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802 Cards in this Set
- Front
- Back
Explain Aristoteles’ view
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Spontaneous Genesis: living organisms could develop out from nonliving matter
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Anton van Leeuwenhoeck
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Early experiments, covex glass lenses. "First microscopes"
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Francesco Redi’s experiment
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Containers with meat, covered and uncovered, flies etc. (He said. We are "redi" with the meat, Francesco Redi.)
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Edward Jenner
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Vaccination cowpox - Inmunity for disease. First to conduct test in immunity with dead pathogenic cells
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Louis Pasteur
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(1860) S shaped flasks, dust particles trapped -> preventing bacteria get into the broths
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Sergei Winogradsky
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Winogradsky column (display of chemoautotrophy and microbial ecology)
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Robert Koch (1872) and his team.
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Germ Theory of Disease. THEY were busy with disease Anthrax, infected healthy mice with microbes and observed symptoms, resistant ‘spores’, agar-based media to cultivate and study bacteria.
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Koch's 1st postulate:
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The microorganism or other pathogen must be present in all cases of the disease
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Koch's 2nd postulate:
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The pathogen can be isolated from the diseased host and grown in pure culture
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Koch's 3rd postulate:
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The pathogen from the pure culture must cause the disease when inoculated into a healthy, susceptible laboratory animal
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Koch's 4rd postulate:
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The pathogen must be re-isolated from the new host and shown to be the same as the originally inoculated pathogen
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The resolution of a light microscope (LM) is determined by... (2 factors)
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1. numerical Aperture of its lens system
2. Wavelength of the light |
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Maximum resolution of a light microscope (LM) is about...
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about 0.2 micrometers.
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the Focal point is:
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It is the place where the Image is focused after that light is bent by lenses
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microscope Resolution refers to:
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Resolution is the ability of a lens to Separate or Distinguish small objects that are close together;
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The major factor determining the Resolution is:
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the Wavelength of light used
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Absorption (explain):
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When light passes through an object the intensity is reduced depending upon the color absorbed
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Refraction (explain)::
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Direction change of a ray of light passing from one transparent medium to another with different optical density
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Diffraction:
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Light rays bend around Edges, new wavefronts are generated at sharp edges.
The smaller the aperture the lower the definition |
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Dispersion:
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Separation of light into its constituent wavelengths when entering a transparent medium -the change of refractive index with wavelength such as the spectrum produced by a prism or a rainbow
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3 ideas about transmission electron microscopy (TEM)
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1.TEM is operated at high vacuum.
2. TEM focuses beams (ray) of electrons 3. TEM has resolution (0.5nm) about 1,000 times better than light microscope (LM) (0.2 mm) |
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Procaryotic cells (P.C.), explain
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They are cells with lack a true, membrane-enclosed nucleus; The genetic material is located in a nucleoid.
bacteria and archaea are procaryotic; |
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P.C. vary in size. Are they generally smaller or bigger than eucaryotic cells?
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Procaryotic cells are generally SMALLER than most eucaryotic cells;
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Wich size are Bacterial?
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They are extremely small and are most conveniently measured in microns (10-6m = micro m). Generally are unicellular organisms
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How Bacteria reproduce themselves?
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by Binary Fission.
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Explain Gram stain procedure
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It is a Differential staining procedure.
It divides bacteria into gram-positive/gram-negative groups. |
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Gram stain is baded on...(2 factors)
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1. on ability to retain crystal violet when decolorized with an solvent.
2. on the chemical and physical properties of their cell walls. |
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Gram-negative and Gram-positive cells. 1 difference and 1 similarity betwwen.
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- They differ in cell walls.
- Both use flagella for locomotion. |
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In P.C, where is located the plasma membrane?
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Plasma membrane is located inside the cell wall and separated from it by a periplasmic space
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In P.C.. where the genetic material is localized?
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The genetic material is localizedIn a discrete region: the nucleoid
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In P.C. ."Selectively permeable barrier, mechanical cell boundary, nutrient/waste transport, place of many metabolic processes as respiration/photosynthesis, detection of environmental cues for chemotaxis"
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Plasma membrane
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In P.C. "Buoyancy for floating in aquatic environments"
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Gas vacuole
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In P.C. "Protein synthesis its a function of.."
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Ribosomes
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In P.C. who does "Storage of carbon, phosphate, and other substances"
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Inclusion bodies
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In P.C. where is the Localization of genetic material (DNA)
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Nucleoid
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In P.C. Who Contains hydrolytic enzymes and binding proteins for nutrient processing and uptake?
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Periplasmic space
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In P.C. Who gives bacteria shape and protection from lysis in dilute solutions? ah?
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The Cell wall
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In P.C. Who is famous for "Resistance to phagocytosis, adherence to surfaces"
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Capsules and slime layers
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In P.C. who is "Attached to surfaces, and participate on bacterial mating"
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Fimbriae and pili
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In P.C., the Movement is made for?
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Flagella
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In P.C. Survival under harsh environmental conditions
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Endospore
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In P.C. Who match with this def. "Phospholipid bilayer of lipids and proteins with hydrophilic surfaces and a hydrophobic interior (amphipathic)";
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Plasma membrane
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most bacterial membranes lack of...
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Sterols
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Function of plasma membrane in P.C.
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The plasma membrane acts as a boundary: Holding cell constituents together and keeping other substances from entering
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In P.C. substance between the membrane and the nucleoid
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Cytoplasmic matrix
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In P.C. The organelle where protein synthesis occurs; the message encoded in mRNA is translated here
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Ribosome
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In P.C.
Small, closed circular DNA molecules. Replicate independently of the bacterial chromosome, carry genes |
Plasmids
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Polysaccharide polymer found in bacterial cell walls; polysaccharide chains cross-linked by peptide bridges
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Peptidoglycan
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Relatively thin cell wall... Gram+ bacteria oder Gram- bacteria ?
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Gram -
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Cell wall is composed largely of peptidoglycan. Gram+ Bacteria oder Gram - bacteria?
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Gram +
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Noncovalently attachment in cell wall. Gram+ or Gram-Bacteria?
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Gram -
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A thin, threadlike appendage on many procaryotic and eucaryotic cells that is responsible for their motility. We are here talking about Mr...
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Flagella
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Types of Flagella:
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Monotrichous:a single flagellum. Amphitrichous:a single flagellum at each pole. Lophotrichous:a cluster (tuft) of flagella at one or both ends. Peritrichous- plenty of flagella scattered evenly on the surface of the cell
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This enzyme attacks peptidoglycan by hydrolyzing the bond C-N
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Lysozyme
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They are osmotically sensitive. If they are transferred to a dilute solution, they will lyse due to uncontrolled water influx
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Protoplasts and spheroplasts (maurice example)
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It inhibits peptidoglycan synthesis in the cell wall
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Penicillin
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The Bacterial Endospore, explain
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It is a special, resistant, dormant structure which enables bacteria to resist harsh environmental conditions
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prokaryotic cells - genetic material
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usually found in single circular chromosome
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prokaryotic cells - location of genetic information
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nuclear region (nucleoid)
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prokaryotic cells - nucleolus
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absent
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prokaryotic cells - histones
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absent
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prokaryotic cells - extrachromosomal dna
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in plasmids
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prokaryotic cells - mitotic spindle
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absent
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prokaryotic cells - plasma membrane
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fluid mosaic structure lacking sterols
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prokaryotic cells - internal membranes
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only in photosynthetic organisms
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prokaryotic cells - endoplasmic reticulum
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absent
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prokaryotic cells - respiratory enzymes
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cell membrane
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prokaryotic cells - chromatophores
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present in photosynthetic bacteria
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prokaryotic cells - chloroplasts
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absent
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prokaryotic cells - golgi apparatus
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absent
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prokaryotic cells - lysosomes
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absent
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prokaryotic cells - peroxisomes
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absent
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prokaryotic cells - ribosomes
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70S
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prokaryotic cells - cytoskeleton
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absent
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prokaryotic cells - cell wall
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peptidoglycan found on most cells
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prokaryotic cells - external layer
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capsule or slime player
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prokaryotic cells - flagella
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when present, consist of fibrils of flagellin
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prokaryotic cells - cilia
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absent
|
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prokaryotic cells - pili
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present as attachment or conjugation pili in some prokaryotic cells
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prokaryotic cells - cell division
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binary fission
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prokaryotic cells - sexual exchange of genetic material
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not part of reproduction
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prokaryotic cells - sexual or asexual reproduction
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only asexual reproduction
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eukaryotic cells - genetic material
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typically found in paired chromosomes
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eukaryotic cells - location of genetic information
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membrane-enclosed nucleus
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eukaryotic cells - nucleolus
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present
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eukaryotic cells - histones
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present
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eukaryotic cells - extrachromosomal dna
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in organelles, such as mitochondria and chloroplasts, and in plasmids
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eukaryotic cells - mitotic spindle
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present during cell division
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eukaryotic cells - plasma membrane
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fluid mosaic structure containing sterols
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eukaryotic cells - internal membranes
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numerous membrane-enclosed organelles
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eukaryotic cells - endoplasmic reticulum
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present
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eukaryotic cells - respiratory enzymes
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mitochondria
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eukaryotic cells - chromatophores
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absent
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eukaryotic cells - chloroplasts
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present in some
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eukaryotic cells - golgi apparatus
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present
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eukaryotic cells - lysosomes
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present
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eukaryotic cells - peroxisomes
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present
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eukaryotic cells - ribosomes
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80S in cytoplasm and on endoplasmic reticulum, 70S in organelles
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eukaryotic cells - cytoskeleton
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present
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eukaryotic cells - cell wall
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cellulose, chitin, or both found on plant and fungal cells
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eukaryotic cells - external layer
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pellicle, test, or shell in certain protists
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eukaryotic cells - flagella
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when present, consist of complex membrane-enclosed structure with "9+2" microtubule arrangement
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eukaryotic cells - cilia
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present as structures shorter than, but similar to, flagella in some eukaryotic cells
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eukaryotic cells - pili
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absent
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eukaryotic cells - cell division
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mitosis and/or meiosis
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eukaryotic cells - sexual exchange of genetic material
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meiosis
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eukaryotic cells - sexual or asexual reproduction
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sexual or asexual reproduction
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all prokaryotes are
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bacteria
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eukaryotes include
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all plants, animals, fungi, and protists
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name of two prokaryotic domains
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arachea and bacteria
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do arachea cause disease?
