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112 Cards in this Set

  • Front
  • Back
biosphere collapse
biodiversity loss, loss of pollinators, poor crop production (loss plant species)
rich organic soil decomposed, O consumption, drop in atmospheric O
Ecosystem concept
living things connected with environment, dependent on surroundings (modifies)
energy flow/matter link living things with physical environment
ecosystem=all organisms/abiotic factors in environment
Ecosystem size
entire planet
catchment boundaries from continental (amazon) to local (forest)
Trophic levels
food web, ecosystem structure
food chain consist of trophic levels

radiation absorbtion-photosynthesis-predation-decomposition-nutrient uptake-transpiration
Ecosystem influences. 2 types
states factors
interactive controls
State factors
climate dominant factor (dtermines biomes)
parent material (influences soil)
topography (controls hydrology, micro climate, soil development)
interactive controls
resources (energy, material used by organisms)
Modulators (physical/chemical properties) e.g temp, pH
disturbances (fire, floods)


Feedback
+ve (push ecosystems to change)
-ve (resist change)

How to study
compare ecosystem which differ in potential biota
altitudinal transect
Soil geology
thin film over earths surface, geological/biological process interact
within climate region, soils control ecosystem processes

Soil, multiphasic system
consists of: organic remains, clay, rock, liquids and gases
solids are 50% of volume
source of water/nutrients for plants/microbes
physcial vegetation support system
medium for decomposer organisms
Rock cycles
mountains are weather, rocks are crushed into sediments
sediment move into crush, changed
plate collision moves mountains back up
Climate, in soil formation
temp/moisture influence rock weathering rates
influences development of rocks in soils
Time
newly exposed geologic substrate has more phosphorus
more phosphorus, more organic material
over time, more phosphorus absorbed into unavailable forms
old soils, less fertile
Soil loss
dependent on deposition, erosion and development
balance is needed
Erosion
0.1-1mm over 1000 years
variable (steep terrain, high rainfall, lack of vegetation)
effects:
young soils-reduces soil fertility (removes clay/organic matter)
old-renews fertility (removes weathered remnants, exposes new nutirents)
Profiles, develop through:
addition-precipitation, organic matter
transformations/transfers-humus, hydrous oxides, clays, ions
losses-lions, silica
Weathering
physical: fragmentation, tectonic, abrasion, freeze thaw, roots, fire
chemical: acidic/oxidation, dissolved, carbonic acid
weathering of primary materials produce secondary materials
Leeching
vertical layering of soils
downward movement of dissolved minerals, particulate transfer in water

Soil profiles
O horizon-organic material, litter of dead organisms
A horizon-uppermost mineral level, organic matter
E horizon- maximum leeching
B horizon-iron/aluminium accumulation
C horizon-unweathered parent material
R-bedrock
types:
temperate deciduous
coniferous forest
grassland
tropical rainforest
desert
Soil modulates
water/nutrient availability/cycling
texture is key component

Soil texture
% of sand, slit and clay
different textures determine water saturation level
Soil water
water saturated-all pores filled with water
drains under gravity
field capacity-water no longer freely drains
permanent wilting point-water no longer moves
water holding capacity-difference between field capacity and permanent wilting point
Organic matter
dead organism material
determines soil development, water holding capacity, nutrient retention
food for heterotrophic organisms

Global energy balance
earths temp varies, keeping energy flow balanced
differences in latitudinal variation and seasons
Atmospheric circulation
air rises at ITCZ (equator)
N or S 30%, forms hadley cell
Polar air falls towards equator, meets warmer air
returns to poles (polar cell)
remains (ferrell cell)
coriolis effect-easterlies in tropics, westerlies at mid-latitudes
Precipitation
greatest with rising air, onshore winds
Temp
greatest over summer months
topography
rainfall higher on sea side of mountains

