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27 Cards in this Set

  • Front
  • Back
RNA polymerase
used in transcription; breaks hydrogen bonds between strands of DNA; catalyzes reaction to covalently connect sugars and phosphates in the backbone of the new RNA strand; works 5' to 3'
Helicase
used in replication; breaks the hydrogen bonds between strands of DNA
DNA polymerase III
used in replication; catalyzes reaction to covalently connect sugars and phosphates in the backbone of the new DNA strand; works 5' to 3'
origin of replication
where replication starts; helicase starts opening the DNA here
replication bubble
area where replication is happening
promoter
area on DNA where transcription starts
terminator
area on DNA where transcription ends
start codon
area on mRNA where translation starts; near 5' end
stop codon
area on mRNA where translation ends; near 3' end
introns
parts of the mRNA that will be removed during mRNA procressing in order to make mature mRNA
exons
parts of the mRNA that will be kept and spliced together during mRNA procressing in order to make mature mRNA
sense strand
the DNA strand that has the same base sequence as te mRNA that will be made using that gene with uracil instead of thymine; NOT transcribed
antisense strand
the DNA strand that is transcribed
peptide bond
the bond made between amino acids; created during translation
semi-conservative
term describing DNA replication; each DNA molecule that results from replication will have one old strand and one new strand
codon
three-nucleotide sequence on mRNA; can instruct ribosome to start, stop, or put in a particular amino acid
anticodon
three-nucleotide sequence on tRNA; determines which mRNA codon it can bind to and which amino acid the tRNA-activating enzyme will attach to it
free ribosomes
ribosomes in cytoplasm; make proteins for use in cell
bound ribosomes
ribosomes attached to rough ER; synthesize proteins for secretion or for lysosomes
Explain DNA replication (SL level)
Helicase unwinds the double helix, separating the two strands of DNA. Complemenatary DNA nucleotides bind to the DNA strands using hydrogen bonds (A with T, G with C). DNA polymerase connects the sugars and phospate of the nucleotides in the new strand with covalent bonds using a condensation reaction. (Animation: http://highered.mcgraw-hill.com/olc/dl/120076/bio23.swf)
Explain the significance of complementary base pairing in the conservation of the base sequence of DNA
Complementary bases pair with the old DNA strands. This will result in both resulting DNA double helices being the same as the parent DNA. Therefore, the complementary base pairing is essential in conserving the base sequence of DNA . This is a level 3 objective, so you’ll want to be able to explain this thoroughly.
Is DNA replication conservative or semi-conservative?
semi-conservative
Compare the structure of DNA and RNA (level 3 objective)
DNA: deoxyribose sugar; ATGC bases; 2 strands. RNA: ribose sugar; AUGC bases; 1 strand. Know the structures if the sugars. In both cases the base is attached to the 1' carbon of the sugar in the nucleotide and the phosphate group is attached to the 5' carbon in the nucleotide
Outline DNA transcription
RNA polymerase separates the strands of DNA for the gene. Complemenatary RNA nucleotides bind to the nontemplate DNA strand using hydrogen bonds (A with T (in DNA) or U(in RNA), G with C). RNA polymerase connects the sugars and phospate of the nucleotides in the new strand with covalent bonds using a condensation reaction. The hydrogen bonds that connect the RNA to DNA are broken and the RNA floats away. The DNA strands bond together again.
Describe the genetic code
The genetic code is composed of codons (on mRNA) that are made of triplets (groups of 3) of bases. There are 3 types of codons. Start codons tell the ribosome to start making a protein. Stop codons tell the ribosome to stop making a protein. The remaining codons tell the ribosome which amino acid to put in. The genetic code is degenerate - having more than one base triplet (codon) to code for one amino acid. However, the genetic code is not ambiguous—each codon has only one action associated with it.. The genetic code is universal - found in all living organisms. You should be able to use the codon table to answer questions. (Do NOT memorize the codon table! :) ) The mRNA is made from DNA by transcription, so the sequence of DNA determines what protein will be made.
Explain the process of translation
Translation occurs at the ribosome and leads to polypeptide formation. First, mRNA attaches to the ribosome at the start codon . The ribosome goes down the mRNA one codon at a time, adding amino acids. As it gets to each codon: 1. tRNA (carrying an amino acid) with an anticodon that is complementary to the mRNA codon comes into the ribosome & codon and anticodon hydrogen bond to hold them temporarily in place, 2. the ribosome does a hydrolysis reaction to separate the amino acid from the tRNA 3. the ribosome does a condensation reaction to attach the amino acid to the growing protein, 4. the ribosome moves on to the next codon on the mRNA. The tRNA (with no amino acid) leaves the ribosome.Translation stops when a stop codon is reached.Once a protein is made the tRNA, mRNA, protein and ribosomes separate. The protein folds up and does its job, the mRNA and ribosomes are reused, and tRNA is recycled…a new amino acid is put on it.
Discuss the relationship between one gene and one polypeptide
The theory: One gene provides the information necessary to build one polypeptide. Some proteins have multiple polypeptides and therefore require multiple genes. Exceptions: 1. Some genes code for tRNA, rRNA, and other small types of RNA which do not produce polypeptides. 2. Some genes control the expression of other genes.