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8 Cards in this Set

  • Front
  • Back

PCR

in vitro method for rapid production of large amounts of specific DNA sequences. Suitable for clinical and forensic testing because only a small amount of template DNA is required as starting material.

Gel Electrophoresis

separates nucleic acids based on size

Southern blot

complementary ssDNA probe used that is tagged w/ radioactive isotope. presence or absence points to mutation.

RFLP

Restriction fragment length polymorphism (polymorphism is typically defined as a sequence variation that is found in more than 1% of the population and is clinically harmless.) Single base pair change in the DNA may cause creation or destruction of a restriction site

ASO

Probes are usually 15-21 bases long and very sensitive. Complementary to the DNA of interest. Used to detect polymorphism genetic mutations(CFTR, SC) DNA isolated from WBC is amplified, denatured, and applied to a filter, 2 rows. Complementary probe to normal gene applied to row 1. Complementary probe to disease gene applied to row 2. Test only useful if the mutation is known.

Allele Specific PCR

Allele specific PCR can be used to detect single nucleotide changes. By designing primers which hybridize to the region containing the mutation/polymorphism. Internal controls can ensure that the PCR is working properly

Northern blot

Similar to southern but contains isolate mRNA

Western blot

western blot analysis can be used to detect and quantify the amount of a particular protein: electrophoresis of protein Transfer to nylon membrane. Detection using labeled antibody system (typically an enzyme label and a chemiluminescent substrate)