Land cover
albedo effect (reflectivity):
oceans-low
snow/ice-high
vegetation-medium
soil-dependent on wetness
Evapotranspiration:
trees transpire ore than grass
Climate change
dependent on solar input (shorter timescale)
changes in eccentricity of orbit
season length
angle of earths axis to sun
Distribution of biomes is related to changes in earths climate
predict climate changes, predict biome changes
higher precipitation and temp, richer biome
Major biomes:
equator-moist rainforest, dry tropical woodland, dry forest
mid latitudes-warm temperate, cool temperate, mediterranean
high latitudes-boreal, sub arctic, arctic
Water
high specific heat capacity, slow temp change
states change, considerable energy
water held in air increases with temp

Solar radiation budget
balance between incoming/outgoing radiation
Rnet=(Kin-Kout)+(Lin-Lout)
K-shortwave
L-longwave
ecosystem radiation budget
energy partitioning-ecosystem energy absorbed balanced by energy released (soil, atmosphere)
Partitioning controls
Water budgets-soil filled by precipitation, emptied by evapotranspiration, runoff and drainage
Water movement
water cycle replace water across ecosystem
speed dependent on soil (hydraulic conductivity) and path length
Transpiration
water moves from high to low potential energy
low partial water pressure in air, loss of water through stomata
replaced by uptake from roots
Root depth
compromise between water and nutrient availability
most roots in surface
longer lived plants, deeper roots
Water flow influences
land use (deforestation)
annual rainfall
soil composition

Nutrients
absorbed by plants, returned by decomposition
energy cannot by created or destroyed, only recycled
matter is recycled
pulses (autumn falling leaves, wet season)
Nutrients
inorganic:
atmospheres, lithosphere, hydrosphere
organic:
C (organic compounds), N (protein), P (ATP)
Inputs
Rock weathering- (Ca, Fe, Mg, P, K)
Atmospheric- (fixing, N and C), wet/dry deposition
Streamwater- flooding
Nutrient rentention
determined by clay and humus content, -ve charge of cations provides attraction
higher acidity, lower charger, lower fertility

N fixation
reduction of N catalysed by nitrogenase
16 ATP, one N triple bond
bacterium need abundant carbohydrate supply
must be anaerobic, O denatures
Outputs
loss to atmosphere:
respiration, methanogenesis, denitrification, fire
Dissolved in stream flow:
most nutrients soluble in water
Specific minerals:
N-atmosphere
P, K, Ca etc-rocks
S-atmosphere/rocks

Phosphorus
not in atmosphere
released by weathering, closely linked with soil pH
in lakes, held within plankton. dependent on predation rates
soluble at low/high pH
Nutrient uptake
plants prioritsie certian nutrients in lower abundance
P and N must remain in balance
differences:
nutrient input, plant traits (root length/activity)

Mycorrhizae
symbiotic relationships between plants and fungal hypahe
nutrient exchange
increases root absorbance ability

Nutrient use
tissue production (leaves, roots etc)
areas used for metabolism prioritised, nutrients are used up

Nutrient use efficiency NUE
net primary productivity/nutrient uptake
best where nutrient are limited
plants are better at making biomass per unit of nutrient
low nutrients
low tissue turnover, high NUE, long persistence
dry, infertile, shaded
stress tolerators
high nutrients
high resource capture, rapid growth, rapid tissue turnover, low NUE
fierce competitors
Human inpacts
C cycle, carbon dioxide released into atmosphere
N cycle, artificial fixation, fertilizers
land use, fire, clearance, industry
C linked with N
Primary productivity-organic compounds from inorganic carbon (autotrophs)
2 types, photoautotrophs and chemoautotrophs


Photoautotrophs-photosynthesis
solar radiation-use mostly visible sepctrum, transmit green light so appear green
greater light intensity, great photosynthesis rate
up to overheating point
intensity unpredictable (season, clouds)
leaf structure/shape changes, grow to suit light intensity
water
loose soils, easy to absorb. roots non-branched
dense soils, vice versa
water lost through leaves (stomata)
in dry areas, plants are tolerators (slow) or avoiders (non until water present)
minerals-required by plants
N, P, S, K
trace Ca, Mg, Fe and others
carbon-taken in through stomata
variable conc (over time, daily, seasonally, spatially)

Chemosynthesis-organic matter created by oxidation of inorganic molecules
1.energy source (electron donor)-nitrites, ammonium, ferrous ion
2.oxygen source-water/O
3.inorganic carbon

