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123 Cards in this Set

  • Front
  • Back

germ

rapidly growing cell

Carolus Linnaeus

established the latin naming system (Genus + species)

3 classes of microorganisms

Prokaryotic, Eukaryotic, Nonliving

Prokaryotic microbobes include:

bacteria and archaea

Eukaryotic microbes include:

viruses, protozoa, fungi, algae (VPFA- vicky probably farted again)

characteristics of bacteria

peptidoglycan cell wall


reproduce by binary fission


use organic AND inorganic chemicals for energy, as well as light

aseptic technique

working in a clean environment

percentage of pathogenic bacteria

ONLY <1%!!!

characteristics of archaea

lack peptidoglycan


binary fission


extreme environments

characteristics of fungi

chitin cells wall


non photosynthetic


use organic chemicals


multicellular (mold) OR unicellular (yeast)

characteristics of protozoa

no cell wall


absorb organic chemicals or other microbes


motile (pseudopods, cilia, flagella)

What does it mean by organic chemicals?

carbon based

characteristics of algae

cellulose cell wall


photosynthetic; GREEN


produce molecular oxygen and water and make organic compounds from CO2

characteristics of viruses

acellular and nonliving


DNA/RNA core surrounded by protein coat


may have 3rd layer (lipid membrane)


inside living host

helminths

eukaryotic roundworms or flatworms


NOT a microbe (can be seen with eye)


multicellular



the 3 domains of life

1. bacteria


2. Archaea


3. Eukarya


("BAE")




Eukarya includes: protista, fungi, plantae, animalia

Robert Hooke

discovered and named cells

the cell theory

all living things are composed of cells and all cells come from preexisting cell

Antoni Van Leeuwenhoek

first to SEE microbes (bacteria)

Spontaneous generation

the idea that organisms arise from nonliving matter; caused by a "vital force"

biogenesis

idea that living organisms arise from preexisting life

Redi

experimented with maggots in covered jars of meat; no maggots; biogenesis

Needham

boiled nutrient broth in covered flasks and saw growth (but transferred the broth); spontaneous generation

Spallanzani

heated broth without transferring it; no growth; biogenesis

Louis Pasteur

finally defeated the idea of spontaneous generation and proved biogenesis by devising an S shaped flask. Also brought us fermentation and pasteurization

pasteurization

high heat for a short amount of time; kills MOST of the bacteria and extends shelf life of food

characteristics of a prokaryote

one circular chromosome not bound by membrane


no organelles


peptidoglycan (bacteria) or pseudomurein (archaea) cell wall


binary fission

characteristics of eukaryotes

paired chromosomes inside a membrane


organelles


cellulose (plants and algae) or chitin (fungi) cell walls


mitosis

coccus

spherical

types of coccus shaped cells

diplococci


streptococci


staphylococci

bacillus

rod shaped

types of bacilli

single bacillus


diplobacilli


streptobacilli

Vibrio

curved rod

Spirillum

spiral

spirochete

tight coil (longer and thinner than spirillum)

Capsules

sticky outside cell wall with polysaccharide matrix; allows cells to attach to surfaces and form biofilms, evade phagocytosis, and resist desiccation

desiccation

drying out

Flagella

for motility; move by stimulus (taxis)

fimbriae

hair-like protein extensions for attachment to surfaces, colonization, and biofilm formation

Pili

longer and thicker than fimbriae but less numerous; attachment; 2 types

peptidoglycan

polymer of disaccharide (NAG and NAM)


cross linked by polypeptides

bacterial motility

clockwise: moves backwards (tumbles)


counterclockwise: moves cell forward (run)

peritrichous flagella

many all over

monotrichous flagella

one; polar

lophotrichous

bundle at one end; polar

amphitrichous

couple at both ends; polar

the 2 types of pili

1. conjugation pili for transferring DNA


2. others facilitate the "grappling hook" motility (twitching)

osmotolysis

popping of cell; the cell wall prevents this by giving structural strength and swelling rather than popping

gram postitive

thick peptidoglycan


teichoic acids (bind cations)


purple

gram negative

thin peptidoglycan


outer membrane with lipopolysaccharide (LPS) layer; contains lipid A, endotoxin


periplasmic space


red/pink

the acid fast cell wall

a peptidoglycan cell wall with waxy lipids called mycolic acids




determining whether a cell has an acid fact cell wall or a nonacid fast cell wall can help scientists identify pathogens

substances that damage prokaryotic cell wall

lysosomes and penicillin

lysosomes

cleaves glycosidic bonds in peptidoglycan to break open cells

penicillin

antibiotic produced by fungus; inhibits cross linkage formation in cell wall

protoplast

cell with a destroyed cell wall; susceptible to osmoticlysis (bursting)

what is the plasma membrane composed of?

a phospholipid bilayer


- polar region (hydrophilic)


- 2 non polar regions (lipid tails)

peripheral proteins

not embedded in the membrane

integral/transmembrane proteins

are embedded in the membrane

simple diffusion

no energy; moves from high concentration to a low concentration

facilitated diffusion

no energy; high to low concentration via transporter protein built for specific molecules

osmosis

no energy; diffusion of water through aquaporins (water channels)

active transport

ENERGY; from low to high concentration; moves against concentration gradient; requires special transporter protein (ATP)

isotonic solution

no net movement of water

hypotonic solution

water moves IN the cell; cell swells

hypertonic solution

water moves OUT of the cell; shrinks (plasmolysis)

ribosomes

catalyze protein synthesis


50S + 30A = 70S

endospores

dormant cell phase; resistant to desiccation, radiation, extreme temperatures, etc.

