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22 Cards in this Set

  • Front
  • Back

Preclinical

Scale up + Good Formulation

Hydrogen bonds

S-S bond between two cyastines -> stabilize the molecule

Amino acids

Secondary arrangments in the protein.

Primary Structure*

Amino acids sequence which differs between proteins.

Secondary Structure*

3D structures which are fromed by hydrogen bonds between the amino acids.

Alpha Helix

CO interacts with the NH2 on the upper amino acids. 3.6 per round

What breaks alpha structure?

Prolein Mostly

Beta Sheets (secondary structure)

Meshor- CO-NH2


down up - R's

What force in beta sheets?

Hydrogen bonds + van der waals + ionic

Tertiary structure

Alpha-Alpha-Alpha

4 sturcture

Protein-Protein-Protein (Tat protein)

Active site

Polar amino acids!!

Binding site > Active site

Hydrophobic(binding) --> substrates

electron density +

Heset + -> better

NMR

Soluble proteins

Most proteins are

L, except the wall of bacteria (D)

Methionine

Non polar

Pka>Ph

OH

Proline

Non polar CH2-CH2-CH2(triangle)

Charged Amino Acids

Lysine + Arginine + Histidine (LAH)

Aromatic

Phenylalanine, Tyrptopan, Tyrosine ( PTT)

Dielectric higher

weaker ionic bonds water>fat>vaccum