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not as far as we know at this point
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average range of size of prokaryotes
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0.5 to 2.0 micrometers in diameter
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bacteria, surface-to-volume ratio
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large
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three basic shapes of bacteria
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spherical, rodlike, and spiral
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coccus
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sphere
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bacillus
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rod
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vibrio
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comma-shaped
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spirilium
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rigid, wavy shape
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spherochete
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corkscrew shaped
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diplo-
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division in one plane; cells in pairs
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strepto-
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division in one plane; cells in chains
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tetrads
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division in two planes; four cells arranged in a cube
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sarcinae
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division in three planes; eight cells arranged in a cube
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staphylo-
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division in random planes; grapelike clusters
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purpose of cell wall
|
maintains characteristic shape and prevents cell from bursting when fluids flow into the cell via osmosis
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peptidoglycan is also called
|
murein
|
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most important component of bacterial cell wall
|
peptidoglycan
|
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outer membrane
|
bilayer membrane found on outermost layer of cell wall in gram-negative bacteria
|
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lipopolysaccharide (LPS) aka
|
endotoxin
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LPS
|
important part of outer membrane that is not released until cell walls of dead bacteria are broken down
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LPS composition
|
polysaccharaides and lipid A (lipid A conveys toxic properties)
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periplasmic space
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gap between cell membrane and cell wall
|
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periplasmic space is active area of
|
cell metabolism
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periplasm
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petidoglycan, protein constituents, and metabolites found in the periplasmic space
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peptidoglycan (murein) comprised of
|
two alternating sugar units: (1) n-acetylglucosamine (NAG) and (2) n-acetylmuramic acid (NAM)
|
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peptidoglycan (murein) sugars are joined by
|
short peptide chains that consist of four amino acids (tetrapeptides)
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outer membrane is attached to peptidogycan by
|
a continuous layer of lipoprotein molecules
|
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proteins called _____ form channels through the OM
|
porins
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the outer membrane contains _______ and ______
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surface antigens and receptors
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periplasmic space contains
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the cell wall, digestive enzymes and transport proteins
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gram-positive bacteria lack both _____ and _____
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an OM and a periplasmic space
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gram-positive bacteria have a relatively thick layer of
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peptidoglycan (60-90%)
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gram-negative bacteria have
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a more complex cell wall with a thin layer of peptidogycan (10-20%)
|
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acid-fast bacteria, characteristics
|
thick, like that of gram-positive bacteria, but has much less peptidoglycan and about 60% lipid
|
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acid-fast bacteria are found in the genus
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Mycobacterium sp.
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cell wall of acid-fast bacteria is mainly composed of
|
lipids
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the lipid component of acid-fast bacteria is
|
mycolic acid
|
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acid-fast bacteria stain
|
gram-positive
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antibiotic penicillin blocks what to damage cell walls?
|
the final stages of peptidogycan synthesis
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enzyme lysozyme digests what?
|
peptidoglycan
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lysozyme is found
|
in tears and other human body secretions
|
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bacterial cells typically contain in their cytoplasm
|
ribosomes, nucleoid region, vacuoles, and (some) endospores
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ribosomes consist of
|
ribonucleic acid (rna) & protein
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ribosomes serve as sites of
|
protein synthesis
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ribosomes are abundant in
|
the cytoplasm of bacteria
|
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# of ribosomes in bacteria and eukaryotes
|
70S in bacteria; 80S in eukaryotes
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|
long chains of ribosomes are called
|
polyribosomes
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streptomycin & erythromycin function against bacteria by
|
binding specifically to 70S ribosomes and disrupting bacterial protein synthesis
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nuclear region/nucleoid consists of
|
dna, rna, & protein
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dna in bacteria is structured as
|
usually one large, circular chromosome
|
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vibrio cholerae nuclei contain
|
two chromosomes, one large and one small
|
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plasmids are
|
extrachromosomal pieces of smaller, circular dna
|
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photosynthetic bacteria and cyanobacteria contain
|
internal membrane systems, aka chromatophores
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chromatophores are derived from
|
the cell membrane and contain the photosynthetic pigments
|
|
nitrifying bacteria also have
|
internal membranes
|
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inclusions
|
small bodies inside the bacterial cytoplasm
|
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granules
|
not membrane bound and contain densely compacted substances (glycogen or polyphosphate)
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vesicles
|
specialized membrane-enclosed structures that contain gas or poly-B-hydroxybutyrate (lipid)
|
|
endospores
|
centralized resting structure found in bacteria such as Bacillus sp. and Clostridium sp.
|
|
endospores function to
|
help the bacterial cells survive when conditions become unfavorable
|
|
endospores are highly resistant to
|
heat, drying, acids, bases, certain disinfectants and radiation
|
|
external structure of bacteria
|
bacteria may have structures that extend beyond or surround the cell wall
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|
types of external bacterial structures
|
flagella and pili (which extend from the cell membrane through the cell wall and beyond) and capsules and slime layers (which surround the cell wall)
|
|
bacterial flagella - monotrichous
|
bacteria with a single polar flagellum located at one end (pole)
|
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bacterial flagella - amphitrichous
|
bacteria with two flagella, one at each end
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bacterial flagella - peritrichous
|
bacteria with flagella all over the surface
|
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bacterial flagella - atrichous
|
bacteria without flagella
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bacterial flagella - lophotrichous
|
two or more flagella
|
|
endosymbiotic theory
|
organelles of eukaryotic cells arose from prokaryotic cells that had developed a symbiotic relationship with the eukaryote-to-be
|
|
symbiosis
|
relationship between two different kinds of organisms that live in close contect
|
|
endosymbiosis
|
two different kinds of organisms living in close contact, where one lives inside the other
|
|
simple diffusion
|
the net movement of particles from a region of higher to lower concentration
|
|
facilitated diffusion
|
diffusion down a concentration gradient and across a membrane with the assistance of special pores or carrier molecules
|
|
osmosis
|
the diffusion of water from an area of higher water concentration to an area of lower water concentration through a semipermiable membrane
|
|
active transport
|
movemebt of molecules and ions against concentration gradients from regions of lower concentration to ones of higher conecntration; requires ATP
|
|
osmotic pressure
|
pressure required to prevent the net flow of water by osmosis; the least amount of hydrostatic pressure req'd to prevent movement of water from solution into pure water is the osmotic pressure of the solution
|
|
positive chemotaxis
|
net result is movement towards the attractant (nutrients)
|
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negative chemotaxis
|
net result is movement away from the repellent
|
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pilus, pili
|
tiny, hollow projections used to attach bacteria to surfaces; not involved in movement
|
|
F-pili
|
long conjugation pili, "sex" pili
|
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fimbriae
|
short attachment pili
|
|
glycocalyx
|
all polysaccharide/polypeptide-containg substances found external to cell wall, including capsules, slime layers
|
|
all bacteria have at least ________ layer
|
a thin slime layer
|
|
capsule
|
protective structure outside the cell wall of the organism from which it is secreted
|
|
capsules found in
|
only certain bacteria
|
|
chemical composition of capsules
|
unique to the strain of bacteria that secreted it
|
|
encapsulated bacteria are able to
|
evade host defense mechanisms (phagocytosis)
|
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slime layer
|
less tightly bound to cell wall; thinner than a capsule
|
|
slime layer, function of
|
protects cell against drying; traps nutrients and binds cells together (biofilm)
|
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endocytosis
|
moving substance by forming an invagination and surrounding substances from outside the cell
|
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exocytosis
|
vesicles inside cell fuse with plasma membrane and extrude contents from the cell
|
|
Do prokaryotes or eukaryotes contain nucleic acids?
|
Both
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|
Do prokaryotes or eukaryotes contain proteins?
|
Both
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Do prokaryotes or eukaryotes contain lipids?
|
Both
|
|
Do prokaryotes or eukaryotes contain carbohydrates?
|
Both
|
|
Do prokaryotes or eukaryotes have DNA that is not enclosed within a membrane and is one circular chromosome?
|
Prokaryotes
|
|
What to prokaryotes and eukaryotes use the same kind of chemical reactions for?
|
To metabolize food, build proteins and store energy
|
|
Do prokaryotes or eukaryotes have DNA that is not associated with histones but with other proteins?
|
Prokaryotes
|
|
Do prokaryotes or eukaryotes lack membrane enclosed organelles?
|
Prokaryotes
|
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Do prokaryotes or eukaryotes have cell walls that almost always containt he complex polysaccharide peptidoglycan?
|
Prokaryotes
|
|
Do prokaryotes or eukaryotes usually divide by binary fission?
|
Prokaryotes
|
|
Do prokaryotes or eukaryotes have DNA that is found in the cell's nucleus?
|
Eukaryotes
|
|
Do prokaryotes or eukaryotes have DNA that is associated with histones?
|
Eukaryotes
|
|
Do prokaryotes or eukaryotes have membrane enclosed organelles such as mitochondria?
|
Eukaryotes
|
|
Do prokaryotes or eukaryotes have cell walls, when present, are chemically simple?
|
Eukaryotes
|
|
Do prokaryotes or eukaryotes usually divide by mitosis?
|
Eukaryotes
|
|
What does coccus mean?
|
Sphere/Round
|
|
What does bacillus mean?
|
staff/rod-shaped
|
|
What does spirilla mean?
|
rigid with a spiral/corkscrew shape
|
|
What does Strepto- mean?
|
chains of cells
|
|
What does Staphylo- mean?
|
Clusters of cells
|
|
What does Diplo- mean?
|
two cells
|
|
What does tetrad mean?
|
four cells
|
|
What does sarcinae mean?
|
Cube of 8 cells
|
|
What does vibrio mean?
|
Curved Rod
|
|
What does Spirochete mean?
|
Flexible with spiral shape
|
|
What is glycocalyx?
|
a gerneral term used for substances that surround cells.
|
|
What is glycocalyx composed of?
|
polysaccharide, polypeptide or both
|
|
What does a glycocalyx capsule do?
|
contributes to the degree to which a pathogen causes disease and protects from phagocytosis.
|
|
What is the function of extracellular polysaccharide (EPS)?
|
enables a bacterium to attach to a variety of surfaces.
|
|
How do prokaryotic flagellum move?
