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30 Cards in this Set

  • Front
  • Back
How are animal viruses classified?
Taxonomic criteria based on
Genomic structure
DNA or RNA
Single stranded or double stranded
Virus particle structure
Isometric
Pleomorphic
Helical
Presence or absence of envelope
Some viruses are grouped by route of transmission, what types are there?
Disease causing viruses often grouped by route of transmission
*Enteric viruses*
Generally transmitted via fecal-oral route
Often cause gastroenteritis
Some can cause systemic disease
*Respiratory viruses*
Usually inhaled via infected respiratory droplets
Generally remain localized in respiratory tract
*Zoonotic viruses*
Transmitted from animal to human via animal vector
*Sexually transmitted viruses*
Can causes lesions on genitalia or cause systemic infections
What happens during an infection? What kind of relationship does the virus have with the host?
Outcome of infection of eukaryotic cells depends on factors independent of cell
Special importance are defense mechanisms of host
Viruses may develop relationships with normal hosts
No obvious disease or damage is caused to host
State of balanced pathogenicity
Relationships divided into two categories
Acute
persistent
What happens during acute infections?
Usually short in duration
Host may develop long lasting immunity
Result in productive infections
Produce large number of viruses during replication
Disease symptoms result from tissue damage and infection of new cells
What happens during acute infections continued?
Reproductive cycle of animal virus can be compared to virulent bacteriophage
Essential steps include
Attachment
Entry into susceptible cell
Targeting site of reproduction
Uncoating of virion
Removing protein coat exposing nucleic acid
Replication nucleic acid and protein
Maturation
Cell lysis
Spreading within host
Shedding outside host
Transmission to
What happens during persistent infections?
Viruses continually present in host
Releases from infected cell via budding
Can be divided into three categories
Latent infections
Chronic infections
Slow infections
Categories distinguished by detection of virus during period of persist
In persistent infections, what happens during latent infections?
Infection is followed by symptomless period then reactivation
Infectious particles not detected until reactivation
Symptoms of reactivation and initial disease may differ
Example
Herpes simplex viruses 1 and 2 (HSV1 and HSV2)
Shingles (zoster)
What happens during chronic infection?
Infectious virus can be detected at all times
Disease may be present or absent during extended times or may develop late
Best know example
Hepatitis B
A.k.a serum hepatitis
What happens during slow infection?
Infectious agent gradually increases in amount over long period of time
No significant symptoms apparent during this time
Two groups of infectious agents cause slow infections
Retroviruses which includes HIV
Viruses and human tumors?
Double stranded DNA viruses responsible for most virus induced tumors in humans
Tumor viruses interact with host cells on one of two ways
Virus can go through productive cycle and lyse cell
Virus can transform cell without killing it
Cancers caused by DNA viruses result from *integration of viral genome into host DNA*
Transformed genes are expressed
Uncontrolled growth results
What happens during Viral Genetic Alterations?
Genome exchange in segmented viruses
Viruses can alter their properties via
*Mutation
Genetic reassortment*
Genetic reassortment of viruses results from two viruses infecting the same cell
Each virus incorporates segments of viral DNA
One segment comes from one virion
Rest of segment come from other virion
Reassortment responsible fro *antigenic shift and antigenic drift* in influenza virus
What happens during the cultivation of host?
Viruses multiply only inside host cell
Host cells are cultivated in the laboratory in cell culture or tissue culture
Tissue culture prepared directly from an animal host is termed primary culture
What happens during quantitation, *plaque assay*, a method of studying viruses?
Determines number of viruses in solution
Know volume of solution added to actively metabolizing cells
Infection lyses cells and leads to clear zone or plaque surrounded by uninfected cells
Each plaque represents one virion
Plaques are only produced by infected cells
What happens during quantitatuon?
Counting virions with electron microscope
Used with pure preparations
Concentration determined by counting number of virions in sample
May distinguish infective from non-infective agents
What are quantal assays in quantitation?
Provides and approximate concentration
Dilutions of virus preparation administered into animal cells
Chick embryos often used
Endpoint is dilution at which 50% of inoculated host are infected or killed
*ID50 = infective dose
LD50 = lethal dose*
What is hemagglutination?
Some animal viruses clump or agglutinate with red blood cells
Termed hemagglutination
The highest dilution showing maximum agglutination is titer of the virus
What are characteristics of plant viruses?
Number of plant diseases are caused by viruses
Can be of major economic importance
Infection may be recognized via outward signs including
Pigment loss
Marks on leafs and fruit
Tumors
Stunted growth
Plants generally do not recover from viral infections
How are plant viruses spread?
Viruses infect plants through wound in plant cell wall
Viruses do not attach to specific cell receptors
Once started, infection spreads from cell to cell through plasmodesmata
Many viruses resistant to inactivation
Viruses can be transmitted through soil contaminated by prior growth
Viruses spread through grafting healthy plants to infected Viruses can spread via parasitic vine called dodder
Vine establishes simultaneous connection between two plants
Serves as conduit of transfer
Another type of infectious agent are prions, what do they do?
*Proteinaceous* infectious agent
Linked to a number of fatal human diseases
All afflictions cause brain degeneration
Brain tissue develops sponge like holes
Disease termed transmissible spongiform encephalopathies
Symptoms may not appear for years after infection
How did prions evolve?
Apparently arose following gene encoding normal prion protein
Mutation caused protein to have different folding properties
Mutated protein resistant to proteases
Normal protein sensitive
Resists UV light and nucleases
Due to lack of nucleic acid
Inactivated by chemicals that denature proteins
Viroid are another type of infectious agent what do they do?
Defines group of pathogens much smaller and distinctly different from viruses
Consist solely of small single-stranded RNA molecule
Varies in size
Have no protein coat
Allows them to be resistant to proteases
What are some more properties of viroids?
Replicates autonomously in susceptible cells
Single viroid capable of infecting a cell
Viroid RNA is circular and resistant to nuclease digestion
All identified viroids infect plants
Diseases include
Potato spindle tuber
Chrysanthemum stunt
Cadang-cadang
Some interesting information about viral reproduction
(Marine) viruses are difficult to classify, since there is no single common gene among them (Rowher)

