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173 Cards in this Set

  • Front
  • Back
nutrients
-all living organisms acquire nutrients from environment
electron
-a component of an atom that does not add significantly to its mass
elements contained in all living things
-nitrogen
-phosphorus
-sulfur
-carbon
covalent bond
-sharing of electrons between atoms
-strongest bond
ionic bonds
-transfer of electrons from one atom to another
molecule of water
-formed during formation of a peptide linkage
buffers
-maintain a constant pH when either acids or bases are added to them
amphipathic
-molecules that are both attracted to water and repel water
disaccharide
-which is composed of 2 glucose units
-ie. maltose
what determines if a molecule is polar, nonpolar, or ionic?
-differences in the electonegativities of the atoms of the atom
ionic bonds of sodium chloride is formed when
-chlorine gains an electron from sodium
aldeheydes and ketones are very similar in that they both contain
-C=O group
atomic number
-number of protons in an element
fatty acids
-molecules composed of hydrocarbon chain and carboxyl group
mass number
-atom determined by the sum of the number of protons and neutrons it contains
function of starch
-principle energy storage compound of plants
function of glycogen
-main storage of energy in animals
the ability of an atom to combine with other atoms is determined by
-number and distribution of electrons
how many electrons does carbon share in order to complete its valence shell? (Carbon 6)
-4
general chemical formula for carbohydrates includes the atoms
C,H,O
metabolism
-all chemical transformations and other work done in cell or organism
equilibrium
-narrow, stable range of conditions in which cells are maintained within body of an organism
hydrogen bond
-attraction between slight positive charge on a hydrogen atom and slight negative charge of nearby electronegative atoms
basic structure of a biological membrane
-consists of phospholipid bilayer, with a hydrophobic interior and hydrophillic exterior
functional group of written as -COOH
-carboxl
the reaction H--A--OH -> H-A-B--OH + H2O represents
-hydrolysis
proteins are polymers composed of
-amino acids
all proteins
-consist of 1 or more polypeptide chains
difference between DNA and RNA
-DNA consist of deoxyribose
-RNA consist of ribose
monosaccharides
-monomers that make up polymeric carbohydrates like starch
amino acids of protein keratin are arranged in an alpha helix. secondary structure is stabilized by
-hydrogen bonds
nucleotide of DNA is made up of
-base and deoxyribose sugar and phosphate
amphipathic
-molecules that are both attracted to water and repel water
condensation reaction
-protein synthesis result from them
-polysaccharide synthesis results from them
-involve covalent bond
-different condensation reaction produce different kinds of macromolecules
enzymes
-are proteins
-have specific amino acid sequence
-are highly specific
-lower the energy barier
intermediate filaments
-tough rope like filaments that stabilize cell structure and resist tension
metabolic pathways
-the product of one reaction is reactant for the next reaction
-series of enzyme-catalyzed reactions
-similar in all organisms
-are compartmentalized in eukaryotes
aquaporins
-plants and animal cells have membrane channels that allow water to pass through
peroxisomes
-collect and neutralize toxic peroxides that are formed unavoidably as side products of important cellular reactions
capsule
-surround some bacteria with outer layer of slime
cofactors
-zinc ions that bind to enzymes
phagocytosis
-process by which plasma membrane engulfs large particles or even whole cells
the difference between nucleosides and nucleotides
-only nucleotides contain phosphate group
nucleotides in RNA are connected to one another in polynucleotide chain by
-covalent bonds between bases
cytoskeleton consist of
-microtubules
-intermediate filaments
-microfilaments
primary structure
-is held by covalent bonds
-is unique to its protein
-determines the tertiary structure of the protein
-sequence of amino acids in protein
the driving force of active transport
-ATP hydrolysis
ribosomes are the structure in which
-genetic information used to make proteins
major distinction between prokaryotic and eukaryotic cell
-prokaryotic cells do not have nucleus, whereas eukaryotic does
double helix structure in DNA is overall result from
-hydrogen bonding of 2 complementary polynucleotide strands
noncompetitive inhibitor inhibits binding of a substrate to an enzyme by
-binding to an active site
bases found in DNA
-Adenine
-Thymine
-Guanine
-Cytosine
feedback inhibition
-process by which and end product acts as an inhibitor of the commitment step in metabolic pathway
chromatin is series of entangled threads composed of
-protein and DNA
binding of substrate to active site of an enzyme is
-reversible
plasma membrane of a cell
-separates the cell form its environment
-regulates what goes into and out of cell
-helps maintain constant internal environment
secondary structure
