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138 Cards in this Set

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Definition of Microbiology?
Area of Biology that deals with living things too small to be seen without magnification
What branch of Microbiology studies Bacteria?
Bacteriology
What branch of Microbiology studies Virus?
Virology
What Branch of Microbiology studies Fungi?
Mycology
What Branch of Microbiology studies Algae?
Phycology
What Branch of Microbiology studies Protozoa?
Protozoology
What branch of Microbiology studies Helminths?
Parasitology
Prokaryotic VS. Eukaryotic
Prokaryotic= NO nucleus, no membrane enclosed organelles

Eukaryotic= HAS nucleus, has membrane enclosed organelles
What metric scale measures Virus?
nm (nanometer)
What metric scale measures bacteria?
micrometer
What is the Spontaneous Generation Theory and who DISPROVED it?
living things will suddenly appear from nonliving matter (meat left out=maggots, old rags and thrown out food=mice)

PASTEUR disproved
What is Biogenesis theory?
Living things arise from other living things of the same kind (cats from cats, mice from mice)
What did Leeuwenhoek contribute to Microbiology?
-developed single lense microscope,
-didn't share knowledge,
-father of bacteriology and protozoology
What did Louis Pasteur contribute to Microbiology?
- Disproved spontaneous generation theory
-microbes in air contaminate open broths (swan necked flask)
-certain organsisms cause certain diseases
What did Robert Koch contribute to Microbiology?
-Proved germ theory of disease by finding causative for Anthrax
-ISOLATION, INOCULATION, MEDIA, PURE CULTURES, MICROSCOPE, PREPARATION
Define Pathogen:
an organism that can cause disease in the normal healthy individual
Define Normal Flora:
microbes that normally live in or on a human, and do not normally cause disease
Define Taxonomy:
formal system for organizing, classifying, and naming living things
What is the order of the Taxa?
Domain
Kingdom
Phylum
Class
Order
Family
Genus
Species
"Did King Popeye Come Over For Green Spinach"
How to write a Scientific Name?
1) write Genus then Species
2) genus is capitalized, speices is lower cased
3) both genus and species are underlined or written in italics
the 5 i's?
1) inoculation- bacteria into sterile broth or solid media w/ loop or needle
2) incubation- inoculated broth in a specific tempurature for a set time
3) isolation- isolate single colony on petri plate to obtain pure culture
4) inspection- observe growth, observe results of stains and biochemical tests
5) identification- results of tests and Bergey's Manual to identify genus and species of microorganism
What is Pure Culture?
one microbe growing in culture medium
What is Mixed Culture?
more than one microbe growing in sample or culture medium
Liquid media?
-called BROTH (in test tube)
-no gelling agent (no agar)
-ex: nutrient broth
Semisolid Media?
-softconsistency (in test tube)
-small amount of agar
-ex: motility
Solid Media?
-solid, more consistent
-in test tube or petri plate
-larger amount of agar
-ex: nutrient agar, tsa
What is Agar?
complex polysaccharide isolated form of red algae.(gelidium)
-Fanny Hesse suggested use of agar
Who developed the Petri Plate?
Richard Petri
What is a Simple Stain?
-uses a SINGLE dye to stain cell
-distinguishes shape/size/arrangement of cells
-EX: crystal violet, methylene blue
What is a Differential Stain?
-2 different colored dyes; primary and counter
-distinguishes cell types/parts
-gram, acid fast, endospore
3 basic bacterial shapes?
Coccus (round/oval/bean)
Bacillus(rod shaped/long)
Spiral or Curve
-vibrio(comma)
-sprillum(rigid spiral/helix)
-spriochete(flexible spring shape)
What is the atypical bacterial shape?
pleomorphic rods- cells of same species vary in shape and size
What is Motile and Nonmotile?
MOTILE: will flip, rotate, go straight

NONMOTILE: only exhibit "brownian movement"
How do Prokaryotic (bacterial) flagella operate?
360 degree movement (run and tumble)
tumble = clockwise
run= counterclockwise
What are Fimbriae?
many short hairs used for attatchment (allow microbe to attatch to surface)
What are Pilus?
single, long hollow appendage
to attatch to bacteria
What is the composition of the Cell Envelope?
3 outter coverings :
glycocalyx, cell wall, cell membrane
What is the function of glycocalyx?
allow bacteria to adhere to the environment, protect against phagocytosis (SLIME LAYER or CAPSULE)

not all bacteria have
What is the function of the Cell Wall?
mycoplasma does not have one.