We can study marine viruses by restriction analyses, DNA-DNA hybridization, expression (mRNA) analyses, or sequencing conserved genes such as att (attachment) or DNA polymerase.

Only 17 complete genome sequences of marine phage are known (Paul and Sullivan 2005)
What are some characteristics of Family orthomyxoviridae?
Enveloped viruses – 80-120 nm, negative stranded RNA with
8 different segments. Allows for genetic reassortment when
>1 virus infects a single cell
Types A, B, and C: Significant differences in structure,
genetics, organization, host range, epidemiologic and clinical
characteristics
Covered with surface projections or spikes -- Hemagglutinin
and neuraminidase—used to subtype influenza A virus types
Influenza in the United States?
Estimated 36,000 deaths annually
• Estimated 200,000 hospitalizations
• Influenza vaccine recommended for ~185 million Americans annually
• Coverage is yet to reach standards that is likely to prevent epidemic.
– Adults > 65 years: 65.6%
– Children 6-23 months: 7.4%
Dates to remember regarding influenza?
1918 spanish flu 20-40 million deaths
1957 asian flu 1 million deaths
1968 hong kong flu 1 million deaths
what are some characteristics of Morbillivirus?
Morbillivirus - in the Family Paramyxoviridae,
Genome: negative sense - ssRNA Host: Vertebrates
related to hepatitis and distemper viruses
what are some characteristics of the papilloma virus?
Papilloma viruses - Double stranded DNA viruses, usually no RNA phase. The early ORFs encode proteins which interact with the host genome to produce new viral DNA while late ORFs are activated only after viral DNA replication and encode for viral capsid proteins. All papillomaviruses are obligatory intranuclear organisms with specific tropism for keratinocytes. Three possible courses of events can follow papillomaviruses entry into cells: (1) viral DNA are maintained as intranuclear, extrachromosomal, circular DNA episomes, which replicates synchronously with the host cell, establishing a latent infection; (2) conversion from latent into productive infection with assembly of complete infective virions; (3) integration of viral DNA into host cellular genome, a phenomenon seen in HPV infections associated with malignant transformation
Basic characeristics of viruses?
Consist of genetic material (DNA, RNA,single or double stranded). No metabolism of their own, but rather depend on cellular machinery of host

No motility - contact hosts by diffusion

Responsible for 30-40% of bacterial mortality by viral lysis

Viruses can affect gene transfer, species composition
marine phages or viruses?
There is a decrease of one order of magnitude between rich coastal waters and oligotrophic open ocean, a decrease of between 5- 10 fold from the euphotic zone to the upper midwaters (e.g. 500 m depth, and further decrease to abyssal depths)

Release of dissolved organic material (DOM) stimulates bacterial activity and retention of nutrients in the euphotic zone