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9 Cards in this Set

  • Front
  • Back

Kind of questions that would ask you to test the gene expression at DNA level?

Is there a chromosomal level change?


Is my gene of interest present?


Is there a sequence level change?


Is my model close enough related?


If our gene have been knocked out or mutated or if our transgene have been integrated into the genome?

Techniques used to test gene expression at DNA level

Karyotype ( chromosome level)


Southern hybridisation


DNA sequencing


PCR

Kind of questions that would lead you for RNA level of testing

The expression of gene of interest at a particular time?



Are there differences in transcript level of my gene between these two tissues or at these two times?

Techniques for RNA testing?

Northern blot


RT-PCR


Microarray


Cluster and heat map analysis


RNA in situ hybridisation

Techniques for RNA testing?

Northern blot


RT-PCR


Microarray


Cluster and heat map analysis


RNA in situ hybridisation

Kind of questions that can ask you to test protein level?

Is there protein being produced by my gene of interest?


- when and where is it produced?



Where in the cell is the protein localised?

Techniques for RNA testing?

Northern blot


RT-PCR


Microarray


Cluster and heat map analysis


RNA in situ hybridisation

Kind of questions that can ask you to test protein level?

Is there protein being produced by my gene of interest?


- when and where is it produced?



Where in the cell is the protein localised?

Tests for testing at protein level?

Western blot


Immunohistochemistry


Immunofluoresence


Confocal images