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103 Cards in this Set

  • Front
  • Back
Metabolism
chemical processes within a living organism in order to maintain life
Catabolism
breaking down
Anabolism
building up
Homeostasis
tendency of a system towards equilibrium regulated by physiological processes
Characteristics of living organisms
one or more cells
genetic information
reproduction
have evolved
regulate internal environment
respond to environment
able to grow
convert environmental molecules into new biological molecules
What is life?
ordered self replicating dynamic chemical reactions in equilibrium interacting with environmental materials and energy
Bacteria
prokaryotic family
Archae
prokaryotic family
Eukaryota
eukaryotic family
Biomimicry
industrial/technological design inspired by nature
Hooke and van Leeuwenhoek
microscope and cells
Examples of homeostasis
regulation of body temperature
regulation of body salinity
Prokaryotes
no nucleus
no membrane-bound organelles
one circular chromosome
binary fission
small
no endocytosis
Eukaryotes
nucleus
has membrane-bound organelles
multiple linear chromosomes
mitosis
large
endocytosis common
Turgor pressure
pressure of the central vacuole against cell wall to maintain rigidity
Internal compartmentalization
separate specialized reactions from rest of cell
Hypertonic
higher concentration of solute
Hypotonic
lower concentration of solute
Endocytosis
taking material into the cell by wrapping around it
Exocytosis
expelling material from a cell through the cell membrane
Neurons
longest cell and cannot divide
Mitochondrial & Chloroplast DNA
originates from organisms engulfed by the cell and made into organelles
Tenants of cell theory
all living things are made of cells
cell = structural/functional unit
come from preexisting cells by division
contain hereditary information
same chemical composition
energy flow of life occurs in cells
Endosymbiosis
symbiosis in which one organism lives inside the other
Facts about Prokaryotes:
5 x 10^30 bacteria on earth
bodies are 10 trillion cells, 100 trillion bacteria living in us
Common cell features:
cell membrane
DNA
ribosomes
cytoplasm
500 genes shared between all three domains
Ionic concentrations are...
maintained against the gradient by pumps at the expense of energy
Cell membrane
phospholipid bilayer
hydrophilic and hydrophobic molecule heads and tails
What goes through the cell membrane?
small nonpolar molecules like oxygen and nitrogen pass through easily
large and polar molecules use transport proteins and sometimes active transport
Functions of transmembrane proteins:
transport
intercellular joining
enzymatic activity
cell to cell recognition
signal transduction
attachment to cytoskeleton and extracellular matrix
Cytoskeleton
determines structure and movement
made of highly organized protein fibers
actin movement structure and contractual ring
tubulin microtubules and structure
Nucleus
where DNA is stored and transcription happens
Nucleolus
makes ribosomes
Mitochondria
site of aerobic respiration resulting in synthesis of ATP
inner and outer membrane
Chloroplast
site of photosynthesis
Endoplasmic Reticulum (ER)
smooth ER lacks ribosomes and synthesizes lipids
rough ER has ribosomes and makes proteins and more membrane
Ribosomes
synthesize proteins
made of protein and rRNA
Golgi Apparatus
post office of cell
receives, tags, and releases molecules
Lysosomes
contain litic enzymes that digest/destroy stuff
Why have organelles?
to sequester harmful molecules
to concentrate reactants
allow assembly of enzymes close together
Apoptosis
self-destruction of the cell when old or abberant
Anaerobic
occurring without oxygen
Aerobic
occurring with oxygen
Cytoplasmic streaming
movement of organelles within live cells
Resolution
how clearly you can tell two objects apart
long waves hard to see
short waves easier to see
Scientific method
observe and ask questions
develop hypothesis
design experiment (remember controls)
collect and interpret data
explain and generalize results
communicate findings
Gram positive
thick cell walls consist of 80 to 90 percent peptidoglycan
stains purple with crystal violet dye
Gram negative
thin layer of peptidoglycan in cell walls
outer membrane composed of lipids and proteins
does not stain with crystal violet dye
Coccus
spherical
Bacillus
rod-shaped
Spirillum
spiral-shaped
Diplo-
two stuck together
Staphylo-
clumped together
Strepto-
stranded together
Transformation
in prokaryotes, picking up naked DNA plasmids
Transduction
transferring DNA from one cell to another, particularly from virus to host
Phages
viruses that infect bacteria
Structure of bacteria:
DNA in single circular chromosome
may contain plasmids
cell wall contains peptidoglycan
sometimes has carbohydrate outer capusule
Growth of bacteria:
cell division occurs about every twenty minutes
easy to mutate
easy to grow for expression of cloned protein genes
Bacteria in biotechnology?
