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196 Cards in this Set

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Acellular Definition?

Examples?
Noncellular

Viruses, Prions, and Viroids.
What Characteristics of life do acellular agents lack? (4)
1. No cell structure or cell membranes
2. no metabolism
3. do not reproduce independently, utilize structures of host cell.
4. do not grow or respond to the environment.
Virus?
Miniscule, acellular, infectious agent having one or several pieces of nucleic acid-DNA or RNA.
Genome of the Virus?
The nucleic acid(s).
Viruses have an _______________ and an _______________ state.
Extracellular (outside of cell)

Intracellular (inside of cell)
Virion?
A virus in the extracellular state (outside of the cell).
Capsomere?
The proteinaceous subunit of a capsid.

Can have one type of protein or several types.
Capsid?
The protein coat surrounding the nucleic acid core within a virion.
Nucleocapsid?
The nucleic acid and its capsid together.
Envelope?
Phospholipid membrane that surrounds the nucleocapsid.

Not all virions have this.
Recognition Sites?
Bind to complementary chemicals on the surfaces of their specific host cells.
When is the capsid removed from the virus?
After the virus enters the intracellular state (once it's inside the host cell).
How are viruses compared? (6)
1. Type of genetic material
2. What kind of cells they attack
3. Shape
4. Size
5. Capsid Coat Nature
6. Envelope Presence/Absence
Viral Genome Classes?
1. dsDNA
2. ssRNA
3. ssDNA
4. dsRNA
The genome of the virus may be ___________ and composed of several molecules of nucleic acid, or it can be ___________ or ____________.
1. Linear
2. Circular
3. Singular
Viral Genomes are larger than cell genomes. (T/F)
False.
Hosts of Viruses?
Most viruses only infect certain hosts.

They can also be cell specific within a host.
Generalists?

Example?
A virus that infects many kinds of cells in many different hosts.

West Nile Virus.
Bacteriophage/Phage?
A virus that infects bacteria.