-beta pleated sheet organization in a polypeptide protein
hydrophillic regions of a membrane protein are most likely
-exposed on the surface of a membrane
quaternary structure is found in proteins
-composed of subunits
chlorolplasts are structures in which
-sunlight energy is converted into chemical energy
peptide chains have a
-N terminus end and a C terminus end
active site
-the part of the enzyme that binds with a substrate
components of endomembrane system
-rough ER
-smooth ER
-Golgi apparatus
-lysosomes
steroids such as cholesterol are synthesized by
-smooth ER
amino acids can be grouped according to the properties of their
-R groups
diffusion
-does not require ATP
-continues until molecular structure concentrations are in equilibrium
-molecules move from areas of greater concentration to areas of lesser concentration
-random process
functional roles of membrane proteins
-allowing movement of molecules that otherwise would be excluded by the lipid components of the membrane
-transferring signals from outside the cell to inside the cell
-facilitating the movement of water across membrane
-facilitating transport of macromolecules across membrane
the 5' -carbon of deoxyribose is attached to
-phosphate group
biological membranes are composed of
-lipids
-proteins
-carbohydrates
denatured protein
-protein that has become nonfunctional due to its loss of its 3-dimensional structure
allosteric inhibitor
-changes shape of an enzyme
the enzyme sucrase increases the rate at which sucrose is broken down into glucose and fructose. Sucrose works by
-lowering activation energy of the reaction
involve the uptake of material into the cell
-pinocytosis
-endocytosis
-receptor-mediated endocytosis
-phagocytosis
a nucleotide in DNA is made up of
-sugar plus a phosphate
when placed in hypertonic solutions, animal cells
-shrink
rate at which substance diffuses is affected by
-diameter of molecules or ions
-temperature of solution
-concentration gradient in system
lysosomes are important in eukaryotic cells because they contain
-digestive enzymes
rough ER is the portion of the ER that
-has ribosomes attached to it
amino acids can be classified by
-characteristics of side chains
when a severely dehydrated patient is brought to the hospital, and IV of normal saline is started immediately, distilled water is not used because
-it would cause the patient's blood cells to swell and eventually burst
paracrine signals
-signals that bind to receptors on nearby cells
signal ligands can be divided into 2 general classes according to their receptors. which of the following are 2 kinds of receptors ?
-plasma membrane and cytoplasmic
if G protein were unable to release its bound nucleotide but could hydrolyze it, signal transduction would
-stop
if all the lysosomes within cell suddenly ruptured, what would be the most likely result?
-macromolecules in the cytosol would break down
function of NAD+
-carry hydrogen atoms and free energy from compounds being oxidized, and to give hydrogen atoms and free energy to compounds being reduced
when a molecule loses hydrogen atoms, it becomes
-oxidized
transmembrane protein
-protein that forms an ion channel through a membrane
ribosomes are found in
-prokayotic cells
-rough ER
-chloroplasts
-mitochondria
cell signaling causes
-change in receptor conformation
signals that bind to receptors of the same cell that made them are known as
-autocrine signals
triploid plants
-3 times the chance of surviving that a monoploid has
during glycolysis, for each mole of glucose oxidized to pyruvate
-2 mol of ATP are produced
a typical eukaryotic cell cycle consist of
interphase, mitosis, cytokinesis
during the fermentation of one molecule of glucose, the net production of ATP is
-2 molecules
in an organism with a diploid number of 8
-a gamete has 4 chromosomes
-a liver cell has 8 chromosomes
-sperm cell at meiotic anaphase I has 8 chromosomes
during the first step of the citric acid cycle, energy stored in acetyl CoA is used to
-drive the reaction oxaloacetate -> citric acid
sexual reproduction increases variability through
-crossing over,independent assortment, and random fertilization
down syndrome is diagnosed by means of an examination of individual's
-karyotype
the component of aerobic respiration that produces most ATP per mole of glucose is
-electron transport chain
molecules that make up chromosome are
DNA and proteins
paracrine signals
-signals that bind to receptors on nearby cells
electron transport chain contains 4 large protein complexes. these proteins are
-embedded in inner membrane of mitochondrion
in complete oxidation of glucose, 6 CO2 molecules are formed per glucose oxidized. the numbers of CO2 molecules released by glycolysis, citric acid cycle, and pyruvate oxidation.
-0 glycolysis
-4 citric acid cycle
-2 pyruvate oxidation
nondisjunctions
-accidents during meiosis that can result in trisomies and monosomies
receptors
-specific to signal ligands
a drug destroys the proton gradient across the inner mitochondrial membrane. what would be the effect of incubating isolated mitochondria in a solution of that medicine?
