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127 Cards in this Set

  • Front
  • Back

Anomers

A subtype of epimers in which the chiral carbon with inverted configurations was the carbonyl carbon (anomeric carbon)

Ceramide

The simplest sphingolipid, with a single hydrogen as its head group

Cerebroside

A sphingolipid containing a carbohydrate as a head group

Colligative Properties

Vapor pressure depression, boiling point elevation, freezing point depression, and osmotic pressure

Diprotic

Containing 2 hydrogens (acid), or being able to pick up 2 hydrogens (base)

Ganglioside

A sphingolipid with a head group containing an oligosaccharide and one or more N-acetylneuraminic acid (NANA) molecules

Globoside

A sphingolipid with multiple carbohydrate groups attached as a head group

Glucogenic

Amino acids that can be converted into intermediates that feed into gluconeogenesis
(All amino acids, except Leucine and Lysine)

Glycerol

3-carbon alcohol backbone for glycerophospholipids, sphingolipids and triacylglycerols

Glycosphingolipid

A sphingolipid with a head group composed of sugars; includes cerebrosides and globosides

Hess's Law

A relationship that states that the total change in any state function is the same regardless of steps, and is equal to the difference between initial and final values of that state function

Hormone-sensitive lipase

The enzyme responsible for the mobilization of fatty acids from adipocytes; responds to a decrease in insulin levels

Jacob-Monod Model

The description of the structure and function of operons in prokaryotes, in which operons have structural genes, an operator site, a promoter site, and a regulator gene

Lyase

An enzyme that catalyzes the cleavage or synthesis of a molecule without the addition or loss of water

Mutarotation

the rapid interconversion between different anomers of a sugar

NAD+ vs. NADP+

NAD+: in ETC
NADP+: in PPP and immune function

pKa

The pH at which half of the molecules of a given acid are deprotonated;
[HA] = [A-]

Prenylation

The addition of lipid groups to a molecule

Q Cycle

The shuttling of electrons between uniquinol and ubiquinone in the inner mitochondrial membrane as a part of Complex III's function

Reducing Sugars

can reduce other compounds, and can be detected by Tollen's or Benedict's reagent

Sialic Acid

The common name of N-acetylneuraminic acid (NANA), which is the terminal portion of the head group in a ganglioside

Sphingolipid

A lipid containing sphingosine or sphingoid backbone, bonded to fatty acid tails;
Include ceramide, sphingomyelins, glycosphingolipids, and gangliosides

Sphingomyelin

A sphingolipid containing a sphingosine backbone and a phosphate head group

Terpene

A class of lipids built from isoprene moieties; have carbon groups in multiples of 5

Tight Junctions

cell-cell junctions that prevent the paracellular transport of materials; tight junctions form a collar around cells and link cells within a single layer

Aldol Condensation

A reaction where an aldehyde or a ketone acts as both the electrophile and nucleophile, resulting in the formation of a carbon-carbon bond in a new molecule, called an aldol

Azimuthal Quantum Number (l)

Describes the subshell in which an electron is found; possible values range from 0 to n-1
l=0=s
l=1=p


l=2=d


l=3=f

Constitutional Isomers

Molecules that have the same molecular formulas but different connectivity; also called structural isomers

Deshielding

The phenomenon of atoms pulling electron density away from surrounding atoms; in NMR spectroscopy, pulls a group further downfield on the spectrum

Diastereomers

Non-mirror-image configurational isomers that differ at at least one, but not all, chiral carbons;
Have different chemical and physical properties

Doublet

2 peaks of identical intensity in an NMR spectrum that are equally spaced around the true chemical shift of a group of protons;
results from splitting by another hydrogen

Downfield

Movement toward the left in an NMR spectrum

Enantiomers

Nonsuperimposable mirror images of a chiral molecule; have all the same physical and chemical properties except for rotation of plane-polarized light and reactions in a chiral environment

Fingerprint Region

In an IR spectrum, the region of 1500 to 400 cm(^-1) where more complex vibration patterns, caused by the motion of the molecule as a whole, can be seen; it is characteristic of each individual molecule

Fischer Esterification

The formation of an ester from a carboxylic acid and an alcohol in acidic conditions

Flash Column Chromatography

A technique that speeds up column chromatography by forcing the solvent through the column by increasing pressure with a nonreactive gas

Fractional Distillation

A modified form of distillation used to separate 2 liquids with similar boiling points (less than 25 degrees Celsius apart); uses a fractionation column, which contains inert materials onto which the liquids can condense and reflux back into the reaction vial, allowing more refined separation.