Outnumbers all bacteria, archea, and eukaryotes put together.
Virion Shapes? (3)
1. Helical
2. Polyhedral
3. Complex
Helical Virus Capsid?
Capsomeres bonded together in a spiral fashion to form a tube around the nucleic acid.
Polyhedral Virus Capsid?
roughly spherical.
Most common Polyhedral Shape?
Icosahedron (20 sides).
Complex Virus Capsids?
Many different shapes that don't fit into other categories.
Parasites have?
2 hosts (Definitive & Intermediate)
Definitive Hosts?
mature forms of parasite are present and reproducing.
Intermediate Host?
immature parasites undergo various stages of maturation. "juvenile arthropods"
Parasites infect humans in what 3 ways?
1. Ingested through vector-borne transmission
2. direct contact
3. penetration of skin/mucous membranes
Protozoa parasites enter the body through what 2 morphological forms?
1. Trophozoite
2. Cyst
Trophozoite?
feeding/reproducing stage that lives with in the host (active)
Cyst?
survives in the environment and is infective to new host. (dorment)
Parasites are based on what 4 modes of locomotion?
1. Ciliates
2. Amoebae
3. Flagellates
4. Apicomplexans
Ciliates?
"Balantidium Coli"....protozoa in the trophozoite stage and use cilia for locomotion ---> acquiring food. (basically a parasite in the GI tract of animals AKA Pig)
Amoebae?
protozoa with no defined shape and move/acquire food through use of pseudopodia. (in water & large intestine)
Flagellates? What 3 stages in its life cycle?
- protozoa that posses 1 long flagellum used for movement.
- Trypomastigotes, Epimastigotes, Amastigotes.
Apicomplexans?
alveolate protozoa whose infective forms are characterized by an ornate complex of organelles at their apical ends ---> non-motile/spore-like shapes. (mosquito!)
Entamoeba Histolytica?
carried asymptomatically through digestive tracts, occurs through drinking H20 contaminated with feces.
3 types of Amebiasis?
1. Luminal Amebiasis
2. Amebic Dysentery
3. Invasive extraintestinal amebiasis
Luminal Amebiasis?
in healthy people, asymptomatic, trophozoites remain in lumen of intestine. (little tissue damage)
Amebic Dysentery?
more serious/common, diarrhea/colitis/ulcertation ---> bloody mucus- containing stools.
Invasive extraintestinal amebiasis?
most serious, trophozoites invade peritoneal cavity & bloodstream. (found in liver, spleen, lungs, kidneys, and brain)
What are the 2 rare Amoebaes that cause infections in the brain and are found in water?
Acanthanmoeba and Naegleria
Acanthanmoeba?
enters through cuts/scrapes on skin through conjunctivia abrasions from contact lens/trauma
Naegleria?
flagellated form in addition to amoeboid/cyst stages.
Amebic Encephalitis?
common disease w/ Acanthamoeba causing headache/altered mental state/neurological deficit. symptoms worsen then you die.
Amebic Meningoencephalitis?
disease in brain with naegleria --> inflammation of brain/meningies (death with in 3-7 days)
Trypanosoma Cruzi causes what? Is in most? Transmission through?
causes Chaga's disease, most mammals/humans harbor organism. Transmission through bite of true bugs (sucking bugs feed from BV in lips ---> "kissing bugs")
What are the 5 Flagellate parasites?
1. Trypanosoma Cruzi
2. Trypanosoma Brucei
3. Leishmania
4. Giardia intestinalis
5. Trichomonas Vaginalis
Chaga's Disease has what 4 stages?
1. Acute stage
2. Generalized stage
3. Chronic stage
4. Symptomatic stage
Acute stage in Chagas disease?
swelling @ sites of bugs (the bite ---> aka chagoma)
Generlaized stage in Chagas disease?
with fever, swollen lymph nodes, myocarditis, enlargement of spleen, esophagus & colon. (in blood)
Chronic stage in Chagas disease?
asymptomatic and last for years
Symptomatic stage in Chagas disease?
results in heart failure (form pseudocysts --> clumps of amastogotes)
Trypanosoma Brucei?
- "african sleeping sickness" (coma)
- involves the Tseste fly that either bites you or if you eat animal that has been bitten.
This ciliated parasite is a major cause of dysentery and balantidiasis characterized by persistent diarrhea and abdominal pain...
B. Coli
The arthropod vector of the disease African Sleeping Sickness...
Tsetse fly
Parasitic protozoan responible for sexually transmitted diseases in humans...
Trichomonas
Parastic helminth responsible for elephantitis...
Wuchereria
Untreated African Sleeping Sickness can invade the ___________ causing _________. Which is _____% fatal if left untreated.
1. Central Nervous System
2. Meningoencephalitis
3. 100%
Leishmania?
protozoa hosted by wild/domestic dogs and small rodents.
What are the 2 developmental stages in Leishmania?
1. Amastigotes