Light reaction-light energy converted, stored as chemical energy (ATP, NADH)
occurs in chloroplasts
ATP/NADH-formed outside thylakoid, provide energy/electron to make sugar


Dark reactions-calvin cycle
3 carbon sugar from 3 carbon dioxide
3 phases-carbon fixation, reduction (ATP/NADH), regeneration
produces 3x 5C sugar (RuBP)
requires 9 ATP/6 NADH
most plants use only Calvin cycle (C3)
dark reaction-photosynthesis
high carbon dioxide, moderate conditions
very water wasteful
problem-photorespiration (no new carbon fixed, O produced, energy wasted) bad in dry climates

C4-light/dark reactions separate
carbon intake separte from calvin cycle, stromata can close more often
betetr for hot/dry environments, more energy
Chemosynthesis-all dark reactions
hydrogen sulphide starting material
ATP/NADH, same formation as in photosynthesis, electrons and hydrogen
sulphur is end product

Primary productivity-essential for all life
plants are producers, eaten by herbivores
gross primary productivity (GPP)-amount of light energy stored as chemical
net primary producitvity (NPP)-amount of energy available to next trophic level. NPP=GPP-R
Hererotrophs-feeds on others
requires, water, minerals, oxygen, organic carbon

Herbivores-eats tissue/internal fluids of living plants/algae
very divers, many different plants so many different animals
frugivores-fruit eater
very rich in sugar, not much else
vast quantities required to get nutrients
terrestrial-where fruit is
birds, mammals, rare amphibians/fish
insects/fungi
folivores-leaf eater
carbohydrate rich, with fibre, protein and minerals
very complex, difficult digestion
extremely common
rare in birds (heavy digestive system, limits flight)
Nectarivores-nectar drinker
very sugar rich, high fluid, some protein
Mucivores-sap drinker
xylem (water), high fluid content, little energy
phloem (sugars), sugar rich, little minerals
Granivores-seed eater
carbohydrate rich (starch), protein/fat rich
hard/well defended
very common insect, mammals, birds
Palynivores-pollen eater
protein rich, carbohydrates, some fats
tough exine coat
usually invertebrates

Xylivores-wood eater
very desne, cellulose, lignin etc
very difficult to digest
usually fungi, smaller animals

Algivores-algae eater
richer in protein and minerals than terrestrial plants, plus less cellulose
mostly aquatic
Herbivore efficency
often inefficent, plants have indigestable cellulose
requires-long digestive tract, grinding process, selective of material, gut bacteria, coprophagy (faeces eating)
Plant material-low on protein, high on carbohydrate
rid off carbon, high metabolism
excess water, high excretion rate

Access to materials
plants defend leaves, fruits, seeds
often seasonal and plentiful
differs in latitudinal regions
hard to reach, sap, seeds
Overcoming defences
physical, chemical
strategies-behavioural, physiological
Geophagy-supplement diet with external minerals
Heterotophs-predation
consume living organisms to survive and grow
4 broad concepts
grazers, true predators, parasites, parasitoids
grazers-remove and consume only part of prey, not certain death. many prey over lifetime
usually herbivores, not entirely

True predators-consume prey in entirety, prey is killed. many prey over lifetime
usually carnivores-sharp, tearing mouthparts
some plants
Parasites-eat only part of another organisms, rarely death. one/few organisms in lifetime
plant on plant, animal on plant, animal on animal
common in microorganisms, fungi

Parasitoids-intimately associated with prey (parasties), eats parts of prey without immediate death (grazer) but death inevitable (predators)

Eating the dead
coprophages-eat faeces of other animals
usually of herbivores
flies, fungi, bacteria
very important for recycling

Saprophages-eat non-living material, can be selective
true decomposers
Decomposers-sall scale breakdown of organic matter in organic nutrients
happens extracellulary, secrete digestive enzymes
simple matter than absorbed

Detritivores-animals ingest macroscopic particles
usually very small
eat leaf litter etc
hard crushing mouthparts
Scavengers-feed on recently dead organisms
similar to true predators, mouth parts etc
can detect carrion from great distances

