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53 Cards in this Set

  • Front
  • Back
Ribosomes
complex structures composed of protein and ribonucleic acid. Site of protein syntheses
Cytoplasmic ribosomes
the cytoplasmic matrix is often packed with ribosomes that synthesize proteins destined to stay in the cell
plasma membrane ribosomes
plasma membrane ribosomes make proteins for transport outside the cell
How is the shape of each protein determined?
the shape of each protein is determined by its amino acid sequence.
Molecular chaperones
aid the polypeptide in folding to its proper shape
Svedberg Unit
(S) a measure of sedimentation velocity in an ultracentrifuge. The faster a particle travels when centrifuged, the greater its S value or sedimentation coefficient.
S value or sedimentation coefficient is a function of a particles...
molecular weight, volume, and shape.
*Heavier particles typically have larger S numbers and sediment faster
Eukaryotic cells vs Prokaryotic cells
Eukaryotic Cells have two or more chromosomes contained within a membrane - delimited organelle called the nucleaus.
Prokaryotic cells lack a membrane-delimited nucleus
Nucleiod
an irregularly shaped region found in prokaryotic cells that contains the prokaryotic chromosomes.
Prokaryotic Chromosomes
Usually contain a single circle of double-stranded DNA molecule as their genetic material. However some have a linear DNA chromosome.
Prokaryotes with more than one chromosome....
Vibrio Cholerae (cholera) and Borrelia burgdorferi (lyme disease)
Unlike the eukaryotes and some Archaea.....
Bacteria do not use histone proteins to package their DNA
Planctomycetes
a phylum of bacteria that has a membrane-bound DNA-containing region present
Gemata obscuriglobulus
has a nuceoid that is found in the nuclear body which is enclosed by a double membrane called the nuclear body envelope
Plasmids
extrachromosomal DNA molecules found in prokaryotes. double stranded DNA molecules that can exist independently of the chromosome. most plasmids are circular.
Borrelia burgdorferi (talkin' bout plasmids)
numerous different plasmids have been identified within single species;
this one has 12 linear plasmids and 9 circular plasmids.
Linear plasmids
have special structures or sequences at their ends that prevent their degredation and permit their replication.
Episomes
plasmids that have integrated into the chromosome and thus are replicated with the chromosome.
Curing
The loss of a plasmid due to unequal dividing. Can occur spontaneously or be induced by treatments that inhibit plasmid replication but not host cell production.
Curing treatments involve using..
Curing treatments involve using acridine mutagens, UV and ionizing radiation, thymine starvation, antibiotics, and growth above optimum temperatures.
Types of Plasmids
Fertility Factor(F), Resistance Factors (R), Col plasmids, Virulence, Metabolic
Fertility Factor (F)
is a conjugative plasmid. F-factor plasmid possesses genes that direct the formation of sex pili that attach an F+ cell to F- cell. Also have several segments called insertion sequences that enable the F plasmid to integrate into the host cell chromosome. Thus, the F factor is an episome.
F+ Cell
contains the F plasmid
F- Cell
lacks the F plasmid
Resistance Factors (R factors, R Plasmids)
are able to confer antibiotic resistance on cells that contain them. R Factors typically have genese that code for enzymes capable of destroying or modifying antibiotics.
R plasmid R100
ound in E. coli, shingella, and salmonella, and Preus, causes resistance to strptomycin, chloramphenicol, tetracycline, and mercury.
Col plasmids
possess genes for the synthesis of bacteriocins known as colicins that are directed against E.coli.
Bacteriocins
bacterial proteins that destroy other bacteria
Col plasmid ColE1
found in E.coli. Responsible for the production of ColicinE1
Cloacins
kill Enterobacter species
Col plasmid CloDF13
found in Enterobacter cloacai is responsible for the production of cloacin DF13, a bacteriocin that kills Enterobacter cloacae
Why are bacteriocin-producing strains not sensitive to the actions of their own bacteriocins?
The reason for such immunity is that along with bacteriocins, producing strains make proteins that counteract their. Often synthetic and immunity genes are on the same operon, which allows coordinate regulation of their expression.

Losing te immunity genes makes bacteriocin-producing strains sensitve to the actions of their own proteins.
Virulence plasmids
encode factors that make their hosts more pathogenic
enterotoxigenic strands of E.coli
cause traveler's diarrha because they contain a plasmid that codes for an enterotoxican
Metabolic Plasmids
carry genes for the enzyme that degrade substances such as aromatic compounds (toluene), sugar, (lactose), etc
The TOL plasmid
plasmid of pseudomonas aeruginosa codes for an enzyme that degrades toluene
sym plasmid
plasmid of Rhizobium carries genes that induce nodule formation in leguemes so that nitrogen fixation can take place.
gram positive cell walls
walls consists essentially of a peptidoglycan layer. 20-80 nm thick
gram negative cell walls
consists of an outer membrane and a peptidoglycan layer
2-7 nm thick covered by outer membrane 7- 8 nm thick
Thicker peptidoglycan
because of the thicker peptidoglycan layer, the walls of gram positive bacteria are more resistant to osmotic pressure than those of gram-negative bacteria
Cell envelope
everything from the plasma membrane outward. Includes the plasma membrane, cell wall, and other structures like capsules
Peptidoglycan (murein)
an enormous meshlike polymer composed of many identicle subunits
A subunit of the peptidoglycan polymer contains two sugar derivatives,....
N-acetylglucosamine (NAG) and N-acetylemuramic acid (NAM) and several different amino acides
Three amino acids not found in proteins
D- Glutamic acid, D - alanine, and meso-diaminopimelic acid.
D - amino acids...
protect against degeneration by most peptidases because these peptidases only recognize L-amino acids.
The backbone of a peptidoglycan
composed of alternating NAG and NAM
peptigoglycans....
joined by cross-links between peptides of adjacent strands. strand is helical, and peptides extend out from the backbone at right angels to each other
A peptide of four alternating D- and L- amino acids is connected to ...
the carboxyl group of NAM.
In E.coli, one of the amino acids of the tetrapeptide is always a
diamino acid
meso-diaminopimelic acid (DAP)
the diaminio acid found in gram negative bacteria like E-coli
L-Lysine
the tetrapeptide diamino acid found in gram positive bacteria like Staphyloccus aureus
In gram negative bacteria like E.coli, the carboxyl group of the terminal alanin is cross-linked directly to the amino group of DAP
In gram-positive bacteria like Staphyloccus aureua, peptide interbridges (5 glycine residues) may be used to crosslink the terminal alanine to lysine
sacculus
relatively porous, elastic and somewhat stretchable sacs. Example of Bacillus Megaterium.