Gabriel (malonic-ester) Synthesis

A method synthesizing amino acids that uses potassium pthalimide and diethyl bromomalonate followed by an alkyl halide; 2 substitution reactions are followed by hydrolysis and decarboxylation

Gas Chromatography

A type of chromatography used to separate vaporizable compounds; the stationary phase is a crushed metal or polymer, and the mobile phase is a nonreactive gas

Highest Occupied Molecular Orbital (HOMO)

The highest-energy molecular orbital containing electrons; in UV spectroscopy, electrons are excited from the HOMO to the LUMO

Jones Oxidation

An oxidation reaction in which primary alcohols are oxidized to carboxylic acids and secondary alcohols are oxidized to ketones; requires CrO3 dissolved with dilute sulfuric acid in acetone

Lowest Unoccupied Molecular Orbital (LUMO)

The lowest energy molecular orbital that does not contain electrons; in UV spectroscopy, electrons are excited from the HUMO to the LUMO

Meso Compound

A molecule that has chiral centers but is not optically active because it has an internal plane of symmetry

Michael Addition

A reaction in which a carbanion attacks an alpha,beta-unsaturated carbonyl

Multiplet

Peaks that have more than 4 shifts in NMR spectroscopy

Node

In orbital structure, an area where the probability of finding an electron is zero

p-orbital

An atomic orbital that is composed of 2 lobes located symmetrically about the nucleus and contains a node

Partitioning

When components in a sample adhere differentially to the mobile and stationary phases of a chromatographic setup; this causes the different substances to migrate at different speeds through the stationary phase

Principal Quantum Number (n)

Describes the shell in which an electron is found; values range from 1 to infinity

Retro-aldol Reaction

The reverse of an Aldol Condensation Reaction, in which a carbon-carbon bond is cleaved with heat and base, yielding 2 aldehydes, 2 ketones, or one of each

s-orbital

An atomic orbital that is spherical and symmetrical, centered on the nucleus

sp

50% s-character and 50% p-character

sp2

33% s-character and 67% p-character

sp3

25% s-character and 75% p-character

Spin quantum number (Ms)

Describes the intrinsic spin of the 2 electrons in an orbital by arbitrarily assigning one of the electrons a spin of +(1/2) and the other a spin of -(1/2)

Staggered Conformation

When a molecule has no overlapping substituents along the line of sight between 2 carbons, as in a Newman projection

Stationary Phase

A solid medium onto which a sample is placed for chromatography; also called the adsorbent

Strecker Synthesis

A method of synthesizing amino acids that uses condensation between an aldehyde and hydrogen cyanide, followed by hydrolysis

Transesterification

The process that transforms one ester to another when an alcohol acts as a nucleophile and displaces the alkoxy group on an ester

Triplet

3 peaks with an area ratio of 1:2:1 in an NMR spectrum that are centered around the true chemical shift of a group of protons; results from splitting by 2 equivalent hydrogens

Upfield

Movement to the right in an NMR spectrum

Wavenumber

An analog of frequency used for infrared spectra instead of wavelength

Adiabatic Process

A process that occurs without the transfer of heat into or out of the system

Alkali Metals

Elements in Group IA;
Highly reactive, readily losing one valence electron to form ionic compounds with nonmetals

Alkaline Earth Metals

Elements in Group IIA;
2+ cations with similar properties as Alkali Metals

Arrhenius Acid

A species that donates hydroxide ions (OH-) in aqueous solutions

Aufbau Principle

The concept that electrons fill energy levels in order of increasing energy levels in order of increasing energy, completely filling one sublevel before begining to fill the next

Balmer Series

Part of the emission spectrum for hydrogen, representing transitions of an electron from energy levels n > 2 to n=2

Base Dissociation Constant (Kb)

The equilibrium constant that measures the degree of dissociation for a base under specific conditions

Boyle's Law

The law stating that at constant temperature, the volume of a gaseous sample is inversely proportional to its pressure

Bronsted-Lowry Acid

A proton donor

Bronsted-Lowry Base

A proton acceptor

Chalcogens

Elements in Group VIA;
The group contains metals, nonmetals (like Oxygen), and metalloids;
Typically form -2 anions

Charle's Law

The law stating that the volume of a gas at constant pressure is directly proportional to its absolute (kelvin) temperature.

Concentration Cell

A cell that creates an electromotive force (emf or voltage) using a single chemical species in half-cells of varying concentration

Dalton's Law of Partial Pressures

The law stating that the sum of the partial pressures of the components of a gaseous mixture must equal the total pressure of the sample

Daniell Cell

An electrochemical cell in which the anode is the site of Zn metal oxidation and the cathode is the site of Cu++ ion reduction

Delocalized Orbitals

Molecular orbitals in which electron density is spread over an entire molecule, or a portion thereof, rather than being localized between two atoms

Deposition

Gas --> solid,
Or the buildup of a solid precipitate onto an electrode in electrochemical reactions

Disproportionation (Dismutation)

A redox reaction in which the same species acts as the oxidizing agent and as the oxidizing agent and as the reducing agent

Effusion

Movement of gas from one compartment to another under pressure through a small opening; follows Graham's law

Electrolysis

The process in which an electrical current is used to power an otherwise nonspontaneous decomposition reaction

Emission Spectrum

A series of discrete lines at characteristic frequencies, each representing the energy emitted when electrons in an atom return from an excited state to their ground state