Efficiency
assimilation-% ingested material usable by organism
production-% of assimilation energy incorporated into biomass
consumption-% total productivity consumed by next trophic level
heterotroph defences
physical-horns, spines etc. camoflague, mimicry. being large, fast
chemical-poison, produced by heterotroph, accompanied by warning, sprays
behavioural- hiding, mobbing, running, alarms/distraction

Overcoming defences
be bigger, faster, stronger, greater numbers
resistance, sequesting (chemical)
tool use

Foraging-general vs specialist
animals are opportunists
general-all food types
specialist-few food types, specific prey species
finding food requires: finding it (time), catching, subduing

Optimal foraging-to eat or not to eat
value of food item, ignore poor quality unless food items are low

Physiology ecology-how animals function in and respond to their physical environment, at all life stages
find optimum environment, range
eurytopic-wide range
stenotopic-small range
Dealing with environment
avoid-behavioural/developmental to avoid change
tolerate- confrom, regulate
Tolerate
acclimatization-reversible changes, maintain function of organism under changing conditions (short term)
adaptation-natural selection adjusts traits to improve fitness (long)
stress-environmental change forces organisms tolerance
water balance-essential, universal solvent
60-90% of animal body mass
balance between water and solutes (osmotic potential)
iso-osmotic-conc of water/solute same as environment
hypo-osmotic-more water outside
hyper-osmotic-more water inside
HWC to LWC
Maintain water balance-ocean (more water inside)
less permeable skin
drink seawater
pump out solutes, urine, salt glands


Estuary/tidal
impermeable coating
storing water
burrow/hide (behaviourable)
Freshwater (more water outside)
impermeable skin
no drinking
solute from food, active uptake
urine, very hypotonic


Terrestrial
damp/humid environment
nocturnal
decrease skin permeability

take in water (drinking, food, dew, osmotic)
metabolism produces water
water vapour
Thermoregulation-thermal exchange
transferred by:
conduction (direct molecule contact), depends on temp gradient, contact area, conductive properties


Convection-mass movement of intervening fluid
natural or forced
depends on: temp gradient, dimensions, fluid properties
Radiation-heat transfer without direct contact
depends on: object temp (higher temp, greatly increased radiation)
Evaporation-dissipation of heat due to high energy cost of water change of state
depends on: object temp, water vapour density
not available to aquatic animals, limited water
Thermal strategies
2 types, endo and ectotherms
endotherm-energy exchange with environment
ectotherm-internal metabolic processes
consatnt body temp must be a balance
Keeping warm
activity-metabolis raised.
shivering- involuntary muscle movement, high energy, little movement
thermogenesis-fat burned, produces heat
insulation
subcutaneous fat
behavioural-posture, microclimate, huddling
Keeping cool
find shade, underground
increase heat exchange (surface area)
increase evaporation (sweating, panting)
behavioural (dormancy, migration)
Ethology-study of animal behaviour
Proximate causes: what causes animal to do something (mechanisms?), behaviour development
Ultimate causes: function of behaviour why its adaptive, how did behaviour evolve
Perceiving environment-receiving info about internal condition/external environment


Chemoreception-receptor detects/identifies chemical substances (inter/exteroceptors)
taste and smell
Thermoreception
hot/cold temperatures
external-environmental changes
internal-animals thermostat
Electromagnetic
electromagnetic radiation
sight, visible spectrum varies between species
infrared, UV, even magnetic fields
Electroreception
electrical impulses
only possible in water, weak signals conducted
Mechanoreception
changes in pressure, position or acceleration
balance, touch, hearing
Lateral line system-disturbance of water pressure, used to detect prey etc
Orientation
Kinesis-animals response proportional to stimulus intensity, non directional
Taxis-movement directly towards/away from stimulus (+ve or -ve)