|
clockwise or counterclockwise around its long axis
|
|
How do Eukaryotic flagellum move?
|
in a wavelike motion
|
|
What is taxis?
|
the movement of a bacterium toward or away from a particular stimulus.
|
|
What are axial filaments?
|
bundles of fibrals that arise at the ends of the cell beneath an outer sheath and spiral around the cell.
|
|
What is the function of fimbriae?
|
enables a cell to adhere to surfaces, including that of other cells.
|
|
What is the function of pili?
|
to join bacterial cells in preparation for the transfer of DNA from one cell to another.
|
|
Are pili or fimbriae longer?
|
Pili
|
|
How man pili are there per cell?
|
one or two
|
|
How many fimbriae are there per cell?
|
A couple to hundreds
|
|
What is the rigidity of the prokaryotic cell wall?
|
semi-rigid
|
|
What is the function of the prokaryotic cell wall?
|
gives structure to and protects the cell.
|
|
What does the prokaryotic cell wall surround?
|
the underlying plasma membrane.
|
|
What does the prokaryotic cell membrane prevent?
|
Osmotic Lysis.
|
|
What does the prokaryotic cell wall contribute to?
|
the ability to cuase disease in some species.
|
|
What is the prokaryotic cell wall a site of action for?
|
some antibiotics
|
|
What is the prokaryotic cell wall in bacteria made of?
|
peptidoglycan.
|
|
How many layers of peptidoglycan does a gram positive cell wall have?
|
Many
|
|
Do gram positive cell walls have teichoic acids?
|
Yes
|
|
How many layers of peptidoglycan does a gram negative cell wall have?
|
one or a few
|
|
Do gram positive cell walls have teichoic acids?
|
No
|
|
Are gram positive or gram negative cells more susceptible to rupture?
|
gram negative
|
|
What is Peptidoglycan?
|
it's what the bacterial wall is composed of.
|
|
What does Peptidoglycan consist of?
|
a repeating disaccharide attached by polypeptides.
|
|
What is endotoxin?
|
part of the outer portion of the cell wall of most gram negative bacteria.
|
|
When is endotoxin released?
|
Upon destruction of the cell.
|
|
How does alcohol affect gram positive cells during gram staining?
|
it dehydrates the peptidoglycan
|
|
How does alcohol affect gram negative cells during gram staining?
|
dissolves outer membrane and leaves holes in peptidoglycan.
|
|
How does exposure to lysozyme affect the cell?
|
it damages it
|
|
How to antibiotics such as penicillin affect the cell?
|
destroys the bacteria by interfering with the formation of the peptide cross-bridges of peptidoglycan, preventing the formation of a functional cell wall.
|
|
Where does the phospholipid bilayer of the plasma membrane lie?
|
Inside the cell wall
|
|
Where is the metabolic machinery of the cell located?
|
On the plasma membrane
|
|
Does the plasma membrane of the cell contain peripheral proteins?
|
Yes
|
|
How viscous is the plasma membrane?
|
as viscous as olive oil.
|
|
what way do the phospholipids move in the plasma membrane?
|
rotate and move laterally.
|
|
What is meant meant by the term "selective permeability"?
|
allows passage of some molecules but not others across the plasma membrane.
|
|
What is simple diffusion?
|
movement of a solute from an area of high concentration to an area of low concentration (down its concentration gradient) until equilibrium is reached.
|
|
What is facilitated diffusion?
|
solute combines with a transport protein in the membrane, to pass from one side of the membrane to the other. The molecule is moving down its concentration gradient.
|
|
What is osmosis?
|
movement of water across a selectively permeable membrane from an area of higher water concentration to an area of lower water concentration.
|
|
What is active transport?
|
requires a transporter protein and ATP. The solute molecule is pumped against its concentration gradient.
|
|
What is osmotic pressure?
|
the pressure needed to stop the movement of water across the membrane.
|
|
What is group translocation?
|
a special form of active transport found only in prokaryotes, movement of a sucstance requires a specific transport protein. The substance is chemically altered during transport to prevent it from escaping the cell.
|
|
What does isotonic mean?
|
a solution in which, after immersion of cell, osmotic pressure is equal across the cell's membrane.
|
|
What does hypotonic mean?
|
a solution that has a lower concentration of solutes than an isotonic solution.
|
|
What does hypertonic mean?
|
a solution that has a higher concentration of solutes than an isotonic solution
|
|
What is cytoplasm?
|
the substance inside the plasma membrane
|
|
What percentage of water does cytoplasm contain?
|
80%
|
|
What is the bacterial nucleoid?
|
the region in a bacterial cell containing the chromosome.
|
|
What is a bacterial plasmid?
|
small, circular DNA molecule that replicates independently of the chromosome.
|
|
What shape do bacterial chromosomes have?
|
short, thick, rod-like bodies
|
|
What is a ribosome?
|
sites of protein synthesis
|
|
What #S ribosomes does eukaryotic cells have?
|
80S
|
|
What #S ribosomes does prokaryotic cells have?
|
70S
|
|
Where can membrane-bound ribosomes be found?
|
In the rough ER.
|
|
What are inclusions?
|
reserve deposits of nurtients that can be used in times of low resource availability
|
|
What is step #1 in endospore formation?
|
The sport septum (invagination of the plasma membrane) begins to isolate the newly replicated DNA and a small portion of cytoplasm. This results in the formation of 2 separate membrane bound structures.
|
|
What is step #2 in endospore formation?
|
the plasma membrane starts to surround the DNA, cytoplasm and the new membrane encircling the material isolated before, forming a double layered membrane bound structure called a forespore
|
|
What is step #3 in endospore formation?
|
thick peptidoglycan layers are laid down between the two membranes of the forespore.
|
|
What is step #4 in endospore formation?
|
a think spore coat of protein forms around the outer membrane of the forespore, which is responsible for the durability of the endospore.
|
|
What is step #5 in endospore formation?
|
when the endospore matures, the cell wall ruptures, killing hte cell and freezing the endospore. It is now metabolically inert.
|
|
What does the nucleus of the cell contain?
|
the cell's DNA
|
|
What is the endoplasic reticulum?
|
network of membranes extending from the nuclear membrane
|
|
What happens to the molecules when they go through the Rough ER?
|
they are processed and sorted and then incorporated into ogranelle membranes, inserted into the plasma membrane or secreted via exocytosis.
|
|
What happens to the molecules when they go through the Smooth ER?
|
Stores and releases
|
|
What are ribosomes?
|
site of protein synthesis
|
|
What does the golgi complex do?
|
modifies, sorts and packages proteins received from the rough ER.
|
|
What are lysosomes?
|
membrane enclosed vesicles that form from the Golgi complex and contain powerful digestive enzymes.
|
|
What do lysosomes do?
|
They digest worn out organelles and their own cellular contents.
|
|
What are vacuoles?
|
space in the cytoplasm enclosed by a membrane called a tonoplast
|
|
What do vacuoles do?
|
they are temporary storage for biological molecules and ions, bring food into cells, provide structural support and store metabolic wastes.
|
|
What do mitochondria do?
|
produce most of the cell's ATP.
|
|
Where does the aerobic phaser of cellular respiration occur?
|
in the mitochondria.
|
|
What are the peroxisomes used for?
|
they contain enzymes that use molecular oxygen to oxidize various organic substances
|
|
What do peroxisomes produce and then destroy?
|
H2O2
|
|
What are centrosomes?
|
Denise areas of cytoplasm containing the centrioles
|
|
What is the "endosymbiotic theory"?
|
the theory that large bacterial cells lost their cell walls and engulfed smaller bacteria.
|
|
How do they support the "endosymbiotic theory"?
|
mitochondria and chloroplasts resemble bacteria in size and shape, they divide on their own and contain their own DNA and have 70S ribosomes.
|
|
ABC (ATP-Binding Cassette) transportter
|
A membrane transport system consisting of three proteins, one of which hydrolyzes ATP, to transport specific nutrients into the cell
|
|
Capsule
|
a polysaccharide or protein outermost layer, usually rather slimy, present on some bacteria
|
|
Chemotaxis
|
Directed movement of an organism toward (positive) or away from (negative) a chemical gradient
|
|
Cytoplasmic membrane
|
the permeability barrier of the cell, separating the cytoplasm from the environment
|
|
Endospore
|
A highly heat-resistant, thick-walled, differentiated structure produced by certain gram-positive Bacteria
|
|
Flagellum
|
A long, thin cellular appendage capable of rotation in prokaryotic cells and responsible for swimming motility
|
|
Gas vesicles
|
Gas-filled cytoplasmic structure bounded by protein and conferring buoyancy on cells
|
|
Gram-negative
|
A prokaryotic cell whose cell wall contains small amounts of peptidoglycan, and an outer membrane, containing lipopolysaccharide, lipoprotein, and other complex macromolecules
|
|
Gram-positive
|
A prokaryotic cell whose cell wall consists chiefly of petidoglycan and lacks the outer membrane of gram-negative cells
|
|
Group Translocation
|
an energy-dependent transport process in which the substance transported is chemically modified during the tranport process.
|
|
Lipopolysaccharide (LPS)
|
lipid in combination with polysaccharide and protein, which forms the major portion of the outer membrane in a gram-negative Bacteria
|
|
Magnetosomes
|
particles of magnetite (Fe3O4) organized into nonunit membrane-enclosed structures in the cytoplasm of magnetotactic Bacteria
|
|
Morphology
|
The SHAPE of a cell: rod, cocus, spirillum, and the like
|
|
Outer Membrane
|
a phospholipid and polysaccharide containing unit membrane that lies external to the peptidoglycan layer in cells of gram-negative Bacteria
|
|
Peptidoglycan
|
A polysaccharide composed of alternating repeats of acetylglucosamine and acetlymuramic acid arranged in adjacent layers and cross-linked by short peptides
|
|
Periplasm
|
a gel-like region between the outer surface of the cytoplasmic membrane and the inner surfance of the lipopolysacharide layer of gram-negative Bacteria
|
|
Peritichorous
|
A pattern of flagellation where flagella are located in many places around the surface of the cell
|
|
Phototaxis
|
Movement of an organism toward light
|
|
Polar
|
In reference to flagellation, having flagella emanating fromone or both poles of the cell
|
|
Poly-Beta-Hydroxybutyrate (PHB)
|
A common storage material prokaryotic cells consisting of a polymer of B-Hydroxybutyrate or anotgher B-alkanoic acid or mixtures of B-alkanoic acids
|
|
Protoplast
|
An osmotically protected cell whose cell wall has been removed
|
|
Resolution
|
The ability to distinguish two objects as distinct and separate
|
|
S-Layer
|
An outermost cell surface layer composed of protein or glycoprotein present on some Bacteria or Archaea
|
|
Sterols
|
Hydrophobic heterocyclic ringed molecules that stregthen the cytoplasmic membrane of eukaryotic cells and a few prokaryotes.
