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18 Cards in this Set

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What are the steps that gene expression regulates? (6)
1. Chromatin
2. Rate of transcription
3. RNA splicing
4. RNA stability
5. Rate of translation
6. Stability of protein
RNA stability
1. 5' caps to 3' tails
Nonsense mediated mRNA decay
Targets incorrect mRNAs that have premature stop codons.
What decap and degrade RNA?
Nucleases
What is iron-dependent regulation of translation of ferritin mRNA?
1.Ferritin is the major iron storage protein in cells.
2. If iron is low, ferritin is not needed.
3. IRE-BP blocks translation of the ferritin mRNA if not needed.
4. As iron increases, IRE-BP binds to iron instead of mRNA and ferritin is produced.
What kind of RNA regulates gene expression?
miRNA and RNAi
What is RNAi?
RNA interference is a method by which introduction of a dsRNA triggers destruction of any matching mRNA by nucleases.
What is the anti-sense method?
A method commonly used at the time to decrease gene expression in mammalian cells.
List the steps of the anti-sense method. (New and 4 steps).
1. Synthezie unc-22 RNA in vitro
2. Purify single stranded and double stranded RNA.
3. Inject RNA into worms.
4. Look for twitchy progeny that lose unc-22 expression.
What is the method of RNAi?
RNAi is used to "knock down" almost any gene. The siRNA triggers RNAi.
How do cells used RNAi to fight and detect viruses?
1.RNAi targets viral genes and silences them.
How do viruses fight back to the cell?
They produce a protein p19 that sticks to dsRNA and keeps RNAi from targeting viral genes.
What is the main idea of RNAi-based therapeutics?
RNAi creates the opportunity to silence the production of disease-causing proteins.
What are microRNAs?
miRNAs regulate gene expression by blocking translation.
How do miRNAs help control tumor development?
If the miRNA does not bind and block translation of the oncogene, increased cell growth and tumor can results.
RNA stability definition
Changes in the degradation rate of a message can have a large impact on protein expression. Messages with early stop codons are quickly degraded.
What is translational control?
mRNA binding proteins control the rate of translation in response to changing conditions.
microRNA definition
inhibit translation by binding to 3' UTRs in mRNA and can regulate gene expression.