2. Promastigotes
Amastigotes?
In Leishmania, lack flagella & multiply w/ in a mammalian host macrophages & monocytes.
Promastigotes?
In Leishmania, has a single anterior flagellum & develops extracellularly w/ in vectors gut. Double flagullated. All involves a sand fly which ingests WBC's containing Amastigotes during a blood meal.
What are the 3 clinical forms of Leishmania?
1. Cutaneous
2. Mucocutaneous
3. Visceral
Mucocutaneous Leishmania?
when skin lesions enlarge to encompass mucous membrane of mouth, nose or soft palate. Damage is severe & permanently disfiguring. (Picture of guy on Pg 658)
Visceral Leishmania?
95% fatal if untreated, macrophages spread the parasite to the liver, spleen, bone marrow & lymph nodes.
Giardia?
common waterbourne gastrointestinal disease by eating unwashed raw fruits/veggies that're contaminated by feces/water.
Trichomonas- Vaginalis?
- Parasite that lives on vulvas & in vaginas of women...urethras/prostates in men. Transmitted via sex... (STD --> Trich.)
- Causes inflammation of urethra/bladder in men.
Vaginosis?
Trich condition in women, containing pus-filled odorus discharge, lesions, ab pain & painful urination/intercourse.
(Trophozoites feed on vaginal tissue, leading erosion of epithelium)
4 Apicomplexan Parasites?
1. Plasmodium
2. Toxoplasma
3. Cryptosporidium
4. Cyclospora
Plasmodium is a _____________ parasite. Describe it.
- Apicomplexan
- Causes Malaria, where the parsites mesquito vector breeds --> attacks RBC's.
What are 4 species of Plasmodium?
1. P. Falciparum
2. P. Vivax
3. P. Ovale
4. P. Malariae
What are the 3 stages of Plasmodium?
1. Exoerythrocytic phase
2. Erythrocytic phase
3. Sporogonic phase
Exoerythrocytic phase in Plasmodium?
occurs outside of RBC's. (first 3 stages in life cycle of Plasmodium)
Erythrocytic phase in Plasmodium?
Begins when free merozoites penetrate RBC's and become in the trophozoite stage which endocytizes the RBC's hemoglobin protein. (stages 4 & 5 in Plasmodium)
Sporogonic phase in Plasmodium?
begins when female mosquito feeding on infected human ingests gametocytes within RBC's. (stages 6-9 in Plasmodium)
4 genetic traits that increase their resistance to Malaria?
1. Sickle-cell trait
2. Hemoglobin C
3. Glucose 6 phosphate dehydrogenase
4. Duffy
What is Sickle-cell trait?
people produce abnormal type of hemoglobin called Hemoglobin S, which causes RBC's to be sickle-shaped and makes RBC's resist penetration by Plasmodium.
What is Hemoglobin C trait?
humans with 2 genes for Hemoglobin C are invulnerable to malaria. The mechanism by which this mutation provides protection is unknown.
What is Glucose 6 phosphate dehydrogenase trait?
genetic deficiency in which Trophozoites must acquire this enzyme from human host before the Trophzoite can synthesize DNA; humans without the enzyme are spared to malaria.
What is Duffy trait?
lack of antigens on RBC's. Because P. Vivax requires Duffy antigens to attach to and infect RBC's, Duffy-negative individuals are resistant to this species.
Toxoplasma Gondii?
25% of world is infected. Wild/Domestic animals and birds are major reservoirs. Cats are definitive host in which protozoan reproduces sexually. Get it by eating under-cooked meat containing the parasite or by inhalation/ingestion of contaminated soil.
Majority of people with Toxoplasma Gondii show ________________, a small percentage develop ___________. Characteristics of disease?
More severe in who?
- no symptoms
- Toxoplasmosis
- fever, headache muscle pain, sore throat, swollen lymph nodes/neck.
- AIDS patients and Fetuses.
Cryptosporidium Enteritis? Life threatening to who?
- disease of animals that's transmitted to people. C. Parvum causes the disease. Carried asymptomatically and found in waterways with contaminated livestock wastes.
- HIV +, reveals that a person also has AIDS.
Cyclospora Cayetanensis? How do you get it? More severe to who?
- waterbourne apicomplexan. Get by eating/drinking oocysts in contaminated food/water. Enters intestine causing cramps, watery diarrhea, myalgia (muscle pain), and fever.
- More severe in AIDS patients causing dehydration and weight loss.
Poxviridae?
Double stranded DNA virus
Stages of the lesions on poxvirus infections? (6)
1. Macule
2, Papule
3. Vesicle
4. Pustule
5. Crust
6. Scar
Infections with poxviruses occur primarily through which 2 ways?
1. inhalation of viruses in droplets or dried crusts
2 main poxvirus diseases of humans?
1. Smallpox
2. Molluscum contagiosum
Small pox is commonly know as what?
Variola
2 forms/strains of Variola?
Variola major and Variola minor
Variola Major?
