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201 Cards in this Set

  • Front
  • Back
Gram -
Bacilli
Strict Anaerobe
Liver Abscess

What is it and how did it get there?
Bacteroides Fragilis

ruptured intestinal mucosa (trauma, Sx, perf.)
Makes Vit K for Host
Bacteroides Fragilis
Type B Polysaccharide capsule
Coccobacilli pleomorphic
H Influenza Type B
Fruiting body, narrow angled, branching septate hyphae
Aspergillus Fumigatus
Fungus ball that develops in preexisitng hypersensitivity reactions
aspergillus fumigatus
Vessel invading fungi with hemorrhagic infarctions and a necrotizing bronchopneumonia
aspergillus fumigatus
Wide angled hyphae without septa
mucor spcies
vessel invades that produces hemorrhagic infarcts in the lung
mucor
diabetic with a fungus.

what is it and where does it invadE?
rhinocerebral mucormycosis
spherules with endospores in tissue, increased after California earthquakes
Coccidioides immitus ("Valley Fever")
erythema nodosum, granulomatous inflammation with caseous necrosis

Fungi of California
coccidioides
most common systemic fungal infection
Histoplasma Capsulatum
endemic in Ohio, Center Mississippi River valleys; inhalation of microconidia in dust

Bats, starlings, chickens
Histoplasma Capsulatum
Granulomatous inflammation with caseous necrosis
Yeast forms in Macs
Simulates TB lung Disease
Produces Coin Lesions, consolidation, miliary spread, and cavitation
Histoplasmosis Capsulatum
Marked dystrophic calification of granulomas in lung, multiple calcifications in spleen
Histoplasmosis Capsulatum
Broad-based buds and nuclei
Occurs in Great Lakes region and southeastern United States
blastomcyes dermatitidis
Cysts and trophozoites present, cysts attach to type I Pneumocytes, primarily an opportunistic infection
pneumocystic jiroveci
At what CD4 Cell count does pneumocystic jiroveci infect?
CD4 < 200
signs and symptoms of pneumocystic jiroveci infection
fever, dyspnea, severe hypoxemia; diffuse intra-alveolar foamy exudates with cup-shaped cysts
to visualize Pneumocystis Jiroveci
silver / Giemsa Stains
Treatment for P. Jiroveci
TMP/ SMX (given prophylactically when CD4 count < 200.
most common cause of common cold
rhinovirus
viral cause of atypical pneumonia and bronchiolitis (wheezing) in children

occurs in late fall/ winter
respiratory synctial virus
Croup causing in infants
parainfluenza
inspiratory stridor (upper airway obstruction) due to submucosal edema in trachea

Anterior X-ray showing "steeple sign" in trachea
Parainfluenza
Common pneumonia in immunocompromised host

Enlarged alveolar macs/ pneumocytes
CMV
Type A virus mostly involved
Influenzavirus
HA bings virus to cell receptor in nasal passages

NA dissolves mucus and facilitates release of viral particles
Influenza virus
common superinfection of influenza virus
staph aureus
Fever, cough, conjunctivitis, excessive nasal mucus production

Koplik spots in mouth precede onset of the rash
Rubeola Virus (measles)
Characteristic finding in Rubeola (measles virus)
Warthin-Finkeldey multinucleated giant cells are a characteristic finding
Lower respiratory tract and then spreads systematically to produce severe respiratory infection
SARS
Civets
SARS
Dx of SARS
viral detection by PCR or detection with Ab
2nd most common cause of atypical pneumonia
Chlamydia Pneumoniae
newborn pneumonia (birth canal)
Chlamydia Trachomatis
Afebrile, staccato cough (choppy cough), conjunctivitis, wheezing
Chlamydia Trachomatis
dairy farmers, veterinarians
associated with the birthing of infected sheep, cattle, and goats, handling of milk
coxiella burnetti
atypical pneumonia, myocarditis, granulomatous hepatitis
coxiella burnetti
bullous myringitis, cold autoimmune hemolytic anemia due to anti-IgM Ab
Mycoplasma pneumonia
Gram + Lancet Shaped
Step Pneumoniae
common bacterial infection superimposed on influenza pneumoniae and measles pneumonia
staph aureus
major lung pathogen in IV drug users / CF patients
S. Aureus
hemorrhagic pulmonary edema, abscess, tension pneumatocyst (intrapleural blebs) which can rupture to form tension pneumo
staph aureus
describe the bug:
corynebacterium diptheriae
gram positive rod
how does corynebactierum dipheriae work?
toxin inhibits protein synthesis by ADP ribosylation of EF-2 involved in protein synthesis; toxin impairs B-oxidation of fatty acids in heart
toxin induced pseudomembranous inflammation produces shaggy gray membranes in the oropharyn and trachea
c. diptheriae
sinusitis, otitis media, conjunctivitis (pink eye)
h. influenza
inspiratory stridor due to acute epiglottitis
h. influenza
thumbprint sign on lateral x-ray
h. influenza causing epiglottitis
most common bacterial cause of acute exacerbation of COPD
h. influenza
typical pneumonia, especially in elderly