determines shape and provide protection against osmotic changes.
What is the major molecule that composes bacterial Cell Walls?
Peptidoglycan
Gram Positive Bacteria?
-THICK peptidoglycan layer
-HAS teichoicacid
-NO outter membrane
-Stains PURPLE w/ gram
Gram Negative Bacteria?
-THIN peptidoglycan layer
-NO teichoic acid
-outter membrane external to cell wall
-Stains RED w/ gram
Composition and function of Cell Membrane?
Third layer, all bacteria have.
-composed of phospholipid bilayer w/ proteins
-DNA anchor during binary fission, location of enzymes used in ATP
What is Chromosome and its function?
one circular piece of DNA that contains genetic information of the bacterial cell
What is Plasmid and function?
extrachromosomal DNA that contains information for conjugation or drug resistance
Function of Ribosomes?
site of protein synthesis, located in cytoplasm
Function of Endospores?
xused to survive harsh conditions

only bacillus and clostridium can form these when environment becomes harsh
what are the 6 factors that effect microbes existence?
1) nutrients
2) osmotic pressure
3) temperature
4) pH
5) gas
6) other microbes
What are Macronutrients?
required in large quantities and play principle roles in cell structure and metabolism.

EX: carbon, hydrogen, nitrogen, oxygen, phosphorus, sulfer
What are Micronutrients?
required in smaller amounts needed for enzyme and pigment structure and function.

EX: calcium, sodium, potassium, manganese, zinc, copper
What is Diffusion?
the net movement of solute molecules from their area of greater concentration to lesser concentration
What is Facilitated Diffusion?
The movement of larger solute molecules from an area of greater concentration to lesser with the aid of TRANSPORT PROTEIN. (some are too large to pass without aid)
What is isotonic?
no movement of water in or out of the cell
What is Hypotonic?
external concentration is lower than internal, so water moves into the cell
What is Hypertonic?
external concentration is higher than internal, so water moves out of the cell
What is Halophile?
lives in high salt environments (archaeans)
What tempuratures do Psycrophiles prefer?
-15c to 20c
What tempuratures do Mesophiles (human pathogens)?
10c to 50c
What temperatures do Thermophiles prefer?
45c to 80c
What pH do Neurophiles prefer?
pH 6-8
What pH do acidophiles prefer?
pH 0-2
What pH do Alkalinophiles prefer?
pH 8-10
Define Aerobic gas requirement?
Must have oxygen for growth
Define Aerotolerant Anaerobe's gas requirement?
does not use oxygen for growth, can tolerate oxygen
Facultative anaerobe gas requirement?
grows with or without oxygen
Strict anaerobe gas requirements?
does not use oxygen for growth; dies in presence of oxygen
What is the Generation Time?
period of time for one cell to become 2 cells
4 Phases of Growth Curve:
LAG PHASE: no rise in number of cells

EXPONENTIAL PHASE: cells divide at maximum rate

STATIONARY PHASE: growth= death

DEATH PHASE: cell death is greater than cell death
What is the Bacteria's way of Asexual Division?
Binary Fission
Define Metabolism:
all chemical reactions of the cell
Define Anabolism (synthesis) reactions:
smaller atoms or molecules are used to make larger molecules; USES ATP
Define Catobolism (decomposition) Reactions:
larger molecules are broken down into smaller molecules; MAKES ATP
What is Catalyst?
a substance that will increase the rate of a chemical reactions.
Biological Catalyst:
enzyme that is composed of protein
Coenzymes =?
NAD and FAD

both carry 2 electrons in the from of 2 hydrogen atoms
What is mainly used for making ATP?
Glucose
What is the total energy made during Aerobic Respiration?
38 ATP
What are the 3 stages of Aerobic Respiration?
a) glcolysis- occurs in cytoplasm. involves 9 chemical reactions.

b) Krebs Cyle (TCA)-
occurs in cytoplasm, involves 9 chemical reactions in a cycle pathway, no oxygen needed

c) Electron Transport Chain-
occurs in cell membrane, electrons passed back and forth to produce ATP. oxygen NEEDED
How many ATP does one Glucose Molecule produce?
2ATP
Does Fermentation need Oxygen? EXAMPLES?
No/ uses Glycolysis ONLY.