cause severe disease and can be lethal compared to Variola Minor
Variola Minor?
less severe disease compared to Variola Major
What do Variola major and minor have in common? (3)
1. infect internal organs
2. cause fever
3. leave severe scars on the skin of survivors (especially face)
Molluscum Contagiosum?
1.Less severe compared to small pox
2. less noticeable, smaller, smooth, waxy pustules
Where does Molluscum Contagiosum typically occur?
Face, trunk, and external genitalia
Herpesviridae?
1. like to infect nervous tissue
2. can go dormant and be reactivated
HHV-1?
1. Known as "above the waist"
2. Produce itchy skin lesions on the lips known as Fever blisters or cold sores
3. can be accompanied by flulike symptoms
HHV-2?
1. Known as "below the waist"
2. associated with painful lesions on the genitalia (STD)
Ocular Herpes Ocular?
1. infection caused by latent (dormant) herpesviruses (HHV-1)
2. symptoms include: gritty feeling, conjunctivitis, pain, and sensitivity to light.
Whitlow?
occurs when either HHV-1 or HHV-2 enters enters a cut or break in the skin of a finger
Neonatal Herpes?
caused by HHV-2
fetus can be infected in utero if the virus crosses the placental barrier, but more likey for a baby to be infected at birth if a cesarean section is not performed
Human Herpesvirus 3 is commonly known as?
VZV- Varicella- Zoster Virus
Varicella is commonly called what?
Chicken Pox
Shingles?
The reactivated form of chicken pox that is extremely painful at the distal end of the nerve.
dermatome?
localization of shingle lesions along a band of skin
HHV-4?
known as the Epstein-Barr Virus (EBV)
2 Diseases EBV is known for?
1. Burkitt's Lymphoma
2. infectious mononucleosis (mono)- "kissing disease"
EBV is an etiological agent of ? (4)
1. nasopharyngeal cancer
2. chronic fatigue syndrome
3. oral hairy leukoplakia
4. Hodgkins lymphoma
HHV-5
Cytomegalovirus; CMV (cells infected become large)
CMV transmission? (7)
bodily secretions, including saliva, mucus, milk, urine, feces, semen, and cervical secretions
CMV may also be?
teratogenic (cause birth defects)
Which HHV is know to have an "owl eye" cell?
HHV-5 CMV (cytomegalovirus)
HHV_^ is in what genus?
Roseolovirus which causes roseola
Roseola?
illlness in children causing abrupt fever, sore throat, enlarged lymph nodes, and a faint pink rash on the face, neck, trunk, and thighs
what is MS linked to?
HHV-6; Roseolovirus
HHV-8 is known as ?
Rhadinovirus
Rhadinovirus?
causes Kaposi's sarcoma- a cancer seen in aids patients
virus associated with papillomaviridae?
Papillomavirus
papillomas?
caused by the papillomaviruses; commonly known as warts
condylomata acuminata?
genital warts with cauliflower-like growth caused by the papillomaviruses
Papillomavirus transmission? (2)
direct contact and fomites
Vaccine that protects against the most common strains of sexually transmitted papillomaviruses?
Gardasil
polyomaviruses (polyomaviridae)?
group of viruses capable of causing several different tumors in animals and humans.
2 human polyomaviruses?
1. BK virus
2. JC virus
BK and JC viruses?
1. spread via the respiratory route
2. initially infect the lymphocytes
3. latent infections can become established in the kidneys
progressive multifocal leukoencephalopathy (PML)
rare and fatal disease caused by the latent infections of the JC virus that reach the brain
Adenoviridae?
one of the many causative agents of the "common cold"
adenoviruses can also cause? (2)
1. mild diarrhea in children
2. pinkeye
Hepadnaviridae? (3)
1. partially dsDNA and partially ssDNA
2. responsible for the Hepatitis B virus (HBV)
3. effects the liver
Hepatitis B infections? (2)
1. Only DNA virus that causes hepatitis
2. co-infection with hep D virus can cause permanent liver damage
3. AKA serum hepatitis
Jaundice?
a yellowing of the skin and eyes ---> occurs when a greenish-yellowish wast product called bilirubin accumulates in the blood.
the role of HBV in hepatic cancer? (4)
1. large number of hepatic cancer cases in geographic areas that also have high prevalence of HBV
2. The HBV genome has been found integrated into hepatic cancer cells
3. hepatic cancer cells typically express HBV antigen
4. Chronic carriers of HBV are 200 times more likely to develop hepatic cancer than are noncarriers.
Parvoviruses?
the only pathogens of humans with a ssDNA genome
the smallest of the DNA viruses
the primary parvovirus of humans? and it is in what genus?
1. B19 virus
2. Erythrovirus
what causes erythema infectiosum (fifth disease)?
B19 Virus
what is erythema infectiosum or fifth disease?
infectous reddening of the skin----> sunlight induced