Navigation-moves from one place to another, goal orientated manner
Pilotage-using familiar landmars
Compass orientation-particular compass direction
True-towards a goal using some form of map
Communication-'actors' use specially designed signals/displays to modify behaviour of 'reactors'
several methods: chemical, visual, acoustic, electrical, tactile
can communicate: environmental info, sexual, parental care, social

intraspecific interactions- group living (solitary, gregarious, transient)
predation-large number, greater number mean great vigilance, dilution effect, confusion effect, group defence
feeding- greater numbers, find food quicker, greater chance catching prey
reproduction-big groups, easier to find. cooperative breeding
Life cycles-all organisms have a cycle
either haploid or diploid
Animals: direct development-born/hatches as juvenile. grows before reproduction
Indirect-egg to larvae/metamorphosis to adult (two distinct stages, dramatic transformation)
Reproduction
asexual-binary fission (copy and split), vegetation propagation, budding, fragmentation, parthenogenesis

Sexual-gametes, haploid cells fuse into individual
anisogamy-M/F decided by gamete size
semelparous-reproduce once and die
semelparity-overlapping generations
iteroparous-reproduce multiple times (can be seaosnal/random)
Life history theory-pattern of lifetime growth, development, reproduction and survival
r species: short life, rapid maturation, explosive reproduction (unstable environments, new areas)
K species: long life, delayed maturation, slow reproduction (resource competition, stable environments)
Resource allocation
activities require resources, not unlimited
allocation to one trait, cannot allocate to another trait
animals must choose
How many offspring
fitness measured by number of offspring that survive to reproduce
clutch size, tradeoff between fecundity and survival
optimum size should be intermediate number
Hierarchy of ecology
1.environment
2.organism
3.population
4.community
5.ecosystem
Population-group of individuals of same species, particular area at the same time, interact with each other
Individual-single organism capable of independent existence
modular organism: genet (genetic), ramet (physiological) individuals
Group
population size-how many individuals
density-no. individuals per unit area
populations are dynamic (changing)
Distribution
determined by abiotic/biotic/historical factors
no organism has global distribution
abundance-how many individuals in given area
Dispersal-movement of organisms away from each other
NOT dispersion-spatial arrangement of individuals in population
plants: animal, water/air current, exploding, larval
natal dispersal: leaving birth area (avoid competition, dominant individuals, inbreeding, colonize new areas)
Dispersions-spatial arrangement of individuals in population
Clumped (aggregated): close proximity to conspecifics
Regular: uniformly spaced throughout environment, usually from intraspecific interactions
Random: individual in one spot as likely as any other, all areas have correct environmental requirements
scale very important
Population growth
geometric growth: changes by fixed proportion from one discrete time period to another. reproduction events must be synchronous, on fixed schedule
Nt = N0 * λt
λ <1: pop decreases
λ=1: stable
λ >1: increases

Exponential growth
dN/dt=rN
change in pop size/change in time
exponential growth rate
starting pop size
Nt = N0 ert
r>0, increases
r=0, stable
r<0, decreases
Growth
BIDE model
B-births
I-immigration
D-deaths
E-emmigration
Regulation
density independent factors: effect regardless of density, doesnt effect growth rate, results in decrease (floods, tsunami, volcanoes, meteors etc)
density dependent: population changes becuae of individual density
high density= lower birth/immigration, higher death/emmigration
low density=higher birth/immigration, lower death/emmigration
regulate population size (space, food, water)
Logistic growth
low density-growth rate high, size increases quickly
density increases- resources depleted, growth slows and stops (carry capacity)
dN/dt=rN(K-N/K)
delayed density dependence-fluctuate around carry capacity, time lags
predators have longer life span
reproduction no instantaneous
r/time lag low-logistical growth
r/time lag intermediate-damped oscillations
r/time lag high-stable limit cycle
Life tables
age-not all individuals have same survival chance/reproductive potential
cohort: individuals all born in given time period
two section-survival/reproductive data
most accurate, however requires cohort (difficult with short/long lived, stationary/wide ranging)
Static life tables-data from a fixed point
must be able to estimate age, assume survival/reproduction constant
Composite life tables-averages data over several periods
+ve: doesnt require cohort, averages give reliable survival/reproduction
-ve: hides fluctuations
Stage based life tables-age, survival, reproduction arent linked
life stages not time periods
Survival/mortality curves
type 1: stable survival rate, drops off 2/3rds through life (humans, large predators)
type 2: linear decreasing chance of survival
type 3: rapid decrease in young life, very few old organisms
can vary with populations, sexes, cohorts
Morality-m=each corresponds to survivorship curve
type 1: low chance when young, increasing exponentially 2/3 through life
type 2: stable, constant chance of death throughout life
type 3: increases exponentially when young, stabilises at high point. few old organisms
Age structure-proportion of population in each age class
population growth can be predicted from life tables/age structure
Population extinction-growth rate can change with environmental changes
deterministic changes: predictable changes, consistently reduce growth rate
Stochastic variation: unpredictable changes (environmental or demographic). not bad for large populations
Allee effects: at low populations density, small populations can decrease past point of return (hard to find mates, higher predation, harder to get food)
Applied ecology-application of ecology concepts, theories, models, methods providing basis to address real world management, conservation issues