|
|
most bacteria range from what in regards to diameter and length
|
0.2 to 2.0 um in diameter
|
|
basic shapes of bacteria
|
spherical coccus, rod-shaped bacillus and spiral
|
|
when cocci divide to reproduce the cells can remain
|
attached to one another
|
|
diplococci
|
are cocci that remain in pairs after dividing
|
|
streptococci
|
cocci that remain attached in chain like structures
|
|
tetrads
|
cocci that divide in two planes and remain in groups of four
|
|
sarcinae
|
divide in three planes and remain attached in cubelike groups of 8
|
|
staphylococci
|
divide in multiple planes and from grapelike clusters
|
|
Most bacilli appear as single rods called
|
single bacilli
|
|
Diplobacilli appear
|
in pairs after division
|
|
what type of bacilli occur in chains
|
streptobacilli
|
|
coccobacilli
|
are oval and look so much like cocci
|
|
vibrio
|
bacteria that look like curved rods
|
|
spirilla
|
a helical shape like a corkscrew
|
|
spirochetes
|
group of spirals that are helical and flexible
|
|
monomorphic
|
bacteria that maintains a single shape
|
|
pleomorphic
|
can have many shapes not just one
|
|
how would you be able to identify streptocci thru a microscope?
|
because of it's chain like structure
|
|
Does a prokaryotic cell contain a nucleus?
|
No
|
|
does prokaryotic cells have membrane-enclosed organelles
|
no
|
|
what does the flagella of a prokaryotic cell consist of
|
two protein building blocks
|
|
glycocalyx in prokaryotes?
|
is secreted on the surface and is present as a capsule or slim layer. (Sugar coat)
|
|
does a prokaryote contain a cell wall?
|
It's usually present and is chemically complex (includes peptidoglycan)
|
|
plasma membrane in prokaryotes
|
no carbohydrates and generally lacks sterols
|
|
does a prokaryote contain a cytoplasm or streaming
|
no cytoplasmic streaming or cytoskeleton
|
|
size of the ribosomes in a prokaryotic cell
|
70S
|
|
the chromosomes (DNA) of prokaryotic cells
|
are usually single circular chromosome
|
|
what do prokaryotic cells lack in their chromosomes
|
histones
|
|
how does cell division occur in prokaryotic cells
|
binary fission
|
|
sexual recombination in prokaryotic cells
|
does not occur only transfer of DNA
|
|
size of a Eukaryotic cell
|
10-100um in diameter
|
|
does a eukaryotic cell contain a nucleus?
|
yes, a true nucleus (nuclear membrane and nucleoli)
|
|
Are membrane-Enclosed organelles present in eukaryotic cells?
|
Yes, they include (lysosomes, endoplasmic reticulum, mitochondria and chloroplasts)
|
|
The Flagella in eukaryotes is
|
complex, consist of multiple microtubules
|
|
is Glcocalyx present in Eukaryotic cells?
|
yes, but it is only present in cells that lack a cell wall
|
|
the cell wall of eukaryotic cells is
|
chemically simple includes; cellulose and chitin
|
|
the plasma membrane of eukaryotic cells is
|
sterols and carbohydrates that serve as receptors
|
|
the cytoplasm of eukaryotic cells have
|
cytoskeleton and cytoplasmic streaming
|
|
what size are the ribosomes of a eukaryotic cell and in organelles?
|
80S and (70S in organelles
|
|
the chromosomes (DNA) of eukaryotic cells are
|
multiple linear chromosomes with histones
|
|
cell division of eukaryotic cells involves
|
mitosis
|
|
sexual recombination in eukaryotic cells involves
|
meiosis
|
|
motility
|
the ability of an organism to move by itself
|
|
what is found in prokaryotic cells but not eukaryotic cells
|
peptidoglycan
|
|
how does most bacteria multiply
|
by binary fission
|
|
what type of bacteria can assume several shapes
|
pleomorphic
|
|
capsules may protect pathogens from what
|
phagocytosis
|
|
what does a flagella consist of
|
filament, hook and basal body
|
|
why would a prokaryotic flagella rotate
|
to push the cell
|
|
what type of protein is an antigen
|
Flagellar H protein
|
|
spiral cells that move by means of an axial filament are called
|
spirochetes
|
|
what is the main difference between axial filaments and flagella
|
axial filaments wrap round the cell
|
|
what helps the cells adhere to surfaces
|
fimbriae
|
|
what is simple diffusion
|
movement of molecules or ions from an area of high concentration to an area of low concentration
|
|
what is facilitated diffusion
|
proteins function as channels or carriers that facilitate the movement of ions or large molecules across the plasma membrane
|
|
osmosis
|
movement of solvent molecules across a selectively permeable membrane from an area with a high concentration of solvent molecules to an area of low concentration solvent molecules
|
|
osmotic pressure
|
the pressure required to prevent the movement of pure water into a solution containing some solutes
|
|
isotonic solution
|
a medium in which the overall concentration of solutes equals that found inside the cell
|
|
hypotonic sol
|
concentration of solutes is lower than that inside the cell
|
|
what can happen if the cell wall is weak and it takes in water?
|
it can burst or indergo osmoticlysis
|
|
what is a hypertonic sol
|
when its higher concentration outside the cell than inside
|
|
what do the terms isotonic, hyper and hypotonic describe
|
the concentration of solutions outside the cell relative to the concentration inside the cell
|
|
active transport
|
the uses of energy in the form of ATP to move substances across the plasma membrane
|
|
once a substance is altered and inside the cell what happens to the plasma membrane
|
it becomes impermeable to it
|
|
what is the cytoplasm
|
substance in side the plasma membrane of prokaryotic cel
|
|
nucleoid
|
contains a single long, continuous and frequently circularly arranged thread of double stranded DNA
|
|
plasmids are
|
circular extrachromosomal double-stranded DNA molecules
|
|
plasmids may be gained or lost without
|
hurting the cell
|
|
what does the cytoplasm consist of
|
mostly water, organic and inorganic molecules, DNA ribosomes and inclusion
|
|
the cytoplasm of prokaryotic cells contain numerous
|
70s ribosomes (rRNA and protein)
|
|
where does protein synthesis occur
|
at ribosomes
|
|
how can ribosomes be inhibited
|
by certain antibiotics
|
|
what are inclusions
|
reserve deposits in prokaryotic and eukaryotic cells
|
|
what are endospores
|
resting places for some bacteria
|
|
what is the shape of flagella and where are they found
|
they are few and long found in eukaryotic celsl
|
|
describe cilia
|
they are numerous and short
|
|
flagella and cilia are used for
|
motility
|
|
cilia move
|
substances along the surface of cells
|
|
what is the arrangement of flagella and cilia
|
nine pairs and two single microtubules
|
|
what does the cell walls of many algae and fungi contain
|
cellulose
|
|
what is the main material of fungal cell walls
|
chitin
|
|
what are animal cells surrounded by
|
glycocalyx
|
|
what does glcocalyx do
|
strengthen the cell and provide means of attachment to other cells
|
|
the eukaryotic plasma membrane is a
|
phospholipid bilayer containing proteins
|
|
how can eukaryotic cells move materials across the plasma membrane
|
by the passive processes used by prokaryotes and by active transport and endocytosis
|
|
the cytoplasm of eukaryotic cells includes
|
everything inside the plasma membrane external to the nucleus
|
|
the 80s ribosomes found in eukaryotic cells are attached to
|
rough endoplasmic reticulum
|
|
what is the most characteristic eukaryotic organelle
|
the nucleus which contains DNA in the form of chromosomes
|
|
what is the endoplasmic reticulum
|
what the nuclear envelope is connected to in the cytoplasm
|
|
the ER provides
|
surface of chemical reactions and serves as a transport network
|
|
what occurs on the rough ER
|
protein synthesis and transport
|
|
what is the function of the Golgi complex
|
to help with membrane formation and protein secretion
|
|
how are lysosomes formed
|
from Golgi complexes
|
|
what do lysosomes store
|
digestive enzymes
|
|
what is the primary site of ATP production
|
mitochondria
|
|
what does the mitrochondria contain
|
70S ribosomes and DNA
|
|
what do chloroplast contain
|
chlorophyll and enzymes for photosynthesis
|
|
what is the endosymbotic therory
|
the belief that eukaryotic cells evolved from symbiotic prokaryotes living inside other prokaryotic cells
|
|
this is an example of
|
//dp11i9uvzjqmt.cloudfront.net/2/images/upload-flashcards/57/50/90/2575090_m.jpg Diplococci
|
|
this is an example of
|
//dp11i9uvzjqmt.cloudfront.net/2/images/upload-flashcards/57/51/74/2575174_m.jpg coccobacillus bacteria
|
|
this is an example of
|
//dp11i9uvzjqmt.cloudfront.net/2/images/upload-flashcards/57/51/77/2575177_m.jpg diplobacilli bacteria
|
|
this is an example of
|
//dp11i9uvzjqmt.cloudfront.net/2/images/upload-flashcards/57/51/80/2575180_m.jpg sarcinae bacteria
|
|
This is an example of
|
//dp11i9uvzjqmt.cloudfront.net/2/images/upload-flashcards/59/01/68/2590168_m.jpg staphylococci bacteria
|
|
This is an example of
|
//dp11i9uvzjqmt.cloudfront.net/2/images/upload-flashcards/59/01/71/2590171_m.jpg single bacillus bacteria
|
|
This is an example of
|
//dp11i9uvzjqmt.cloudfront.net/2/images/upload-flashcards/59/01/77/2590177_m.jpg diplobacilli bacteria
|
|
This is an example of
|
//dp11i9uvzjqmt.cloudfront.net/2/images/upload-flashcards/59/01/83/2590183_m.jpg streptobacilli bacteria
|
|
This is an example of
|
//dp11i9uvzjqmt.cloudfront.net/2/images/upload-flashcards/59/01/86/2590186_m.jpg coccibacillus bacteria
|
|
cytoplasm refers to
|
the substance inside the cell
|
|
what are the major structures in the cytoplasm of prokaryotes
|
a nucleoid (containing DNA), ribosomes, and reserve deposits called inclusions
|
|
what does the cytoplasm of prokaryotic cells lack
|
cytoskeleton and cytoplasmic streaming
|
|
the nucleoid of a bacterial cell is attached to what
|
the plasma membrane
|
|
what is a plasmid and where is it located
|
plasmid is small circular double stranded DNA molecules. Located in the nucleoid
|
|
why are plasmids important
|
because they may carry genes for such activities as antibiotic resistance, tolerance to toxic metals, the production of toxins and the synthesis of enzymes
|
|
ribosomes are found in
|
both eukaryotic and prokaryotic cells
|
|
ribosomes function as
|
the site of protein synthesis
|
|
the letter S in ribosomes refers to
|
Svedberg units, which indicate the relative rate of sedimentation during ultra high speed centrifugation
|
|
what is an organelle
|
structures with specific shapes and specialized functions and are characteristic of eukaryotic cells
|
|
what does a organelle include
|
nucleus, endoplasmic reticulum, Golgi complex, lysosomes, vacuoles, mitochondria, chloroplasts, peroxisomes and centrosomes
|
|
what contains almost all of the cells hereditary info
|
nucleus
|
|
what is the nucleus surround by
|
a double membrane called the nuclear envelope
|
|
what do nuclear pores allow
|
the nucleus to communicate with the cytoplasm
|
|
what controls the movement of substances between the nucleus and cytoplasm
|
nuclear pores
|
|
what is nucleoli aka nucleolus
|
nucleoli are condensed regions of chromosomes where ribosomal RNA is being synthesized
|
|
what is an essential component of ribosomes
|
ribosomal RNA
|
|
the nucleus of eukaryotic cells contains what main protein
|
histones
|
|
chromatin is
|
threadlike mass of DNA
|
|
when do chromatin turn into chromosomes
|
during nuclear division
|
|
to segregate chromosomes prior to cell division what elaborate mechanisms are required in eukaryotic cells
|
mitosis and meiosis
|
|
what is in the cytoplasm of eukaryotic cells
|
endoplasmic reticulum or ER
|
|
what is the function of smooth ER
|
to sythesisize phosopholipids, fats and steroids
|
|
where is the first place that proteins go after they are synthesized?