Lytic Replication?
The replication cycle in which the host cell usually lyses or dies.
The 6 Stages of Lytic Replication?
1. Attachment
2. Entry
3. Bacterial Chromosome Degraded
4. Synthesis
5. Assembly
6. Release
Lysogenic Replication?
Process of viral replication in which a bacteriophage enters a bacterial cell, inserts into the new DNA of a host, and remains inactive. Phage will replicate and later will leave the chromosome.
The 8 Stages of Lysogenic Replication?
1. Attachment
2. Entry
3. Prophage in Chromosome
4. Replication of chromosome and virus; cell division(s)
5. Induction
6. Synthesis
7. Assembly
8. Release
The 5 Basic Steps of Animal Virus Replication?
1. Attachment
2. Entry
3. Synthesis
4. Assembly
5. Release
(6. Latency; only in some animal viruses!!)
What do animal viruses typically use for attachment (step 1)?
Typically have glycoprotein spikes or other attachment molecules on their capsids or envelopes.
The 3 mechanisms of entry for animal viruses?
1. Direct Penetration
2. Membrane Fusion
3. Endocytosis
Direct Penetration of animal virus?
Viral capsid attaches and sinks into the cytoplasmic membrane.
Membrane Fusion of animal virus?
the viral envelope and host cell membrane fuse, releasing the capsid into the cells cytoplasm
Endocytosis of animal virus?
cytoplasmic membrane engulfs virus.
What are the 3 parasitic helminths?
1. Cestodes
2. Trematodes
3. Nematodes
Cestodes are also known as ________. Tell me about them.
- Tapeworms
- No digestive system, are primitive, have a scolex (small organ that has suckers/hooks attached to tissues), proglottids (grows from neck remaining attached), strobilae (chain of proglottids), & gravid (full of fertilized eggs).
What are the 3 types of Cestodes?
1. Taenia Saginata
2. Taenia Solium
3. Echinococcus Granulosus
Taenia Saginata is known as ______ which is in _____.
-beef tapeworm
-cows
Taenia Solium is known as _______ which is in ______.
-pork tapeworm
-pigs
Echinococcus Granulosus is known as ________ which is in _____. It can form ______.
-dog tapeworm
-dogs
- can form "hydatid" ---> cysts in any organ but mainly in the liver.
Trematodes are also known as ______/_______. Tell me about them. What are they in?
- Flukes/Flatworms.
- Incomplete digestive system w/ only one opening, shorter than a tapeworm and is Monoecious (in all flukes, not self-fertile)
- Snail/Fish/Plant.
What are the 2 types of Trematodes?
1. Liver Flukes
2. Blood Flukes
Liver Flukes? What are its 2 species?
- Infect sheep/cattle, can infect humans. Larva leaves intestines & goes into bile ducts in the liver.
1. Fasciola Hepatica
2. Fasciola Gigantica
Blood Flukes are in the genus of ____________ which causes ____________. What is that?
- Schistosoma
- Schistosomiasis
- potentially fatal disease and 1 of the major health problems in the world.
What are the 3 geographically limited species of Schistosoma that infect humans? Where do you find them? What area of the body do they effect?
1. S. Mansoni (Caribbean, Venezuela, Brazil, Arabia & Africa) *INTESTINAL*
2. S. Haematobium (Africa & India) *BLADDER/URETERS*
3. S. Japonicum (China, Taiwan, Phillippines, & Japan) *INTESTINAL*
Nematodes are also known as ________. Tell me about it.
- Roundworms
- Most complex, complete digestive system, has 2 openings.
What are the 4 types of Nematodes?
1. Ascaris Lumbricoides
2. Hookworms
3. Enterobius Vermicularis
4. Wuchereria Bancrofti
Ascaris Lumbricoides?
- Most common nematode, in tropical regions, largest nematode (30 CM IN LENGTH!), produce 200,000 eggs a day, develop in human intestines, can be fatal, treatment is 90% effective with use of Albendazole & Mebendazole.
Hookworms also goes by __________ & ____________. Tell me about it.
- Ancyiostoma & Necator
- Go through skin to BV to heart & lungs. Cough up & swallow ---> goes to intestines. Leads to rash or inflammatory response. Get from being barefoot.
Enterobius Vermicularis is also known as _________. Tell me about it.
- Pinworms
- Eggs are deposited around the anus. Usually ingested by tainted food/water. You know you have it by insane itching on your anus.
Wuchereria Bancrofti?
Nematode that causes "Filariasis", infects lymphatic system. End result is "Elephantiasis" in which tissues enlarge & harden in certain areas. (legs)
Synthesis of Animal Viruses? (in general)
Each type (DNA or RNA---ds or ss) of animal virus has their own strategy for synthesis.
dsDNA Synthesis?
1.) dsDNA genome enters the nucleus of the cell and the cellular enzymes replicate the viral DNA in the same manner as they replicate host DNA.