gram - diplococcus
moraxella catarrhalis
green sputum (pyocyanin)

gram - rod
pseudomonas aeruginosa
water-loving bacteria most often transmitted by respirators
pseudomonas aeruginosa
most common cause of nosocomial pneumonia and death due to pneumonia in cystic fibrosis
p. aeruginosa
pneumonia often associated iwth infarction due to vessel invasion
pseudomonas aeruginosa
gram - rod ID by IF stain or Dieterle silver stain
Legionella pneumophilia
antigens of this gram - rod bacteria can be detected in urine

it causes pneumonia
legionella pneumophilia
water lover bacteria (water coolers, mists in grocery stores, outdoor restaurants in summer, rain forests in zoos)
legionella pneumophilia
pneumonia associated with high fever, dry cough, flu-like symptoms - water loving bacteria
legionella
tubulointerstitial disase with destruction of the JGA leading to hyporeninemic hypoaldosteronism

(type IV RTA - hyponatremia, hyperkalemia, met. acidosis)
legionella
narrow based buds, surrounded by a THICK capsule
cryptococcus neoformans
found in pigeon excreta
cryptococcus neoformans
fruiting body and narrow-angled (45 degrees) branching septat hyphae
aspergillus fumigatus
fungus ball that develops in TB cavity
aspergillus
vessel invader with hemorrhagic infarctions and necrotizing bronchopneumonia
aspergillus fumigatus
Increased IgE in lungs, eosinophilia, intense inflammation of airways and mucus plugs in terminal bronchioles FUNGUS

can cause bronchiesctasis, interstitual lung disease
aspergillus fumigatus
wide angled hyphae without septa
mucor
who gets mucor infections?
immunocompromised, mucor
what lobe of the brain does the diabetic fungus invade?
mucor infects the FRONTAL lobe
spherules with endospores in tissue, inhaling arthrospores in dust
coccidiodes immitis
what on bacterial cell wall/cell membrane induced TNF and Il-1

(Gram +)
Techoic Acid
What on outer membrane of gram - induces TNF and Il-1
Lipid A
what makes up a bacterial capsule?
polysaccharide
what makes up the capsule of bacillus anhracis?
Not polysaccharide, it is D- glutamate
what is a spores chemical composition?
keratin like coat; dipicolinic acid
name the Gram + rod (bacillus) (5 of them)
clostridium
corynebacterium
bacillus
listeria
mycobacterium
Branching filamentous gram + organisms
Acinomyces
Nocardia (weakly acid fast)
what are the pleomorphic gram - bacteria?
rickettsiae
Chlamydia (giemsa)
Name the spirochetes.
Gram -
Leptospira
borrelia (Giemsa)
Treponema
What makes up mycoplasma's cell membrane?
Sterols (has no cell wall)
what makes up the cell wall for mycobacterium?
has mycolic acid. High lipid content makes it hard to gram stain
what type of agglutins does mycoplasma make?
cold agglutinates to human RBC
Name some bugs that don't gram stain well (6)
treponema (too thin, need darkfield microscopy)
Rickettsia (intracellular parasite)
Mycobacteria (high lipid content req. acid fast stain)
Legionella pneumophilia (primarily intracellelar, stain with silver stain)
Chlamydia (intracellular parasite that lacks muramic acid)
Giema Stain
Borrelia, Plasmodium, Trypanosomes, Chlamydia
PAS Staining organisms
Stains glycogen, mucopolysaccharides

