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44 Cards in this Set

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Eukaryotic Transcription Factors

Proteins that influence the ability of RNA polymerase to transcribe a given gene.


There are two types:


General Transcription Factors


Regulatory Transcription Factors

Two types

Silencer sequences

Segments that the repressor protein binds to in order to decrease the Transcription rate of RNA.

Repressor

Combinatorial Controls

Most eukaryotic genes are controlled by many factors and a combination of of these factors.

Gene regulation

Three ways in which the function of regulatory factors are modulated

Binding of small effector molecules, Protein to protein interactions and Covalent modifications.

Two forms of chromatin

Closed form where the chromatin is tightly packed and makes it unaccessible to the transcription factors which prevents transcription from occuring.


Open form is where the chromatin is easily accessible to transcription factors and can transcription can take place.

DNA Methyltransferase

An enzyme that carries out DNA methylation in which a change in the chromatin structure silences gene expression.

Silencer

Epigenetics

The study of the mechanisms that leads to changes in general expression that can be passed from cell to cell and are reversible, but do not involve a change in the DNA sequence.

Epigenetic Changes

Epigenetic inheritance involves epigenetic changes that are passed from the parent to offspring.

Genomic Imprinting

A form of gene regulation in which an offspring expresses the copy of a gene from one parent, but not both.

Common components of all Viruses

Nucleic acids and protein capsids

Six steps of viral replication

Attachment


Entry


Integration


Synthesis


Viral assembly


Release

Viral Latency

Viruses may remain inactive, or latent, during which time new virus particles are not made.

Lytic Cycle

The cycle entered in which the new viral particles are made and the cell is lyced and the virus is released.

Lysogenic Cycle

The viral DNA is incorporated into the host cells chromosome as a provirus and can remain latent for many cell cycles.

Bacteriophage

Viruses that infect bacteria


The structural genes of phages are often in an operon arrangement.

Reverse Transcriptase in HIV

After HIV enters the host cell, the ss RNA is reverse transcribed into ds DNA by the enzyme.

Is HIV an enveloped virus?

Yes

What is HIV'S host cell?

Human T-cells

The three main types of mutations

Chromosome structure changes


Genome mutations


Gene mutations

The two types of point mutations are?

Transversions: a change from a purine to a pyrimidine.


Transition: a change from one purine to another purine or a pyrimidine to another pyrimidine.

Wild Type

In a natural population, the wild type is the most prevalent genotype.


Genes with multiple alleles have more than one wild type.

Whatever are the two types of suppressor mutations?

Intragenic is where the second mutant site. is within the same gene as the first.


Intragenic is where the second mutant site is in a different gene than the first.

Are mutations conditional?

Yes

What are the different cell type mutations and their heritability?

Germ line mutations occur in sperms, eggs, or one of their precursor cells.


Somatic mutations occur in body cells.

Three main types of chemical mutagens:

Base modifiers, interclading agents and base analogues.

What does a nucleotide excision repair do?

Removes damaged DNA sequences.


Can repair damaged DNA damage including: thymine dimers, chemically modified bases, missing bases, and some types of cross links.

What do population geneticists study?

They study the genetic variation within the gene pool and how it changes from one generation to another.

Define Hardy-Weinberg equilibrium

Is a simple mathematical model that relates alleles and genotype frequencies in a population.

What are two causes of microevolution?

Natural selection and mutations.

Darwinian Fitness

The relative likelihood that a genotype will survive and contribute to the gene pool of the next generation.


Is considered a measure of reproductive superiority.


Differences in reproductive achievement could be due to the fact that the fittest genotype is most likely to survive, mate and be more furtile.

Stabilizing selection

The extreme genotypes are selected against and the immediate phenotypes have the highest fitness.


Tends to decrease the genetic diversity because it eliminates alleles that case variations in phenotypes.

Genetic Drift

Random changes in allele frequencies due to random fluctuations.

Founder effect

A small group of individuals separate from a large population and establish a colony in a new location.

What are the consequences of the founder effect?

The founding population is expected to have less genetic diversity than the original population.


the founding population will have allelic frequencies that differ from the original population.

Mutations

Provides a source of genetic variation.


Involves changes in DNA sequences or chromosome numbers.


Random events that occur spontaneously at a low rate.


Provides the raw materials for evolution.


Provides new alleles.


Neutral and deleterious mutations are more likely to occur than beneficial ones.

Quantitative Traits

Any trait that varies measurably in a given species. Such traits are usually controlled by more than one generation, which is heavily influenced by environmental factors.

Selective breeding and quantitative traits

Selective breeding of a species can alter quantitative traits dramatically.

Macroevolution

Changes in the gene pool with regards to particular alleles over a measurable amount of time.

What are the two mechanisms of reproductive isolation?

Prezygotic which prevents the formation of the zygote.


Postzygotic prevents the development of a viable individual after fertilization occurs.

What is divergent evolution?

Most common form of speciation

Speciation of the founder effect

Can be rather rapid.


A small group migrates to a new location that is geographically separate from the main population.


The founder population may evolve into a new species.

Sympatric speciation in plants.

In plants, a common way for sympatric speciation to occur is by the formation of polyploids which can lead to reproductive isolation.

What is vertical evolution?

Involves the genetic changes in a series of ancestors that form a lineage.

Are changes in chromosome structure and numerical changes adaptive?

No