isolates enteric species, salmonella, shigella
HEK Plate - How selective?
Inhibits Gram +
HEK Plate - differentiates between . . .
fermenters & non-fermenters
HEK Plate Fermenters: List
Enterobacter
E. Coli
HEK Plate Non-Fermenters: List
Proteus
Salmonella
Shigella
MacConkey Plates: Selective/Differential?
Selective & Differential
Starch Plates: Selective/Differential?
Selective
MacConkey Plate: How selective?
Selects for Gram -; Salts inhibit Gram +
MacConkey Plate: How differential?
Detects lactose fermenters
MacConkey Plate: + Result
Pink/red = Fermentation
Starch Plate: Purpose
Tests for starch hydrolysis
Added iodine turns starch brown. Clear zone means starch was hydrolyzed: +
Citrate Slant - Selective/Differential?
Selective & Differential
Citrate Slant - Results
Blue + Growth - citrate used ( pH increases as ammonia broken down)
Growth only: Citrate Used
No Growth - Citrate NOT used
Citrate Slant test - Purpose
Tests for ability of bacteria to use citrate as carbon source, differentiates among enterobacteriacae
MacConkey Agar test - Purpose
Isolates and Differentiates members of enterobacteriaceae on he ability to ferment lactose
HEK Plate - Purpose
Isolates and differentiates salmonella & shigella from other gram-negative enteric organisms
Nitrate Reduction Test - Purpose
Detects species that can reduce nitrate to nitrite
Durham tube - desc
Traps gas evolved from respiration
Voges-Proskauer test - Purpose
Identifies organisms able to produce acetoin from the breakdown of glucose during a 2,3-butanediol fermentation
Acetoin
used as an external energy store by a number of fermentive bacteria
Cyanobacteria - Desc
Large class of photosynthetic bacteria that use H₂O
Cyanobacteria - Characteristics
Slimy coating
Phycobilins
Varied cell shape
Some fix nitrogen
Gram ⊖
Gram -
Phycobilin
Accessory pigments in cyanobacteria that absorb light
Lactic Acid Bacteria - Characteristics
Gram ⊕
Catalase ⊖
Homolactic
Only waste product is Lactic Acid
Heterolactic
Lactic Acid is produced as waste, as well as Some gas byproduct
Name it!
Is it a cyanobacteria or algae?
anabaena

cyanobacteria
Name it!
Is it a cyanobacteria or algae?
chlamydomonas

alga
Name it!
Is it a cyanobacteria or algae?
gloeocapsa

cyanobacteria
Name it!
Is it a cyanobacteria or algae?
lyngbya

cyanobacteria
Name it!
Is it a cyanobacteria or algae?
merismopedia

cyanobacteria
Name it!
Is it a cyanobacteria or algae?
oscillatoria

cyanobacteria
Name it!
Is it a cyanobacteria or algae?
spirogyra

algae
Name it!
Is it a cyanobacteria or algae?
ulothrix

algae
Name it!
Is it a cyanobacteria or algae?
volvox

algae
Formula for calculating pfu
# plaques
-------------------------------------------
volume plated * dilution factor
coliform - def'n
pertaining to the colon-aerogenes group, or the Escherichia coli species of microorganisms, which comprises most of the intestinal flora in humans and other animals. Presence of coliforms is used as a standard indication of water pollution with fecal matter.
Enteric bacteria - def'n
in the family Enterobacteriaceae. These bacteria reside normally in the guts of many animals, including humans, and some are pathogenic, causing disease in certain animal species. Many cases of food poisoning are caused by infection with enteric bacteria
Glucose & Lactose broth: + results
red & bubbles - Mixed acids fermenter
red, NO bubbles - 2,3 butanediol pathway
yellow: peptone breakdown
amber: no reaction
Acetoin
Used as an external energy store by a number of fermentive bacteria
Motility stab: Purpose
Tests for motility
Motility stab: + Result
Outward red growth
Hydrogen Sulfide test: Purpose
Checks for Enteric gram negative bacilli by checking for the enzyme thiosulfate reductase which is produced by various intestinal microorganisms. So if bacillus subtilis can produce this enzyme then this test will give you a pos. (black in color) result.