|
Golgi complex
|
|
what does the Golgi complex consist of
|
3 to 20 cisternae. give Golgi cuplike shape
|
|
what is a transport vesicle
|
ribosomes of the rough ER that fuse with a portion of the ER membrane
|
|
how do the proteins move from one cistern to another
|
by transfer vesicles
|
|
when enzymes in the cisternae modify proteins, what do they form
|
glycoproteins, glycolipids and lipoproteins
|
|
how do proteins leave the cistern
|
by secretory vesicles or storage vesicles like (lysosomes)
|
|
what are lysosomes formed from
|
Golgi complexes
|
|
what do lysosomes contain
|
40 different kinds of powerful digestive enzymes
|
|
what is a vacuole
|
a space or cavity in the cytoplasm of a cell
|
|
what doe some vacuoles serve as
|
a temporary storage organelle for substances such as proteins, sugars, organic acids and inorganic ions
|
|
other vacuoles from endocytosis
|
help bring food into the cell
|
|
mitochondria
|
spherical or rod shaped organelle that appear throughout the cytoplasm of most eukaryotic cells
|
|
the mitochondria consist of
|
a double membrane, cristae (inner, series of folds), matrix (center of mitochondria
|
|
chloroplasts
|
membrane enclosed structure that contains both the pigment chlorophyll and enzymes required for light-gathering phases of photosynthesis
|
|
where is the chlorophyll in chloroplasts contained
|
in thylakoids(flattened membrane sacs)
|
|
what do chloroplasts contain
|
70S ribosomes, DNA and enzymes
|
|
perioxisomes
|
similar to the structure of lysosomes, but smaller
|
|
what happens in peroxisome
|
AA and fatty acids are oxidized
|
|
what do the enzymes in peroxisomes do such as the enzyme catalase
|
oxidize toxic substance such as alcohol. Or decompose toxic compounds like carbon dioxide
|
|
what is the centrosome
|
located in the nucleus contains: pericentriolar area and centrioles
|
|
within the pericentriolar material is a pair of cylindrical structure called
|
centriole
|
|
what is the endosymbiotic theory
|
explains the origin of eukaryotes from prokaryotes. That larger bacterial cells lost their cells walls and engulfed smaller bacterial cells
|
|
biosynthetic-secretory pathway
|
The process used by eucaryotic cells to synthesize proteins and lipids, followed by secretion or delivery to organelles or the plasma membrane; involves the endoplasmic reticulum, Golgi apparatus, and secretory vesicles.
|
|
cilia
|
Threadlike appendages extending from the surface of someprotists that beat rhythmically to propel them; cilia are membrane-bound cylinders with a complex internal array of microtubules, usually 9+2 pattern.
|
|
cristae
|
infoldings of the inner mitochondrial membrane
|
|
cytoskeleton
|
A network of microfilaments, microtubules, intermediate filaments, and other components in the cytoplasm of eucaryotic cells that helps give them shape, functions during cell division, and helps move materials in the cytoplasm.
|
|
endocytosis
|
The process in which a cell takes up solutes or particles by enclosing them in vesicles pinched off from its plasma membrane
|
|
endoplasmic reticulum (ER)
|
A system of membranous tubules and flattened sacs (cisternae) in the cytoplasm of eucaryotic cells; rough endoplasmic reticulum (RER) bears ribosomes on its surface; smooth endoplasmic reticulum (SER) lacks ribosomes
|
|
Flagellum
|
A thin, threadlike appendage on many procaryotic and eucaryotic cells that is responsible for their motility.
|
|
Golgo apparatus
|
A membranous eucaryotic organelle composed of stacks of flattened sacs (cisternae), which is involved in packaging and modifying materials for secretion and many other processes.
|
|
Lysosome
|
A spherical membranous eucaryotic organelle that contains hydrolytic enzymes and is responsible for the intracellular digestion of substances.
|
|
Microfilaments
|
Protein filaments, about 4 to 7 nm in diameter, that are present in the cytoplasm of eucaryotic cells and play a role in cell structure and motion.
|
|
Mitochondrion
|
The eucaryotic organelle that is the site of cellular respiration; it provides most of a nonphotosynthetic cell's energy under aerobic conditions.
|
|
Nuclear envelope
|
The complex double-membrane structure forming the outer boundary of the nucleus.
|
|
Nucleolus
|
Anorganelle located within the nucleus and not bounded by a membrane; it is the location of fibosomal RNA synthesis and assembly of ribosomal subunits.
|
|
Nucleus
|
The eucaryotic organelle enclosed by a double-membrane envelope that contains the cell's chromosomes.
|
|
Organelle
|
A structure within or on a cell that performs specific functions and is related to the cell in a way similar to that of an organ to the body.
|
|
Phagocytosis
|
The endocytotic process in which a cell encloses large particles in a membrane-delimited phagocytic vacuole (phagosome) and engulfs them.
|
|
Thylakoid
|
A flattened sac in the chloroplast stroma that contains photosynthetic pigments and the proteins and other molecules that convert light energy into ATP
|
|
Optimum temperature between -5 and 15 C.
|
Psychrophile
|
|
Optimum temperature between 20-30 C.
|
Psychrotroph
|
|
Optimum temperature between 25-45 C.
|
Mesophile
|
|
Optimum temperature between 45-70 C.
|
Thermophile
|
|
Optimum temperature of 70 C or greater.
|
Hyperthermophile
|
|
Requires O2
|
Obligate Aerobe
|
|
Cannot multiply in the presence of O2
|
Obligate Anaerobe
|
|
Grows best if O2 is present but can grow without it.
|
Facultative Anaerobe
|
|
Requires small amounts of O2 but higher concentrations are inhibitory.
|
Microaeophile
|
|
Indifferent to O2
|
Aerotolerant Anaerobe (Obligate Fermenter)
|
|
Multiplies at range of pH 5-8
|
Neutrophile
|
|
Multiplies at pH below 5.5
|
Acidophile
|
|
Multiplies at pH above 8.5
|
Alkalophile
|
|
Can grow in relatively high salt concentrations up to 10% NaCl
|
Halotolerant
|
|
Requires high levels of sodium chloride
|
Halophile
|
|
Bacteria can be maintained in a state of continuous exponential growth using a ____.
|
Chemostat
|
|
Temperature at which an organism multiplies most rapidly
|
Optimum growth temperature
|
|
Usually found in environments such as the Arctic and Antarctic regions and in lakes fed by glaciers
|
Psychrophiles
|
|
These are an important cause of food spoilage
|
Psychotrophs
|
|
These include disease causing bacteria
|
Mesophiles
|
|
Commonly occur in hot springs, water heaters and compost heaps
|
Thermophiles
|
|
These are usually Archae. Some have been found in deap sea hydrothermal vents
|
Hyperthermophiles
|
|
The O2 requirements of some organisms can be determined by making a ____.
|
Shake Tube
|
|
Micrococcus species are ___.
|
Obligate Aerobes
|
|
Include Clostridium botulinum and members of the Genus Bacteroides (major inhabitants of the large intestines).
|
Obligate Anaerobes
|
|
E. coli is a ____.
|
Facultative Anaerobe
|
|
Helicobacter pylori is a ____.
|
Microaerophile
|
|
Streptococcus pyogenes is a ____.
|
Aerotolerant Anaerobe
|
|
Superoxide
|
O2-
|
|
Hydrogen Peroxide
|
H2O2
|
|
Superoxide Dismutase degrades ____ to produce ____.
|
Superoxide, Hydrogen Peroxide
|
|
Catalase breaks down ____ to ____ and ____.
|
Hydrogen peroxide to O2 and H2O.
|
|
When the cytoplasm dehydrates and shrinks from the cell wall, this is called ____.