can be used to mass produce protein
wanted gene is inserted into plasmid with extra tag protein
vectors are DNA that control expression of the plasmid within the bacteria
Microbial protein as reporters?
bacteria create bioluminescent proteins
this is used by marine animals
can be cloned into plant or animal cells
Antibiotics
produced by microbes
inhibit the growth of other microbes
Modes of action - antibiotics
stop replication
stop transcription
stop translation
stop cell wall synthesis
stop enzymatic activity
Lipids
hydrocarbons insoluble in water because of nonpolar bonds
hydrophobic
Types and functions of lipids:
fats - store energy and insulate
phospholipids - structure of cell membranes
carotenoids - help plants capture light energy
steroids - hormones and vitamins
Carbohydrate
made of saccharides
mono- single
di- two
poly- many
Types and functions of carbohydrates:
starch - energy storage in plants
glycogen - energy storage in animals
cellulose - structural in plants
chitin - structural in arthropods
peptidoglycans - bacterial cell wall
Protein
polymer of amino acid
large polypeptides
Amino acid
twenty found in proteins
differ only in the R group
joined with peptide bonds to create polypeptides
polymerization requires energy
Structure of protein:
primary - sequence of amino acids
secondary - alpha helices and beta sheets
tertiary - 3D folding
quaternary - multiple tertiary together
Types of protein:
structural
storage
transport
hormonal
receptor
contractile
defensive
enzymatic
Nucleic acid
polymer of nucleotide
nitrogen base + phosphate + sugar (deoxyribose in DNA, ribose in RNA)
Prions
misfolded proteins that cause other proteins to be misfolded
What denatures an enzyme?
temperature
pH
salinity
Enzymes
are specific
active sites where molecules connect
reusable
lower the reaction's activation energy
Condensation vs. Hydrolysis
joins two molecules and releases water
splits one molecule with addition of water
First macromolecule?
RNA - able to catalyze reactions and encode genetic information
DNA bases are...
discovered by Watson Crick & Franklin
purine-pyrimidine paired
Adenine
Functions of RNA:
mRNA - message for protein synthesis from nucleus to cytoplasm
tRNA - adapter molecule
integral part of ribosomes
is genetic material in retroviruses
can have catalytic activity
controls gene expression
Gene facts:
3.2 billion base pairs in humans
1.2% code for protein
Codons
20 amino acids specified by 1 or more 3-base codons
3 stop codons - UAA, UAG, UGA
Central Dogma:
DNA -> RNA -> protein
transcription to translation
exception - reverse transcription occurs in retroviruses
Types of RNA:
mRNA - messenger
tRNA - transfer
rRNA - ribosomal
Transcription
DNA to mRNA
starts at the promoter, upstream of start codon
can happen simultaneously with translation in prokaryotes
Haploid
having a single set of unpaired chromosomes
Diploid
having two complete sets of chromosomes
Chromosomes in normal and sex cells:
46 chromosomes in normal haploid cells
23 chromosomes in diploid sex cells
Centromere
point where chromosome is attached to spindle fiber during division
Chromatids
two strands chromosomes split into during division
Telomeres
ends of chromosomes made up of repeating non coding sequences of bases
Direction of new DNA growth:
in the 5' to 3' direction (opposite of the old DNA strand)
Helicase
unwinds DNA
Topoisomerase
releases supercoiling by nicking DNA strand
Binding protein
prevents DNA winding back up
Primase
lays down RNA primer for DNA replication
DNA polymerase
starts at RNA primer and builds new DNA strand
leading and lagging strands
continuous construction in 5' to 3' direction
discontinuous fragmented construction in 5' to 3' direction
Okazaki fragments:
fragments of DNA between RNA primer on the lagging strand
RNase
removes RMA primer
DNA ligase
closes gaps in sugar phosphate backbone
Why telomeres?
chromosomes get shorter with each division because end RNA primer cannot be filled in
in prokaryotes hairpin loops provide primer for filling in ends
Telomerase
catalyzes the addition of lost telomere sequence
can be found in some cancerous cells
RNA polymerase
binds to promoter
unwinds and rewinds DNA
holds DNA and RNA strands
catalyzes addition of ribonucleotides to RNA strand