Used to dx Whipple's disease
Ziehl- Neelsen stains what?
Acid fast bacteria. Thinkin TB!
India Ink stains what?
cryptococcus neoformans
Silver Stain stains what?
Fungi, legionella
What grows on Chocolate agar with factors V (nad) and X (hematin)?
H. Influenza
What grows on Thayer-martin media?
N. Gonorrhoeae
What grows on Bordet-Gengou (potato) agar?
B. pertussis
What grows on tellurite place?
Clostridium diptheriae
What grows on loffler's media?
clostridium diptheriae
What grows on Lowenstein-Jensen agar?
mycobacterium TB
What grows on Eosin-methylene blue (EMB) agar

forms blue-black colonies with green metallic sheen)
E. Coli
What grows pink on MacConkey's agar?
Lactose-fermenting enterics
What grows on Charcoal yeast extract agar buggered with iron and cysteine?
Legionella
What grows on Sabouraud's agar?
Fungi
Name 4 OBLIGATE aerobes.
Pseudomonas
Nocardia
Mycobacterium Tuberculosis
Bacillus
Name 3 OBLIGATE Anaerobes

and why are they obligate anaerobes?
Clostridium
Bacteriodes
Actinomyces

they lack catalase and/or superoxide dismutase
-foul smelling, produce gas in tissue (CO2 and H2)
Name 2 intracellular bugs.
Ricketssia
Chlamydia
Name some faculatative intracellular organisms
Salmonella
Neisierria
Brucella
Mycobacterium
Listeria
Francisella
Legionella
Yersinia
Some Nasty Bugs May Live FacultativeLY
Shigella
Neisseria
Brucella
Mycobacterium
Listeria
Francisella
Legionella
Yersenia
Positive quellung reaction = ?
positive for capsule
examples of encapsulated bacteria
step pneumoniae
Neisseria Meningitidis
Haemophilus influenzae
Klebsiella Pneumoniae
Urease Positive Bugs
Proteus
Klebsiella
H. Pylori
Ureaplasma

Some Kinds Have Urease
yellow pigment is related to what bacteria?
staph aureus
Blue-green pigment is related to what organisms?
Pseudomonas aeruginosa
Red pigment is related to what bacteria?
Serratia Marcescens
Virulence Factor of Stap Aureus

Name it and what does it do?
Protein A - binds Fc region of Ig.

Disrupts opsonization and phagocytosis
Name 3 bugs with an IgA protease.
S. Pneumoniae
H. Influenzae
Neisseria

these bugs are also protected by thier polysaccharide capsule
Name the thing in Group A Strep (strep pyogenes) that prevents phagocytosis.
M Protein
Endotoxin of gram - bacteria does what to macs?
IL-1 --> fever
TNF --> fever, hemorrhagic tissue necrosis

NO --> hypotension, shock
Endotoxin of gram - activates coagulation cascade/ DIC by activating what?
Hageman factor
When does spore formation of a bacteria take place?
during the stationary phase of growth
Transformation is...
DNA taken up DIRECTLYfrom environment by competent prokaryotic and eukaryotic cells

can occur after cell lysis releases a bunch of DNA
Hfr is what?
Bacterial plasmid incorporated into bacterial chromosomal DNA; may include some flanking chromosomal DNA --> transfer of plasmid and chromosomal genes
Generalized Transduction
LYTIC phage infects bacterium, cleaves up bacterial DNA, synthesizes viral proteins;

part of bacterial DNA may be incorporated into virus --> transfer when virus infects another cell
Specialized transduction
LYSOGENIC phage infects bacterium; incorporates viral DNA into bacterial chromosomal DNA. When phage DNA excised, may take some flanking bacterial genes with it.

DNA packaged into phage viral capsid and can infect another bacterium
Transposition
segment of DNA that can "jump" (excision and reincorporation) fmor one location to another

Can transfer genes form plasmid to chromosome and vice versa

excision may include some flanking DNA
genes for the following 5 bacterial toxins encoded in a lysogenic phage
ABCDE
ShigA- like toxin
Botulinum toxin (certain strains)
Cholera toxin
Diphtheria toxin
Erythrogenic toxin of step pyogenes
alpha hemolytic gram +
S. Pneumoniae (optochin sensitive, bile soluble, encapsulated)

Viridans Steptococcus (no capsule, optochin resistant, not bile soluble)
B Hemolysis
Group A = strep pyogenes (bacitracin sensitive)

Group B = strep agalactiae (bacitracian sensitive)


Group B = Strep agalactiiae
Gamma Hemolytic
Enterococcus (E. Faecalis)

Peptosteptococcus
Coagulase -, Novobiocin Sensitive
Staph epidermidis
Coagulase -, Novobiocin resistant
Staph saprophyticus
on the office Staph Retreat, there was No StRES
Novobiocin - Saprrophyticus Resistant
Epidermidis Sensitive
OVRPS
optochin - veridans resistant
pneumoniae sensitive
B-BRAS
Bacitracin - Group B (Strep Agalactiae) Resistant