|
Plasmolysis
|
|
The major elements include
|
Hydrogen, Oxygen, Carbon, Nitrogen, Sulfur, Magnesium, Phosphorus, Potassium, Calcium, Iron,
|
|
Prokaryotes that use organic carbon (such as glucose) are called ____.
|
Heterotrophs
|
|
Prokaryotes that use inorganic carbon (CO2) are called ____.
|
Autotrophs
|
|
____ can convert inorganic carbon to organic carbon (carbon fixation).
|
Autotrophs
|
|
Some prokaryotes can perform nitrogen fixation, where ____ is converted to ____.
|
N2, ammonia
|
|
____ and ____ are limiting nutrients.
|
Phosphorus and Iron
|
|
Trace Elements include:
|
Manganese, Molybdenum, Cobalt, Zinc, and Copper.
|
|
Bacteria that require many growth factors are called ____.
|
Fastidious
|
|
Low molecular weight compounds that are required by a particular bacterium are called ____.
|
Growth Factors
|
|
Organisms that harvest the energy of the sunlight
|
Phototrophs
|
|
Organisms that obtain energy by oxidizing chemical compounds
|
Chemotrophs
|
|
Use the energy of the sunlight and CO2 in the atmosphere to make organic compounds.
|
Photoautotrophs
|
|
Photoautotrophs are also called ____.
|
Primary Producers
|
|
Cyanobacteria are ____.
|
Photoautotrophs
|
|
These use CO2 as their carbon source and inorganic compounds for energy. They often live in inhospitable climates.
|
Chemolithotrophs/Chemoautotrophs
|
|
Use the energy of the sunlight to derive their carbon from organic compounds
|
Photoheterotrophs
|
|
Use organic compounds for energy and as a carbon source.
|
Chemoheterotroph/Chemoorganoheterotroph
|
|
Mixture of short peptides and amino acids, made from digesting protein. Common ingredient of medium.
|
Peptone
|
|
Nutrient Broth consists of ____ and ____.
|
Peptone and Beef Extract
|
|
Media that contains red blood cells.
|
Blood Agar
|
|
Contains lysed red blood cells and other ingredients
|
Chocolate Agar
|
|
Composed of precise amounts of pure chemicals
|
Chemically Defined Media
|
|
Inhibit the growth of organisms other than the one which is being sought.
|
Selective Media
|
|
____ is used to isolate Neisseria gonorrhoeae.
|
Thayer-martin Agar
|
|
____ is used to isolate Gram-Negative Rods from clinical specimens such as urine.
|
MacConkey Agar
|
|
Contain a substance that certain bacteria change in a recognizable way.
|
Differential Media
|
|
Provide conditions in a broth that preferentially enhance the growth of one particular species in a cuture. Useful for isolating a specimen that is outnumbered greatly by another in the mixture
|
Enrichment Culure
|
|
The number of cells in a measured volume of liquid is counted using special glass slides.
|
Direct Microscopic Count
|
|
Electronic Instrument that counts cells in a suspension as they pass single file through a minute aperture.
|
Coulter Counter
|
|
Measures the scattering of light cells as they pass by a laser. Can be used to count either total cells or a specific popluation.
|
Flow Cytometer
|
|
Used to quantify the number of cells capable of multiplying.
|
Viable Cell Counts
|
|
Measure the number of viable cells in a sample by exploiting the fact that on an agar plate, one cell gives rise to one colony
|
Plate Count
|
|
A dilution is poured into a petri dish, spread, and then swirled. When the agar hardens, the individual cells are fixed in place, and the colonies can be counted.
|
Pour Plate Method
|
|
A dilute sample is spread over a plate and incubated.
|
Spread Plate Method
|
|
Method used when the number of organisms in a sample is relatively low, such as in pond water.
|
Membrane Filtration
|
|
Method of determining cells based on serial dilutions
|
MPN (Most Probable Number) Method
|
|
A ____ is used to measure turbidity.
|
Spectrophotometer
|
|
Cloudiness
|
Turbidity
|
|
Caused by the scattering of light passing through cells in a sample.
|
Turbidity
|
|
The equation used to calculate the total number of cells which will grow in a given amount of time is:
|
Nt=N0 x 2^n, where n is the number of divisions, N0 is the original number of cells and Nt is the total number of cells produced in that time.
|
|
Increase of number of cells in a population
|
Microbial Growth
|
|
The Generation time is:
|
The amount of time it takes for the number of cells to double.
|
|
Prokaryote comes from the Greek words meaning...
|
Prenucleus
|
|
Eukaryote comes from the Greek words meaning...
|
True nucleus
|
|
Name some distinguishing traits for prokaryotes.
|
There are 6 main ones listed in the chapter: One circular chromosome, not in a membrane, no histones, no organelles, peptidoglycan cell walls if bacteria, pseudomurein cell walls if Archaea, and binary fission
|
|
Name some distinguishing traits for eukaryotes.
|
There are 5 listed in the chapter, they are: paired chromosomes in nuclear membrane, histones, organelles, polysaccharide cell walls, and a mitotic spindle.
|
|
What is the main feature that distinguishes prokaryotes from eukaryotes?
|
The nucleus.
|
|
What are the three basic types of bacteria?
|
Baccillus (rod-shaped), Coccus (spherical), and Spiral (spirillum, vibro, spirochete).
|
|
What are the arrangements of bacteria?
|
Pairs: Diplo- Ex. Diplococci
Clusters: Staph- Ex. Staphylococci Chains: Strept- Ex. Streptococci |
|
How would you identify streptococci under a microscope?
|
They would be circular shaped bacteria in a chain.
|
|
Describe the structure and function of glycocalyx.
|
An outside cell wall, usually sticky. If referred to as a capsule it is neatly organized. If referred to as a slime layer it is unorganized and loose.
|
|
What is EPS?
|
Extracellular polysaccharide, a substance that allows a cell to attach to environment.
|
|
What do capsules prevent?
|
Phagocytosis.
|
|
What is a flagella?
|
A flagella is a long tail like structure made up of chains of flagellin, attached to a protein hook, anchored to the wall and membrane by the basal body, and can be in different positions.
|
|
How do cells with flagella move?
|
Rotate the flagella to run, swim or tumble. Also can swarm if there are many flagella. They move toward or away stimuli called taxis which can be phototaxis or chemotaxis.
|
|
What are axial filaments?
|
Also called endoflagella, are in spirochetes, anchored at one end of a cell, are structurally similar to flagellum, and rotate to cause cell movement.
|
|
What are fimbriae?
|
The are hair like appendages, allow attachment, adherence and biofilm.
|
|
What are pili?
|
They facilitate transfer of DNA from one cell to another, have gliding and twitching motility, and number one or two per cell.
|
|
Why are bacterial capsules medically important?
|
They are usually more chemically resistant and therefore can be harder to kill using antibiotics.
|
|
How do bacteria move?
|
They move using flagella, fimbriae, and pili.
|
|
What is the cell wall made up of in bacteria?
|
Peptidoglycan.
|
|
What is peptidoglycan?
|
A polymer of disaccharide: N-acetylglucosamine (NAG) and N-acetylmuramic acid (NAM).
|
|
What are some details about a gram positive bacteria's cell wall?
|
Thick peptidoglycan, teichoic acids, may regulate movement of cations, polysaccharides provide antigenic variation, 2-ring basal body, disrupted by lysozme, and is penicillin sensitive.
|
|
What are some details about a gram negative bacteria's cell wall?
|
Thin peptidoglycan, outer membrane, periplasmic space, 4-ring basal body, endotoxin, and tetracycline sensative
|
|
What are some details about acid-fast bacteria's cell walls?
|
They are like gram positive, waxy lipi (mycolic acid) is bound to peptidoglycan.
|
|
What are some details about mycoplasma's cell walls?
|
They lack cell walls! They have sterols in plasma membrane.
|
|
What are some details about archaea cell walls?
|
No cell walls, or walls of pseudomurein which lack NAM and D-amino acids.
|
|
What does lysozyme do to a cell wall?
|
Lysozyme digests disaccharide in peptidogylcan
|
|
What is a protoplast?
|
A wall-less cell.
|
|
What is a spheroplast?
|
A wall-less gram-positive cell.
|
|
What are protoplasts and spheroplasts susceptible to?
|
Osmotic lysis.
|
|
What are L forms?
|
Wall-less cells that swell into irregular shapes.
|
|
Why are drugs that target cell wall synthesis useful?
|
They are useful because animal cells do not contain cell walls and therefore won't be damaged by the cell-wall destroying drug.
|
|
Why are mycoplasmas resistant to antibiotics that interfere with cell wall synthesis?
|
They have no cell walls.
|
|
How do protoplasts differ from L forms?
|
L forms swell into irregular shapes while protoplasts just don't have a cell wall.
|
|
What is the structural components of the prokaryotic plasma membrane?
|
Phospholipid bilayer, peripheral proteins, integral proteins, transmembrane, and proteins.
|
|
What are the chemical components of the prokaryotic plasma membrane?
|
It is selectively permeable, there are enzymes for ATP production, and there are photosynthetic pigments on folding called chromatophores or thylakoids.
|
|
What are the functions of the prokaryotic plasma membrane?
|
Simple and facilitated diffusion, osmosis, active transportation and group translocation.
|
|
What is simple diffusion?
|
Movement of a solute from high concentration to low concentration.
|
|
What is facilitated diffusion?
|
When solute combines with a transporter protein in the membrane.
|
|
What is osmosis?
|
Osmosis if the movement of water across a selectively permeable membrane from an are of high concentration to an area of low concentration.
|
|
What is osmotic pressure?
|
The pressure needed to stop the movement of water across the membrane.
|
|
How does water move across membranes?
|
They move across either by going directly through the lipid layer or through an aquaporin.
|
|
What is active transport?
|
Movement across a membrane that required a transporter protein and ATP
|
|
What is group translocation?
|
Movement across a membrane that requites a transporter protein and PEP.
|
|
What agents can cause injury to the bacterial plasma membrane?
|
Antimicrobial agents called polymyxins cause leakage of intracellular contents and subsequent cell death, also alcohols and quaternary ammonium compounds are harmful to the bacterial plasma membrane.
|
|
What is cytoplasm?
|
The substance inside the plasma membrane.
|
|
What is the nucleoid?
|
The nucleoid is the bacterial chromosome.
|
|
The prokaryotic ribosome is.....
|
used for protein synthesis and is 70s (containing 50s and 30s subunits)
|
|
What are endospores?
|
They are resting cells, are resistant to desiccation, heat and chemicals. Bacillus and Clostridium are two genera with endospores
|
|
What are the functions of inclusions?
|
Metachromatic granules (volutin) = phosphate reserves.