endosporulation

endospore formation when conditions are not conductive for cell growth

germination

the process of an endospore returning to its vegetative, active state

purpose of flagella and cilia

motility

cilia

microtubules


shorter, numerous


beat like oars

flagella

microtubules


long and thin


propel the cell by whip-like motion


(rotate in prokaryotes)

80S ribosomes in eukaryotes

free floating or on the ER

70S ribosomes in eukaryotes

only in chloroplasts and mitochondria

vacuole

organelle for structural strength; stores water and nutrients

photosynthesis

contains thylakoid (location of photosynthesis) inside of granum

mitochondria

responsible for cellular respiration

endosymbiotic hypothesis

mitochondria and chloroplasts were once ancient, free-living bacteria which were taken in by larger cells

modern examples supporting endosymbiotic hypothesis

pyrsonympha (in termites)


cyanophora (in freshwater)

metabolism

the sum of all chemical reactions in an organism

catabolism

break down; produces energy

anabolism

build up; uses energy and allows for growth

metabolic pathway

sequence of enzymatically catalyzed chemical reactions resulting in either catabolism or anabolism

enzymes

lower the activation energy of chemical reactions; speed up reactions without being used up

apoenzyme

protein component

cofactor

nonprotein component; completes the enzyme (ex: Fe in hemoglobin)

coenzyme

ORGANIC cofactor

holoenzyme

active form

apoenzyme + cofactor =

holoenzyme

factors influencing enzyme activity

temperate, pH, substrate concentration, inhibitors

as temperature increases....

enzyme activity activity also increases, until the protein is denatured by heat

the enzyme is most active at a pH of...

5.0 (or neutral)

as substrate concentration increases...

enzyme activity increases until it reaches a threshold and levels out (because enzymes can only work so fast)

competitive inhibitors

keep substrates from binding in the active site

noncompetitive inhibitors

inhibit but do NOT bind on active site


bind on allosteric site and inhibit the substrate from binding

natural/feedback inhibition

the product inhibits start of pathway

oxidation

loss of electrons

reduction

gain of electrons

redox reaction

paired reaction of oxidation and reduction (when a cell loses an electron, another one gains)

dehydrogenation

removal of entire hydrogen atom

ATP

the energy currency of a cell


generated by phosphorylation of ADP

phosphorylation

ATP synthesis

substrate level phosphorylation

energy from the transfer of a high energy phosphate to ADP generating ATP

oxidative phosphorylation

energy is released by the transfer of electrons from one compound to another (a redox reaction)


used to generate ATP via the electron transport chain

cellular respiration

energy containing molecules (lipids, proteins, glucose) oxidized to convert the stored energy to a more usable form (ATP) in the cell




ATP is generated by BOTH substrate-level and oxidative phosphorylation during cellular respiration

carbohydrate catabolism

the breakdown of carbs/sugars to produce energy in the form of ATP




carried out by 3 steps

the 3 parts of carbohydrate catabolism

1. glycolysis


2. krebs cycle (citric acid cycle)


3. electron transport chain

glycolysis

oxidation of glucose to pyruvic acid


product: ATP and NADH


takes place in cytoplasm

molecules used and produced in the process of converting one molecule of glucose to two molecules of pyruvic acid:

2 ATP used


4 ATP produced


2 NADH produced

Bridge to krebs

the newly produced pyretic acid is oxidized and decarboxylated


products: acetylcoA, NADH, carbon dioxide

Krebs

for each turn of the cycle, the stepwise oxidation of acetylcoA produces:


3NADH


1FADH2


1 ATP 2


CO2

the electron transport chain

a series of membrane bound "electron carrier" molecules are reduced and then oxidized as electrons are passed down the chain (gain and then lose electrons)

what do electron transfers accomplish?

build potential energy in the form of a proton motive share

proton motive share

used to produce ATP by chemiosmosis (transfer of hydrogen across membrane)




use of this is oxidative phosphorylation

fermentation

releases energy from the oxidation of certain organic molecules, but does not use oxygen




does not use krebs or ETC to produce ATP




not respiration, made by substrate level phosphorylation

the 2 types of fermentation

lactic acid fermentation


alcohol fermentation

lactic acid fermentation

produces lactic acid from the pyruvic acid made by glycolysis




carried out by lactic acid bacteria and oxygen deprived mitochondria

alcohol fermentation

produces ethanol and CO2 from pyruvic acid




carried out by yeasts and fungi

IgnazSemmelweis

advocatedhand washing to prevent transmission of puerperal (childbirth) fever toobstetrical patients

showedthat a silkworm disease was caused by a protozoan, confirming thatmicroorganisms can cause disease

pasteur

RobertKoch

proved that a bacterium (Bacillusanthracis)causes anthrax and provided the experimental steps, called Koch’spostulates, toprove that a specific microorganism causes a specific disease

EdwardJenner

inoculatedan 8-year-old volunteer with cowpox virus. discovered vaccination

AlexanderFleming

discovered the first antibiotic, penicillin