Counting organisms
often difficult-small/camoflaged, wide ranging/fast moving
absolute pop size: estimates actual abundance of individuals (+ve more accurate, -ve time consuming, expensive)
relative pop size: should relate to actual abundance, allows comparison between individuals numbers relative to one another (+ve cheap/quick, -ve misleading)
tradeoff between precision/significance
Estimating abundance
area based counts: smaller 'sample area', estimate total pop size based on total area (works on averages, quadrats)
absolute pop size for: plants/sessile, slow moving
relative: mobile, cryptic animals
Distance methods-distance organisms are from given point, estimate pop size. calculate density
detection function can correct estimates
same as area based, good for plants/sessile

Mark recapture-mark animals, release and recapture. % marked animals recaptured, estimate pop size
good for mobile animals
some assumptions: no pop change during capture period, equal catch chance for individuals, marking has no effect, marks remain during sampling
Uses
conservations: is pop declining, area most important to save, is conservation strategy working, cause of pop change
Population viability analysis (PVA)-mathematical process/tool set estimate probability that population will persist within time period under current conditions
incorporates chance events (environmental/demographic)

PVA uses: pop size for reserve, no. of populations needed for regional persistence, identify key life stages for conservation/pest control, sustainable harvest limits, no. of individuals to release in introduction
Sustainable harvest limits: no. individuals that can be removed without risking population
1/2K maximum sustainable yield
fixed quota-same number each year
fixed effort: maintain constant harvest effort, no removed changes with pop size
Interspecific interactions
predation, amensalism (one species destroyed, other unaffected), competition
Competition
resources- one will limit ability to grow, reproduce or survive
consumed by organisms, can be depleted
can also be services
environmental features: salinity, temp, pH, oxygen (physical factors)
Types of competition
Exploitation-one species uses a resource that would otherwise be used by another species
interference-species compete directly for access to resource they both require
asymmetric competition (one species more harmed in competition than the other)
Competitive exclusion principle
if two species use same limiting resource, cannot exist indefinitely (extinction for one species)
two species in same stable environment, resource not used in same way
greater difference, easier to coexist
Resource partitioning-species divide up resource so each species limited by different factor
can feed in different areas/ways, diverge in morphology/behaviour
Modelling competition
equation involving 2 species is derived from logistic equation
4 possible outcomes: (k is limited resource)
1. species 1 higher k, more competitive
2. species 2 higher K, more competitive
3. high interspecific, low intraspecific
4.low interspecific, high intraspecific
Commensalism-two species where on benefits and one does not benefit but isnt harmed
problems: there may be hidden effect, absence of evidence isnt evidence of absence
lack of effect ay depend on density
Mutualism-two species where both species gain benefit from being together. not selfless or without cost, simple NET gain
obligate mutualism-species specific, neither can survive without the other
facultative-not species specific, can survive alone
symbiosis-two species live in close/direct physical contact
ephemeral-loosely associated