Group A (Strep Pyogenes) sensitive
Enterococcus Faecalis

what does it grow in and name 3 infections of it
grows in 40% Bile, grows in 6.5% NaCl

UTI (nosocomial)
biliary tract infections
B hemolytic bacteria (4; 2 step and 1 Staph, and another)
clear ring of hemolysis

Staph Aureus
Strep Pyogenes
Step. Agalactiae
Listeria Monocytogenes
tumbling motility, meningitis in newborns, unpasteurized milk
listeria monocytogenes
What degrades H202?
Catalase
name the organism that causes:

a skin infection, organ abscesses, and pneumoniae
Staph Aureus
name the organism:

seperation of the skin between the granulosum and spinosum; presents with easily ruptured fluid filled blisters
Staph Aureus causing scalded skin syndrome

Toxic Shock Syndrome - TSST-1 toxin
What is TSST
superantigen that binds to MHC II and T-cell receptor, resulting in POLYCLONAL T-cell activation
What are 4 things that strep pneumoniae is the most common cause of?
MOPS
Meningitis
Otitis media
Pneumonia
Sinusitis
Name the virulence factor for strep pneumoniae
IgA protease
what gives you a rusty sputum?
step pneumoniae infection
what cases sepsis in sickle cell anemia?
step pneumoniae
Gram - bacteria, bacilli, strict anaerobe, normal GI flora

GI / Pelvic abscesses
BActeroides Fragiles
Large capsule, inactive LPS that does not cause shock, introduced through trauma, sx, perforation from normal GI flora
Bacteroides Fragiles

catalase +, superoxide dismutase +
Only gram - without typical endotoxin
Bacteroides
1 year old with fever, becomes drowsy (drools)
PE: neck rigidity, seizures

needs Hemin and NAD to grow
H. Influenza
cause of epiglottis, otitis media, pneumonia

systemic- meningitis, septic arthritis, cellulitis
H. Influenza type B
67 y.o., smoker
Fever, loss of appetite, HA, chest pain, dry cough
watery diarrhea

nodular infiltrates on chest X-ray
Legionella Pneumophilia
pontiac fever
flu like illness lasting 2-5 days with Legionelle infection
Visualizing Legionella
gram stains poorly, do a silver stain
Most common causes of atypical pneumonia
Mycoplasma
Legionella
Chlamydia
Viruses
infant born in rural area, severe coughing

strong characteristic cough, green phlegm, no vaccines
Bordetella Pertusis
how does pertussis bind to respiratory epithelium?
filamentous hemagglutinin (which release enterotoxins)
Tell me about the toxin: pertussis toxin
AB toxin; ADP ribosylates and inactivates Gi proteins--> increase in cAMP, lymphocytosis, decrease phagocytosis
fever that peaks after dinner, fatigue, spinal tenderness, loss of appetite, lymphadenopathy

Goat Cheese
Brucella
rising fever that climbs during the day and declines at night
Undulating fever; seen with Brucella

most commonly associated with eating Goat Cheese
What does Brucella cause?
granulomas and abscess formation, osteomyelitis
Pleomorphic, black ulcers (erythematous, tender), ipsilateral lymphadenopathy

Tick bite at rabbit farm
Francisella Tularemias
What does Francisella require for growth?
cysteine
How is francisella transmitted?
human by tickets, lice, or mites

most cases occur in Arkansas, Oklahoma, Missouri
How do you Dx francisella?
Skin test (DTH Response)
serology
cultures

has a live attenuated virus vaccine
young girl, bitten by cat--> redness, heat, induration and tenderness

local lymphadenopathy

Gram - coccobacilli with bipolar staining
Pasteurella - causes cellulitis, osteomyelitis after dog/cat bites
normal flora to dog/cat mouth, causes inflammatory response on bite --> cellulitis and osteomyelitis
PAsteurella (p.s. don't suture the wound)
What are common causes toxic shock syndrome?
tampon use, trauma/surgery introducing bacteria
skin/wound infection in neonates causes local epidermal infection that causes skin exfoliation (epidermis separates and sloughs off)
Scalded Skin syndrome

S. Aureus released a toxin
Ritter Syndrome
severe scalded syndrome when s. aureus infects umbilicus
prosthetic heart valve develops endocarditis. What is most likely to have caused it?