Faraday Constant (F)

The total charge on 1 mole of electrons
F= 96,485 C/mol e-

First Law of Thermodynamics

The law stating that the total energy of a system and its surroundings remain constant

First-order reaction

A reaction in which the rate is directly proportional to the concentration of only one reactant

Formal Charge

The conventional assignment of charges to individual atoms of a Lewis structure for a molecule;
The total number of valence electrons in the free atom minus the total number of electrons when the atom is bonded

Galvanic Cell

An electrochemical cell that uses a spontaneous oxidation-reduction reaction to generate an electromotive force;
Also called a voltaic cell

Gay-Lussac's Law

The law stating that the pressure of a gaseous sample at constant volume is directly proportional to its absolute temperature

Graham's Law

The law stating that the rate of effusion or diffusion for a gas is inversely proportional to the square root of the gas's molar mass

Henderson-Hasselbalch equation

Equation showing the relationship of the pH or pOH of a solution of a solution to the pKa or pKb and the ratio of the concentrations of the dissociated species

Henry's Law

The law stating that the mass of a gas that dissolves in a solution is directly proportional to the partial pressure of the gas above the solution

Hess's Law

The law stating that the energy change in an overall reaction is equal to the sum of the energy changes in the individual reactions that comprise it

Hund's Rule

The rule that electrons will fill into separate orbitals with parallel spins before pairing within an orbital

Intermolecular Vs. Intramolecular

Inter- :between molecules
Intra- :within a molecule

Isobaric Process

A process that occurs at constant pressure

Law of Mass Action

The form of the equilibrium constant;
has the concentrations of products over concentrations of reactants, each raised to their stoichiometric coefficients

Maxwell-Boltzmann Distribution Curve

The distribution of the molecular speeds of gas particles at a given temperature;
As temperature increases, average speed increases and the distribution becomes wider and flatter

Mixed-Order Reaction

A reaction in which the reaction order changes over time in the rate law

Molality (m)

moles of solute / Kg of solvent

Molarity (M)

moles of solute / L of solution

Normality (N)

a concentration unit equal to the number of equivalents per liter of solution

Raoult's Law

A law stating that the partial pressure of a component in a solution is proportional to the mole fraction of that component in the solution;
Provides an explanation for vapor pressure depression seen in solutions

Reaction Quotient (Q)

Has the same form as the equilibrium constant, but the concentrations of products and reactants may not be at equlibrium;
When compared to Keq, it dictates the direction a reaction will proceed spontaneously

Second Law of Thermodynamics

The law stating that all spontaneous processes lead to an increase in the entropy of the universe

Spectator Ions

Ions involved in a reaction that do not change formula, charge, or phase;
Normally omitted from the net ionic equation

Adiabatic

A thermodynamic process that occurs with no heat exchange

Antinode

A point of zero displacement in a standing wave

Archimedes Principle

States that a body immersed in a volume of fluid experiences a buoyant force equal to the weight of the displaced fluid

Attenuation

The loss of energy of a propagating wave as a result of nonconservative forces; also known as damping

Bernoulli's Equation

An equation that relates static and dynamic pressure for a fluid to the pressure exerted on the walls of a tube and the speed of the fluid

Confounding

An error that results when a causal variable is associated with 2 other variables in a study but is not accounted for;
May falsely indicate that the 2 variables are associated

Coulomb's Law

Relates the electrostatic force between 2 charged particles to their charges and the distance between them

Dielectric Material

An insulating material used to increase capacitance

Equipoise

The state of not knowing whether there is a difference between two interversions;
Ethically necessary for comparative study of the interventions

External Validity

The ability to apply findings of a research study to other populations;
Also called generalizability

FINER method

A way to determine the usefulness of a research question on the basis of feasibility, interest, novelty, ethics, and relevance

Focal Length

The distance from a mirror or lens to the focal point

Focal Point

The point at which rays of light parallel to the axis of a mirror or lens converge, or from which they appear to diverge when reflected by a mirror or refracted by a lens

Hawthorne Effect

The tendency for research participants to change their behavior because they know they are being observed

Kirchoff's Laws

Rules that describe the conservation of charge and conservation of charge and conservation of energy within an electric circuit; includes the junction rule and loop rule

Mass defect

The difference between the sum of the masses of unbound nucleons forming a nucleus and the mass of that nucleus in the bound state

Null Hypothesis

The hypothesis of no difference;
Given enough statistical evidence, the null hypothesis may be rejected (idgi???)

Pascal's Principle

States that pressure applied to a noncompressible fluid is distributed equally to all points within that fluid and the walls of the container

Poiseuille's Law

Relates viscosity, tube dimensions, and pressure differentials to the rate of flow between 2 points in a system

Snell's Law

Relates the incident angle, refracted angle, and indices of refraction for two media

Venturi Effect

Describes the relationship between the continuity equation and Bernoulli's equation;
As cross-sectional area of a tube decreases, the speed of the fluid increases, and the pressure exerted on the walls of the tube decreases