EX:
sacchromyces Cereviseae--> co2 +ethanol (bread,beer)
LACTObacillus acidophilus--> (yogurt, buttermilk)
Anaerobic Respiration:
includes: Glycolysis, Krebs Cycle, ETC.

produces LESS than 38ATPs

final electron acceptor is NOT OXYGEN
What type of DNA is usually replicated by Replicon or Rolling Cylce?
Chromosome or Plasmid
What is Spontaneous Mutation?
A random change in DNA arising from mistakes in replication
What is Induced Mutations?
result from exposure to known mutagens.

(mutagen=any chemical or radiation that will cause changes in the DNA)
What is Conjugation (plasmid only)?
requires possession of a special plasmid with genes to make pilus = fertility plasmid

replicated by ROLLING CIRCLE
What is Transformation? (frederick griffith expermentation)
streptococcus pneumoniae.

mouse died
What is Transduction?
involves a VIRUS picking up a bacterial donor's DNA and transferring it to a recipient bacterium.

enters cell, replicated, synthesized, assembled, leave host by LYSIS
What is Transposons? (mcClintock)
"jumping genes". will move from one area of bacterial genome to another place.
FIRST DESCRIBED BY BARBARA MCCLINTOCK

chromosome/plasmid
What is the hardest microbial structure to kill?
Endospore
Define Antiseptic:
chemicals applied directly to BODY surfaces to inhibit vegetative pathogens
Define Disinfectant:
use of physical process or a chemical agent that destroys vegetative cells but NOT endospores
Define Sterilant:
kills or removes ALL viable microorganisms (inanimate objects)
Define Virucide:
chemical that destroys or inactivates viruses
Define Fungicide:
Chemical that destroys fungal spores, hyphae, and yeasts
Areas of bacterial structure on which agents can act to kill the microbe?
1) Cell Wall- become fagile and lyce by osmotic pressure (detergents and alcohol)

2) Cell Membrane- cell loses its selective permeability and cannot prevent loss of vital molecules or entry of damaging molecules. (detergents)

3) Nucleic Acid Synthesis- binding irreversibly to DNA or causing mutations in DNA prevents Transcription and Translation. (radiation, formaldehyde, ethyleneoxide)

4) alter protein function- denaturing protein prevents from working (no chemical reactions) by HEAT, ALCOHOL, ACIDS, PHENOLICS, METALLIC IONS
What are Physical Agents?
Most bacteria have a range over which they can grow. Minimum- Optimum- Maximum
What are Chemical Agents?
occur as gas, liquid, or solid.

vary from anticeptics to disinfectants to sterilants.

if solid it may be dissolved in water (aqueous) or Alcohol (tincture)
What is Chemotheraputic Agent?
a chemical that is used for the treatment of infectious diseases
What is an Antibiotic?
Metabolic product of one microorganism that inhibits or destroys other microorganisms
What is a Natural Antibiotic?
unchanged from organism that produces it; streptomyces is the most prolific producer
What is Semisynthetic Antibiotic?
Natural product is added to chemically in the lab
What is Synthetic Antibiotic?
drug is made completely in the lab
How do Antimicrobial Drugs work in the CELL WALL?
peptidoglycan in the cell wall helps to provide a rigid structure that protects agains changes in osmotic pressure in environment.
EX: penicillin and Cephalosporins
How to Antimicrobial Drugs work in the Cell Membrane?
Damage to cell membrane causes disruption in metabolism or Lysis. Target special types of Lipids
How do Antimicrobial Drugs work in Protein Synthesis?
Most inhibitors of translation react with the ribosome-mRNA complex. 2 possible targets are 30s and 50s subunit
How do Antimicrobial drugs work in Nucleic Acid?
they can block the synthesis of nucleotides, and inhibit replication
EX: sulfonamide and trimethoprim, AZT
How do Antimicrobial Drugs work in Nucleic Acid?
Some drugs act as an analog to an enzyme in a metabolic pathway.

