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11 Cards in this Set

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Is there any difference between protein precipitation and protein denaturation? If there is any, what is it?

YES! Protein denaturation is loss of function/activity and precipitation is loss of protein solubility.

List three chemicals or experimental circumstances, which can cleave disulfide bonds responsible for 3D structure of proteins.

1. Mercaptoethanol


2. dithiothreitol (DIT)


3. Dithioerythritol (DTE)

List three chemicals or experimental circumstances, which can cleave salt linkages responsible for 3D structure of proteins.

1. Heat


2. extreme pH


3. high salt concentration

List three chemicals or experimental circumstances, which can cleave hydrogen bonds responsible for 3D structure of proteins.

1. Urea


2. extreme pH


3. Heat

List three chemicals or experimental circumstances, which can cleave hydrophobic bonds responsible for 3D structure of proteins.

1. Organic solvents (alcohol, acetane)


2. Urea


3. Detergents

What will happen to intracellular proteins after a moderate and an intense heat shock respectively? What kind of proteins/polypeptides are activated in the first and in the second case?

Moderate: Preserve activity of protein


Intense: Loss of function and structure

Name th(os)e protein(s) whose misfolding may be associated with Parkinson’s disease.

alpha-synuclein

Name th(os)e protein(s) whose misfolding may be associated with Alzheimer’s disease.

amyloid-Beta


tau

Name th(os)e protein(s) whose misfolding may be associated with cystic fibrosis.

membrane bound protein: cystic fibrosis transmembrane conductance regulator (CFTR)

What is the role of the enzyme in the case of enzymatic activity measurement and during enzymatic analysis, respectively?

In the case of enzymatic activity: the time is important, since umol/min



during enzymatic analysis: time is not important since the determined parameter is the amount of substrate umol

Name four enzymatic reactions with direct ammonia release in mammals.

glutaminase,


glutamate dehydrogenase,


glycin cleavage enzyme,


serin hydratase