Polysaccharide granules = energy reserves Lipid inclusions = energy reserves. |
|
What is sporulation?
|
Endospore formation.
|
|
What is germination?
|
A return to vegetative state.
|
|
Where is the DNA located in the eukaryotic cell?
|
The DNA is located in the nucleus.
|
|
What is the difference of prokaryotic and eukaryotic flagella?
|
A prokaryotic flagellum rotates, while a eukaryotic flagellum moves like a wave.
|
|
What is the eukaryotic glycocalyxe?
|
They are carbohydrates extending from animal plasma membrane, and are bonded to proteins and lipids in membranes.
|
|
What is the difference between prokaryotic and eukaryotic cell walls?
|
Eukaryotic cell walls do not contain peptidoglycan, Instead they contain cellulose, chitin, glucan, or mannan.
|
|
What is the difference between the eukaryotic and prokaryotic plasma membrane?
|
They are very similar except eukaryotic plasma membrane also contains sterols. Group translocation does not occur in eukaryotic cells. However, they can use endocytosis.
|
|
What is the difference between the prokaryotic and eukaryotic cytoplasm?
|
The major difference is that eukaryotic cytoplasm contains a complex internal structure, consisting of exceedingly small rods (microfilaments and intermediate filaments) and cylinders (microtubules). Together forming the cytoskeleton.
|
|
What is cytoplasmic streaming?
|
The movement of cytoplasm throughout cells.
|
|
What is the structure and function of the eukaryotic ribosome?
|
It is responsible for protein synthesis, it is 80s in membrane bound (attached to ER) and free in cytoplasm, it is 70s in chloroplasts and mitochondria.
|
|
The antibiotic erythromycin binds with the 50s portion of a ribosome. What effect does that have on a prokaryotic cell? What about a eukaryotic cell?
|
A prokaryotic cell would stop producing proteins completely whilst a eukaryotic cell's mitochondria or chlorloplasts would be the only thing effected.
|
|
Define organelle.
|
Organelles are structure with specific shapes and specialized functions and are characteristic of eukaryotic cells.
|
|
What is function of the nucleus?
|
The nucleus contains DNA in the form of chromosomes.
|
|
What is the Endoplasmic Reticulum?
|
It is the transport network of the cell.
|
|
What is the Golgi complex?
|
It functions as membrane formation and secretion.
|
|
What is the lysosome?
|
Lysosome contains digestive enzymes.
|
|
What is a vacuole?
|
A vacuole brings food into cells and provides support.
|
|
What is the mitochondrion responsible for?
|
Cellular respiration.
|
|
What does the chloroplast do?
|
Photosynthesis.
|
|
What does peroxisome do?
|
Oxidation of fatty acids, destroys H2O2
|
|
What is a centrosome?
|
Consists of protein fibers and centrioles.
|
|
What is the difference between the nucleus of a eukaryotic cell and the nucleoid of a prokaryotic cell?
|
The nucleus in membrane bound and contains chromosomes. The nucleoid is not membrane bound and floats freely.
|
|
How does the rough and smooth ER compare structurally?
|
Structurally, the rough and smooth ER are different in that the rough ER is studded with ribosomes and is continuous with the nuclear membrane. The smooth ER extends from the rough ER to form a network of membrane tubules.
|
|
How does the rough and smooth ER compare functionally?
|
Proteins are synthesized on the rough ER enter cisterns within the ER for processing and sorting. The smooth ER does not synthesize proteins but it does synthesize phospholipids, fats, and steroids such as estrogens and testosterone.
|
|
Which three organelles are not associated with the Golgi complex? What does this suggest about their orgin?
|
The nucleolus, mitochondria, and the centrioles are all not associated with the golgi complex. It is theorized in the endosymbiotic theory that these were ancient bacteria that were engulfed by another ancient cell.
|
|
Name the 4 shapes of Cell mophology?
|
Cocci:- Round or spheres
Bacillus:- Rods Spirillum:- Spiral/wavy Spirochele:- Corkscrew |
|
The shape of cell morphology is maintained by what?
|
Peptidoglycan cell wall
|
|
Cell is covered by what?
|
Cell or plasma membrane
Cell wall |
|
What is cell wall composed of?
|
Peptidoglycan
Outer membrane in some bacteria |
|
Name the stuctures inside the cell covering?
|
Cytoplasm, Ribosomes, Nucleoid region, Plasmid, Mesosomes, Cesicle or inclusions.
|
|
What is the functions of ribosome?
|
IT is the site for protein synthesis.
|
|
What are the 70s ribosomes composed of?
|
30s and 50s subunits.
|
|
What does the "S" in "30s,50s,70s ribosomes" stand for?
|
The "S" stands for sedimentation coefficient or Svediberg Unit.
|
|
What is the functions of Nucleoid regions?
|
It is the area containing the bacteria chromosome.
|
|
What is bacteria chromosome?
|
IT is a circular DNA containing most genes for the bacteria structure and function.
|
|
What is Plasmid?
|
It is a small circular extrachromosomal DNA capable of independent replications & carries gene for resistance & or fertility.
|
|
What are the 2 types of Plasmid?
|
R-plasmid/ F-Plasmid
|
|
What is the funtions of R-plasmid?
|
It carries gene for resistance against chemicals & drugs.
|
|
What are the functions of F-plasmid?
|
It contain genes that enhance fertility & gen transfer in conjugation or suxductions. (passing information from one DNA to another.
|
|
What does F-Plasmid encode?
|
Pili:-a bridge used to transfer DNA from F+ to F-.
|
|
Macroelements
|
macronutrients required by microorganisms in relatively large amounts (95%) (C, H, O, N, S, P, K, Ca, Mg, Fe)
|
|
Trace elements
|
micronutrients are required in trace amounts by most cells (supplied in water) (Mn, Zn, Co, Mo, Ni, Cu)
|
|
Carbon Source: Autotrophs
|
Autotrophs use CO2 as their sole or principal carbon source
|
|
Carbon Source: Heterotrophs
|
Heterotrophs use reduced, preformed organic molecules (usually from other organisms) as carbon sources
|
|
Energy: Photo-trophs
|
Photo-trophs use light as their energy source.
|
|
Energy: Chemo-trophs
|
Chemo-trophs obtain energy from the oxidation of organic or inorganic compounds (Chemo-Organo-trophs or Chemo-Lithot-trophs)
|
|
Electrons: Litho-trophs
|
Litho-trophs use reduced inorganic compounds as their electron source
|
|
Electrons: Organo-trophs
|
Organo-trophs use reduced organic compounds as their electron source
|
|
All pathogenic bacteria are
|
Chemo organo trophic heterotrophs
|
|
Organisms that combine autotrophic and heterotrophic metabolic processes, from on inorganic energy sources and organic carbon sources
|
mixotrophic organisms
|
|
Nitrogen is needed for
|
- synthesis of amino acids, purines, pyrimidines and other molecules
|
|
How Nitrogen can be supply (3)?
|
1. by organic molecules 2. by assimilatory nitrate reduction 3. or by nitrogen fixation
|
|
Where Phosphorus is present ?
|
Phosphorus is present in nucleic acids, phospholipids, nucleotides and other molecules;
|
|
How microorganism meet their Phosphorus needs?
|
using inorganic phosphate
|
|
Where Sulfur is needed?
|
Sulfur is needed for the synthesis of certain amino acids and other molecules;
|
|
How microorganism meet their sulfur needs?
|
by assimilatory sulfate reduction
|
|
Explain Passive diffusion (3 ideas)
|
1.Molecules move from high_conc to low_conc 2. Large conc. gradient for signif. levels of uptake 3.Limited to only a small molecules (glycerol, H2O, O2, and CO2)
|
|
Facilitated diffusion
|
involves a carrier molecule (permease) to increase rate diffusion, facilitated by integral proteins, from high_conc to low_conc, but smaller gradient.
|
|
What limited the transport in Facilitated diffusion?
|
the number of carrier proteins-> Saturated Effect
|
|
Facilitated diffusion is important in: Eucaryotes cells or Procaryotes celss
|
Eucaryotes cells
|
|
Active transport
|
Metabolic energy is used to move molecules to cell interior against the concentration gradient. Observed in bacteria, archaea and eucaryotes.
|
|
Group translocation
|
A process in which molecules are modified (chemically altered) as they are transported across the membrane.
|
|
Example of Group translocation
|
phosphoenolpyruvate: sugar phosphotransferase system (PTS).
|
|
Why iron?
|
iron is useful in cytochromes and many enzymes
|
|
Iron uptake
|
the organism secretes Siderophores that complex with the very insoluble ferric ion (Fe3+), which is then transported into the cell
|
|
Fe3+, soluble or not?
|
It is Insoluble, so small amounts of iron are available. Bacteria and fungi handle this problem by the development of siderophores able to complex with ferric
|
|
Culture Media
|
Solid or liquid preparation used to grow, transport, and store microorganisms
|
|
Culture Media: Synthetic media
|
defined media in which all components and their concentrations are known
|
|
Culture Media: Complex media
|
media that contain some ingredients of unknown composition and/or concentration (amino acids, vitamins, growth factors, and other nutrients)
|
|
General purpose media
|
It will support the growth of many microorganisms
|
|
Enriched media
|
They are supplemented by blood or other special nutrients to encourage the growth of fastidious heterotrophs
|
|
Selective media
|
It favors the growth of particular microorganisms and inhibit the growth of others
|
|
Differential media
|
Distinguish between different groups of bacteria on the basis of their biological characteristics: Nutrient broth, Tryptic soy broth, Macconkey Agar.