EX:sulfa drugs
What is the most prolific producer of antibiotics?
Streptomyces
Penicillin characteristics:
Antibacterial Drug

Prevents peptidoglycan production for cell wall

Natural and Semisynthetic
Cephalosporin Characteristics:
Antibacterial Drug

Prevents peptidoglycan synthesis

more effective against G- and resistant strains
Tetracycline Characteristics:
produced by Streptomyces

4 rings

natural and semisynthetic

doxycycline and minocycline

action: bind to small ribosomal 30s subunit (inhibit protein synthesis)
Aminoglycosides Characteristics:
natural

bind to small ribosomal subunits
Nyastin Characteristics:
antifungal drug

used to control Candida infections of skin, vagina, or oral thrush or intestinal candiasis
Amphotercin B characteristics:
antifungal

used for systemic fungal infections (such as histoplasmosis or cryptococcus meningitis)
What causes resistant bacteria?
over prescribe, prescribed without culture or susceptibility test, broad spectrum usually prescribed, do not finish, antibiotics used in livestock
What is a superinfection?
disruption in the balance of normal flora
What is the definition of infection?
a condition in which pathogenic microorganisms penetrate the host defenses, enter tissues, and multiply
What is the defnition of disease?
a deviation from health due malfunction of a tissue or organ caused by microbes or their products
What is the definition of Pathogenicity?
the ability of a parasite to gain entry to hosts tissues and bring about disease
What is the definition of pathogen?
any agent capable of causing disease in a healthy person with normal immune defenses
What is the definition of Opportunistic Pathogen?
one that invades the tissues when the body defenses are suppressed
What is the definition of Virulence?
the degree of pathogenicity of a parasite
What is a mixed infection?
several agents establish a simultaneous infection
What is a Local Infection?
microbe confined to specific tissue
What is a Systemic Infection?
Pathogen spreads to many sites of systems
What is Primary Infection?
the initial infection
What is Secondary Infection?
the second infection
What is the route of the pathogen in causing infection in host?
CONTACT>colonization,infiltration,loss,allergy>INFECTION> cure,immunity,entrenchment, carrier state>DISEASE> cure, immunity,morbidity, mortality, carrier state
What is the Portal Of Entry?
site at which parasite enters the host, most microbes are adapted to a specific portal (otherwise cannot infect)
What is the Infectious Dose?
refers to the number of organisms that must be taken into the body to establish disease
What are the Mechanisms Of Adhesion?
attachment; process by which microbes gain a foothold at the portal of entry.

EX: fimbriae, glycocalyx, spikes, flagella, cilia, hooks
What is Virulence factors?
used for tissure penetration

a) Exoenzymes- chemically break down or dissolve host's barriers and spread microbes

b) Toxins- microbial poisons that aid establishment and progress of disease

c) Antiphagocytic Factors- aid the microbe by helping to escape phagocytosis

d) Antibiotic Resistance- aid in avoiding destruction by an antibiotic will add to it's violence
What is the Establishment in Target Organ?
aided by virulence factors, microbes settle in their target organ of choice and continue to cause damage
What is the Portal of Exit?
Pathogens depart by a specific avenue many times the same as entry portals
What are the Classic Stages of Infection?
a) Incubation Period- time from initial contact with infectious agent and appearance of first symptoms

b) Prodromal Stage- earliest symptoms of infection (headache, fatigue, nausea, fever)

c) Period of Invasion- microbe multiplies at highest rate, exhibits greatest toxicity and is well established in target tissue.

d) Convalescent Period- patient's immune system begins to overcome the microbe, symptoms begin to fade, patients strength returns and body is normal
Difference in Communicable and NonCommunicable disease?
Communicable- when an infected host can transmit the infectious agent to another host and establish infection in that host

Noncommunicable- arises from environmental microbes on normal flora
What is a Nosocomial Infection?
infectious diseases acquired as a result of a hospital stay
What is the definition of immunology?
study of all biological, chemical, and physical events surrounding the function of the immune system