-no ATP would be made during transport of electrons down the respiratory chain
members of a homologous pair of chromosomes
-identical in size and appearance
receptor
-next component of signal transduction pathway, after signal itself
asexual reproduction produces identical individuals because
-no meiosis or fertilization takes place
haploid cell
-containing only one copy of each chromosome
phases of cell cycle part of interphase
-G1, S, G2
yeast cells tend to create anaerobic conditions and therefore
-produce ethanol
suppose that you add cyanide to suspension of muscle cells from a rat. what effects on glucose catabolism
-citric acid cycle and glycolysis would be stimulated
glycolysis
-in all cells
-starts glucose metabolism
electron transport chain
-electrons are received from NADH and FADH2
-terminal electrons acceptor is usually oxygen
-most enzymes are part of inner mitochondrial membrane
-electrons are passed from donor to recipient carrier molecules in series
in plant cells, cytokinesis is accomplished by formation of
-cell plate
acetylcholine
-binds strongly to acetylcholine receptor
compared with fermentation the aerobic pathways of glucose metabolism produce
-more ATP
fermentation
-does not require O2
pyruvate
-end product of glycolysis
-becomes reduced during fermentation
-contains 3 atoms
-is percursor of acetyl CoA
binary fission
-bacterial cell gives rise to two genetically identical daughter cell
human muscle cells, fermentation process produces
-lactic acid
krebs cycle
-pathway that occurs in mitochondrial matrix of eukaryotes
oxidation
-loss of electron by ferrous ion to yield ferric ion
homolog
-one pair of chromosome with same genetic composition and sequence
passing of electrons through series of protein molecules is called
-electron transport chain
glycogenesis
-formation of glucose from glycolytic and citric acid intermediates
meiosis
-process that ensures that only one of each pair of chromosomes is included in a gamete
karyotype
-number, form, and type of chromosome found in cell
during alcoholic fermentation, NAD+ is regenerated by reduction of acetaldehyde to
-ethanol alcohol
in general, the division of cell, that follows immediately after mitosis
-cytokinesis
replication of DNA
-S phase
cytokinesis
-m phase
occurs right before prophase
-G2
segregation of DNA
-M phase
includes G1 and G2
-interphase
transcription is the process by which
-RNA molecule is synthesized from DNA template
required for transcription
-DNA template
-RNA polymerase
-nucleoside triphosphates
strand of DNA with sequence 5'-ATTCCG-3' would have complimentary strand with sequence
-3'-CGGAAT-5'
DNA polymerase lengthens polynucleotide strand by
-covalently linking new nucleotides to previously existing strand
rules formulated by Erwin Chargaff
-A=T and G=C in any molecule of DNA
point mutation
-type of mutation that consists of the insertion or deletion of single base in coding region of proteins
correct order in excision repair of DNA
-damaged bases are recognized
-part of single strand is excised
-DNA polymerase 1 adds correct bases by 5' to 3' replication
-DNA ligase seals new strand to existing DNA
role of DNA ligase in DNA replication is to
-bond Okazaki fragments to one another
a template of DNA strand has base sequence : 3'-GTC...CCA-5', what would be the sequence of the corresponding mRNA?
-5'-CAG...GGU-3'
single base changes in coding regions of proteins can cause what type of mutation?
-missense
-nonsense
-frame-shift
-silent
constitutive gene
-expressed in most cell types at fairly constant level
-ie. actin
UGU and UGC both code for cysteine. A change from UGU to UGC would thus be
-silent mutation
act in opposite ways
-repressor and activator
first repair of mistakes during DNA replication is made by
-DNA polymerase
a virus-encoded protein called TAT is
-protein used by HIV to evade host cell defenses
enzyme DNA ligase is required continuously during DNA replication because
-fragments of lagging strand must be joined together
stands that make up DNA are antiparallel
-the 5' to 3' direction of one strand is counter to 5' to 3' direction of other strand
flow of genetic information
-DNA encodes information that is translated in RNA, and RNA encodes information that is translated into proteins
potential points of regulation of gene expression
-level of transcription
-level of processing mRNA
-level of mRNA stability
-level of translation
mutations
-changes of nucleotide sequence of DNA that is passed on from one organism to another
during replication the new DNA strand is synthesized
-in both the 3' to 5' and 5' to 3' direction from replication fork
RNA polymerase is a
-protein
semiconservative replication of DNA involves
-each original strand acting as template for new strand
translation
-process by which information in nucleic acid sequence is used to direct production of specific chain of amino acids
order of charged tRNA molecule move between 3 sites on ribosome
-A,P,E
3 codon in genetic code that specify amino acids are called
-missense
-start
-promoters
-initiator
mRNA
-molecules involve in transfer of genetic information from nucleus to cytoplasm
tRNA
-any particular tRNA binds to one and only one amino acid
-bind physically to mRNA
-interacts with ribosomes
termination of transcription involves
-terminator sequence
anticodon 3'-AUC-5' would pair with codon
-5'-UAG-3'
involved in elongation step of translation
-peptide transferase
-charged tRNA
-ribosomes
-amino acid site
which molecule transfers information from mRNA to protein?
-tRNA
when a eukaryotic polypeptide is being produced, the first amino acid is always
-AUG
telomeres
-repetitive sequence at end of many chomosomes
elongation
-process within transcription that occurs after initiation
pre-mRNA is modified into mature mRNA by addition of what at the 5' end and what at the 3' end
-G cap
-A tail
modification also includes RNA splicing. what is removed
-introns