|
|
collective name for chemical reactions occuring within a cell
|
metabolism
|
|
metabolic reaction that requires energy
|
anabolic reaction
|
|
metabolic reaction that is energy releasing
|
catabolic reaction
|
|
organisms that use organic compounds as their carbon and energy sources
|
chemoorganotrophs
|
|
organisms that obtain carbon and energy from co2
|
autotrophs
|
|
chemical tools needed to make monomers
|
nutrients
|
|
nutrients required in large amounts
|
macronutrients
|
|
nutrients required in small or trace amounts
|
micronutrients
|
|
the typical cell is about ___ % carbon
|
50%
|
|
the major element in all classes of macromolecules
|
carbon
|
|
next most abundant element in the cell after carbon
|
nitrogen
|
|
N2 (nitrogen gas) can only be a source for certain bacteria known as
|
nitrogen-fixing bacteria
|
|
ammonia and nitrate are examples of ____ sources which are in inorganic form
|
nitrogen
|
|
macronutrient required by cell primarily for synthesis of nucleic acids and phospholipids
|
phosphorus
|
|
macronutrient required by cell because of structural role in certain amino acids and present in a number of vitamins
|
sulfur
|
|
macronutrient that originates mostly from inorganic sources such as sulfate or sulfide
|
sulfur
|
|
macronutrient required by cell to make enzymes, some of which are involved in protein synthesis
|
potassium
|
|
macronutrient required by cell in order to stabilize ribosomes, cell membranes, and nucleic acids. also required for activity of many enzymes
|
magnesium
|
|
macronutrient that helps stabilize bacterial cell wall and plays a key role in heat stability of endospores
|
calcium
|
|
required by some but not all organisms. need often reflects habitat of organism
|
sodium
|
|
plays major role in cellular respiration, also a key component of the cytochromes and proteins involved in electron transport
|
iron
|
|
iron-binding agents that solubilize iron and transport it into the cell
|
siderophores
|
|
structurally complex phenolic siderophores
|
enterobactins
|
|
without ___, pathogens would be unable to initiate an infection due to iron limitations
|
siderophores and enterobactins (iron binding agents)
|
|
organic compounds that are required in very small amounts and only by some cells
|
growth factors
|
|
includes vitamins, amino acids, purines, and pyrimidines; most microorganisms are able to synthesize all of these compounds, but some require them preformed from environment
|
growth factors
|
|
most commonly needed growth factors; most funtion as coenzymes
|
vitamins
|
|
nutrient solutions used to grow microorganisms in the laboratory
|
culture media
|
|
culture media where exact contents are known
|
defined media
|
|
culture media where exact contents are unknown (rotting meat/yeast could be used)
|
undefined (complex media)
|
|
a culture containing only a single kind of microorganism
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pure culture
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unwanted organisms within a culture
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contaminants
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the ability to do work; measured in units of kilojoules (kJ)
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energy
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energy released that is available to do useful work
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free energy
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pH 7, 25 degrees C, all reactants and products @ 1 M initial concentration
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standard conditions
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when G is negative, reaction proceeds w/ ___ of free energy; such reactions are ___
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release; exergonic
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when G is positive, the reaction ____ energy; such reactions are ____
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require; endergonic
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amount of energy required to bring all molecules in a chemical reaction to the reactive state
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activation energy
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substance that lowers activation energy
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catalyst
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catalysts of biological reactions are proteins called
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enzymes
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in an enzyme-catalyzed reaction, the enzyme temporarily combines w/ the reactant which is termed a ___; this forms a _______
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substrate; enzyme-substrate complex
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the enzyme is generally much ____ than the substrate
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larger
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small portion of enzyme to which substrates bind
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active site
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Active Transport
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The transport of solute molecules across a membrane against an electrochemical gradient; it requires a carrier protein and the input of energy (ATP)
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Agar
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A complex sulfated polysaccharide, usually from red algae, that is used as a solidifying agent in the preparation of a culture media
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Antiport
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Linked transport in which the transported substances move in oppostie directions
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Growth Factors
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Organic compounds that must be supplied in the diet for growth because they are essential cell components or precursors of such components and can't be synthesized
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Autotrophs
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An organism that uses CO2 as its sole or principal source of carbon
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Heterotrophs
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An organism that uses reduced, preformed organic molecules as its principal carbon
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Chemolithotrophic Autotrophs (Chemolithoautotrophs)
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Microorganisms that oxidized reduced inorganic compounds to derive both energy and electrons; CO2 is their carbon source
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Chemoorganotrophic heterotrophs (Chemoheterotrophs)
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Organisms that use organic compounds as sources of energy, hydrogen, electrons, and carbon for biosynthesis
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Chemotrophs
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Organisms that obtain energy from the oxidation of chemical compounds
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Colony
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An assemblage of microorganisms growing on a solid surface such as the surface of an agar culture medium; the assmeblage often is directly visible, but also may be seen only microscopically
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Complex Medium
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Culture medium that contains some ingredients of unknown chemical composition
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Defined Medium (Synthetic Medium)
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Culture medium made with components of known composition
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Differential Media
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Culture media that distinguish between groups of microorganims based on differences in their growth and metabolic products
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Facilitated Diffusion
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Diffusion across the plasma membrane that is aided by a carrier
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Group Translocation
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A transport process in which a molecule is moved across a membrane by carrier proteins while being chemically altered at the same time
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Lithotroph
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An organism that uses reduced inorganic compounds as its electron source
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Macroelements
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Nutrients required by microorganisms in relatively large amounts (C, O, H, N, S, and P)
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Micronutrients
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Nutrients such as zinc, manganese, and copper that are required in very small quantities for growth and reproduction (AKA: Trace Elements)
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Mixotrophic
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Refers to microorganisms that combine autotrophic and heterotrophic metabolic processes (they use inorganic electron sources and organic carbon sources)
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Nutrient
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A substance that supports growth and reproduction
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Organotrophs
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Organisms that use reduced organic compounds as their electron source
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Passive Diffusion
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The prosses in which molecules move from a region of higher concentration to one of lower concentration as a result of random thermal agitation
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Peptones
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Water-soluble digests or hydrolysates of proteins that are used in the preparation of culture media
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Permease
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A membrane-bound carrier protein or a system of two or more proteins that transport a substance across the membrane
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Pour Plate
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A petri dish of solid culture medium with isolated microbial colonies growing both on its surface and within the medium
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Phophoenolpyruvate: Sugar Phosphotransferase system (PTS)
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The best-known group translocation system; it transports a variety of sugars into procaryotic cells while phosphorylating them using PEP as the phosphate donor
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Pure Culture
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A population of cells that are idenitical because they arise from a single cell
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Photolithotrophic Autotrophs (Photoautotrophs)
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Organisms that uses light energy, an inorganic electron source (eg. H2O, H2, H2S), and CO2 as a carbon source
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Photoorganotrophic Hetertrophs
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Microorganisms that use light energy and organic electron donors, and also employ simple organic molecules rather than CO2 as their carbon source
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Phototrophs
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Organisms that use light as their energy source
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Selective Media
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Culture media that favor the growth of specific microorganisms; this may be accomplished by inhibiting the growth of undesired microorganisms
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Siderophores
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A small molecule that complexes with ferric iron and supplies it to a cell by aiding in its transport across the plasma membrane
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Symport
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Linked transport of two substances in which they both go in the same direction
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Vitamin
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An organic compound required by organisms in minute quantities for growth and reproduction becasue it cannot be synthesized by the organism; vitamins often serve as enzyme cofactors or parts of cofactors
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Lag phase
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(apparent inactivity) the population remains at the same number. Metabolic activity is taking place, synthesizing new cell components. Length depends of conditions.
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Log phase
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(Exponential) bacterial growth occurs at its optimal level (maximal rate possible) and population doubles rapidly. Population is most uniform in terms of chemical and physical properties.
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Stationary phase
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Number of viable microorganisms remains constant, the reproduction of bacterial cells is offset by their death, – and the population reaches a plateau.
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Death phase
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the bacteria die off rapidly (exponential rate)
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Mean growth rate constant
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K: number of generations per unit time, often expressed as generations per hour
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Starvation proteins are produced by a culture during which phase of the growth curve?
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Stationary phase
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aerotolerant anaerobe
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uses oxygen when present or grows without oxygen when absent. Psychrotrophs (facultative psychrophiles)
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System that is used to grow bacterial cultures continuously
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Chemostat
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They can grow well at 0°C, have optimal growth at 15°C or lower, and usually will not grow above 20°C
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Psychrophiles
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They can also grow at 0°C, but have growth optima between 20°C and 30°C, and growth maxima at about 35°C
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Psychrotrophs (facultative psychrophiles)
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They have growth optima of 20 to 45°C, minima of 15 to 20°C, and maxima of about 45°C or lower
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Mesophiles
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They have growth optima of 55 to 65°C, and minima around 45°C
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Thermophiles
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They have growth optima of 80 to 110°C and minima around 55°C
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Hyperthermophiles
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An organism able to grow in the presence of O2 is an
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aerobe
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An organism that cannot able to grow in the presence of O2 is an
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anaerobe
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An organism that ignore O2 and grow equally well whether it is present or not
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Aerotolerant anaerobes
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Microaerophiles
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An organism that require lower levels (2 to 10%) for growth because normal atmospheric levels of O2 (20%) are damaging to the cell
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Biogeochemical cycles
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Pathway by which a chemical element or molecule moves through: –biotic(biosphere) – abiotic (lithosphere, atmosphere, and hydrosphere)
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Reservoirs
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Place where the element is accumulated or held for a long period of time (such as an ocean or lake for water)
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cyanobacteria
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A large group of bacteria that carry out oxygenic photosynthesis using a system like that present in photosynthetic eucaryotes. (See 471)
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the transformations of a substrate, and the products of one group of microorganisms can be used by a second type of microorganism
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commensalism
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commensalism
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A type of symbiosis in which one individual gains from the association and the other is neither harmed nor benefited
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mineralization
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The release of inorganic nutrients from organic matter during microbial growth and metabolism.
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Nitrogen fixation
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series of sequential reduction steps to convert gaseous nitrogen to ammonia. Needs energy. by aerobes or anaerobes. must be done anaerobically, even by aerobic microorganisms.
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Water borne diseases:
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pathogens originate in fecal material are transmitted by Ingestion
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Water related diseases:
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MO with life cycles associated with insects that live in water, by Insects
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Water based:
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originate in water/spend some life in water and come into direct contact with human by Inhalation
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Water washed diseases:
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originated in feces and transmitted because of inadequate sanitation or hygiene, by Contact
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Antigen
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foreign molecule, when introduced into the body, triggers the production of an antibody by the immune system. Immune system will kill or neutralize the antigen as potentially harmful invader.
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