2.) mRNA is transcribed from viral DNA in the nucleus and capsomere proteins are made in the cytoplasm by host ribosomes.

3.) Capsomeres enter nucleus and virions spontaneously assemble.
The 2 exceptions of regimen of dsDNA viruses?
1. Poxviruses do all their synthesis in the host cell's cytoplasm and never enters the nucleus.

2. Hep. B uses RNA as an intermediary instead of replicating DNA from a DNA template.
ssDNA Virus synthesis?
Parvo virus.

1. Enters nucleus of cell
2. Host enzymes produce new strand of DNA complementary to the viral genome.
3. The new complementary Strand bonds to ssDNA of the virus to form a dsDNA molecule.
4 Types of RNA viruses?
1. Positive sense ssRNA (+ssRNA)
2. Retroviruses (kind of +ssRNA)
3. Negative sense ssRNA (-ssRNA)
4. dsRNA
positive-strand RNA (+RNA)?
single-stranded viral RNA that can act directly as mRNA.
+ssRNA Virus synthesis?
A complementary negative-strand RNA is transcribed from the +ssRNA genome by viral RNA polymerase.

The -RNA then serves as a template for multiple +ssRNA genomes.
+ssRNA Retrovirus synthesis?
Use a DNA as an intermediary that is transcribed from +RNA by reverse transcriptase carried within the capsid. The DNA intermediary acts as a templatefor the synthesis of additional +RNA molecules, which act both as mRNA for protein synthesis and as genomes for new virions.
+ssRNA retrovirus example?
HIV
Negative Sense ssRNA (-ssRNA) synthesis?
Overcomes a unique problem with -RNA not recognized by ribosomes by carrying an enzyme within its capsid called RNA-dependent RNA transcriptase which transcribes +RNA from the virus' -RNA genome.

Translation then occurs as normal.
-ssRNA examples? (2)
Rabies and the Flu.
dsRNA Virus synthesis?
Positive strand of the molecules serves as the mRNA for the translation of proteins, one of which is an RNA polymerase that transcribes dsRNA. Acts similar to that of regular DNA synthesis.
dsRNA example?
rotavirus- responsible for diarrhea in infants.
Neoplasia?
uncontrolled cell division within a multi cellular animal
tumor?
mass of neoplastic cells
benign tumor?
does not travel through out body (stays in one place)
generally not harmful
malignant tumor?
travels throughout body and invades tissues and organs by creating new tumors.
Metastasis?
process of malignant tumors invading other tissues and organs, creating new tumors.
cancers?
malignant tumors
oncogenes and protooncogenes?
oncogenes are genes that promote cancer (active form)

Protooncogenes are the INACTIVE form of oncogenes.
4 factors that activate oncogenes?
-UV Light
-Radiation
-Carcinogens
-viruses
what percent of cancers do viruses cause?
20-25%
How do viruses cause cancer? 3 ways
-carries oncogenes in its genome
-promotes oncogenes in body
-inserts itself into the repressor genes for oncogenes.
Viruses that cause cancer? 6
Herpesviridae
hepadnoviridae
papillomaviridae
adenoviridae
polyomaviridae
retroviridae
Culturing Viruses in Bacteria?
used for bacteriophages; easy to grow and culture
Plaques?
clear zones on bacterial medium where cells have lysed.
Animal/Plant Cultures?
-Ethical Issues for animals
-1st discovery and isolation of a virus done on the tobacco plant (TMV)
Can be costly as well to maintain
Culturing Viruses in Chicken Eggs?
-Inexpensive, Largest among cells
-Free of contaminating mirobes
-Self sufficient
-VACCINES SOMETIMES PREPARED THIS WAY
Viruses in cell culture?
-Medium with one type of cell on it (isolated from an organism)
-also called tissue cultures, but not very accurate
Cell Culture Types?
Diploid Cell Cultures

Continuous cell cultures
Diploid Cell Culture?
Created from embryonic plant, animal, or human cells that have been isolated and provided appropriate growth conditions.
Continuous Cell Culture? Example?
Longer lasting because they are derived from tumor cells(divides relentlessly).

-HeLa Cells