What is it if it develops 60 days post replacement?
Staph epidermidis

strep viridans
Yellow crusts are characteristic of what bacteria?
Strep Pyogenes
Fever, "sandpaper" rash (begins on trunk and spreads outward), "strawberry tongue" within 2 days, desquamation of palms and soles after rash subsides

previous sore throat
Scarlet fever, seen with Strep Pyogenes
Skin infections of Strep Pyogenes can cause what two complications?
1. Toxic Shock Syndrome
2. Post-streptococcal Glomerulonephritis
Name three presentations for Enterococcus Faecalis.
UTI
Biliary Tract Infection
Subacute Bacterial endocarditis
What drug are all enteroccus faecalis resistant to?
they are all resistant to cephalosporins

some are also resistant to vancomycin
Where does Staph Intermedius often colonize and why?
thrive in LOW OXYGEN areas such as Brain/ liver
Name the two toxins that B. Cereus has and how it works.
Heat-stable enterotoxin--> N/ V

Heat-labile enterotoxin (AB5 toxin)--> Increase cAMP and decrease reabsorption o NaCl-->diarrhea
Name the three components of Anthrax's toxin.
Protective Antigen (binds cell membrane and mediates entry of EF and LF)

EF - increase cAMP--> edema, non-fx PMN
LF- cell death
What is special about B. Anthracis capsule and what is it made of?
B. Anthracis is the only bacteria with a protein capsule; made of poly-D glutamic acid
What does Clostridium Tetani do to neurotransmitters?
Blocks release of inhibitory GABA and glycine from Renshaw cells interneurons

causes spastic paralysis
What does Clostridium Tetani look like?
Like a TENNIS RACKET! contains a terminal spore
How does Clostridium Tetani travel?
It travels retrogradely in axons and in the bloodstream
What is the characteristic distribution of paralysis seen in clostridium botulinum?
Decscending paralysis, starting at the head and going to etremities
What does toxin A do in clostridium difficile?

What does toxin B do?
Toxin A - causes watery diarrhea

Toxin B - causes pseudomembrane formation
how do you treat clostridium difficile?
oral metronidazole or oral vancomycin (they are not absorbed, work on intestinal bacteria)
Name three things that clostridium perfringers causes?
cellulitis
gas gangrene
food poisoning
what toxin causes the muscle cell necrosis in clostridium perfringens?
the ALPHA toxin (lecithinase)
What is characteristic of listeria monocytogenes?
Tumbling motility
What do newborns get when they are infected with Listeria on the way out?
Disseminated abscesses
Meningitis
How do you distinguish L. Monocytogenes from B hemolytic Streptococco?
L monocytogenes is Catalase +
Name two organisms that are Catalse Positive.
Listeria Monocytogenes
Staph
Gram + rod with "Chinese letter" appearance

What is it and what media do you grow it on?
Corynebacerium diptheriae

grown on Tellurite medium
What don't you do to the pseudomembranes of Corynebacterium diphtheriae?
it may cause bleeding and toxin spread
How is diptheriae toxin carried?
It's carried by a phage, so only LYSOGENIC organisms cause system disease
How is actinomyces israelli diagnosed?
filamentous branching, LACK OF ACID-FAST STAINING, SULFUR GRANULES
How do you distinguish Actinomyces from Nocardia (two ways)?
Actinomyces does not have ACID FAST staining, while Nocardia does

Actinomyces - Obligate anaerobe and has sulfur granules
Nocardia - Obligate Aerobe
Where are the abscesses of nocardia found?
Kidney and Brain
What disease does nocardia cause and in who?
it causes PNEUMONIA in IMMUNOCOMPROMISED
where is nocardia found?
in the soil
what allows nocardia to survive intracellularly?
it has a mycolic acid cell wall
How do you distinguish Nocardia and Mycoplasma?
Both are acid fast organisms due to mycolic acid

however, Nocardia has BEADED, FILAMENTOUS GROWTH
What is the classic triad seen in Wiskott Aldrich syndrome?
pyogenic infections
Thrombocytopenic purpura
Eczema

WIPE
-Wiskott
-Infections
-Purpura
-Eczema
What is the defect in Wiskott alrdrich?
X linked defect in the ability to mount IgM response to encapsulated bacteria

cytoskeletal defect
What is the classic triad seen in Wiskott Aldrich syndrome?
pyogenic infections
Thrombocytopenic purpura
Eczema

WIPE
-Wiskott
-Infections
-Purpura
-Eczema
What is the defect in Wiskott alrdrich?
X linked defect in the ability to mount IgM response to encapsulated bacteria

cytoskeletal defect