Characteristics of mutualism
trophic benefits: +ve interaction, one species receives energy/nutrients from another (Mycorrhiza)
defence: +ve, one species provides protection/shelter
service: +ve, one species provides service
Mullerian mimicry-poisonous species has unpoisonous copy
species dont directly interact, by product of direct benefit. common use of beneficial strategy
Issues with Mutualism
assumptions about interactions
species cheating-simply taking without reciprocating
mutualism can result in runaway population growth of both species up to point. too far, one species will drop off
Ecological community-collection of organisms found inhabiting defined area
number of species present, diversity measure, relative abundance
Niches-summary of organisms tolerances and requirements
each habitat, many niches
describes how, not just where an organism lives
organism tolerances
temp, relative humidity, pH, wind speed, water flow, day light, recipitation
real niche of species must be mulitdimensional
n-dimensional hypervolume
all factors are considered to provide a niche
fundamental niche-overall potential niche of a species, allowing viable population (no competitors)
realised niche-more limited spectrum of conditions/resources allowing species to persist
realised (narrower) within fundamental, interspecific competition
Competition occurs between similar species in similar niches
coexistence of species requires interspecific competition to be less than intraspecific

niche differentation
requires: resource partitioning-utilize different resources within same habitat
separate in space, time, morphology or ability
Niche construction-organism through activities/choices modifies own/others niche
tends to increase fitness, good for natural selection
consequences: broader effects on other species/ecosystem, likely to effect own natural selection pressures

community-assemblage of species populations occur together at same time
usually defined by physical/biological characteristics
members classified by: taxonomic affinity, guild (group of species use same resource), functional groups (function in similar ways, dont use same resources)
trophic webs
community structure- set of characteristics shape a community
species richness: no species in community, measured with species accumulation curve
species evenness: relative abundance (commonness and rarity)
species diversity: combines richness and evenness, shannon diversity index
Biodiversity-25 hot spots around earth
incorporates richness and diversity, can be measured from genes to communities
biogeography-study of species composition/variation across geographic locations
species area curves
Island biogeography
1. no species dependent on balance between immigration/extinction
2.balance is dynamic
3.vary with island size/isolation
richness depends on island: degree isolation, time, size, habitat suitability, ocean currents, human activity
Disharmony-relative proportions of different taxa not same as on mainland
assmebly rules-patterns in developing/establishing communities
only certain combinations of species are possible, these resist invaders
stable combinations may be unstable in other locations
Trophic levels-position organism occupies in food web. Based on feeding relationships
Food chain: chains of animals linked together by food, all dependent upon plants
energy flows up
1.primary producers (autotrophs)
generate chemical energy from sunlight (inorganic chemical compounds)
plants, algae etc
usually photosynthesis
detritivores: consume dead organic material
Primary porducers (heterotrophs)
detritivores: consume dead organic material
releases nutrients, supply would be quickly exhausted without them
2.Primary consumers- herbivores
consume primary producers (autotrophs) to obtain energy
both invertebrates and vertebrates
3. Secondary consumers (primary carnivores)
consume primary consumers
smaller predators
4.tertiary consumers- secondary carnivores
consume secondary carnivores
larger predators, usually vertebrates

some omnivores have feeding links across multiple trophic levels
Energy flow
created at bottom level by autotrophs, flows up
some lost at each level, biomass and entropy
net energy decrease, final consumers dies becomes detritus
only small fraction of sunlight fixed by autotrophs
trophic efficency-energy passed onto next level, depends on consumption, assimilation, production
Consumption efficiency (CE): proportion of available energy digested
assimilation (AE): proportion ingested food assimilated via digestion
production (PE): proportion assimilated food goes towards producing new biomass
TE=CExAExPE
Food webs-feeding relationship amoung organisms in all/part of community/ecosystem
Nodes: single species
Links: between nodes, show predator/prey relationship (undirected vs directed)
trophic position: nodes distinguished as basal, intermediate or top predators

Types:
source webs- species arising from single food source
sink webs- linked by one top predator
community web- entire set of feeding relationships
Indirect effects- influence of one species (donor) transmitted through second species (transmitter) to third species (receiver)
complex communities
interaction strength- measure of the effect of one species population size on another species population size
interactions can be: direct/indirect, +ve, -ve or null
Indirect
apparent competition-multiple non competing prey species elevates predator abundance/increased predation pressure
trophic cascade-effects at one trophic level can effect species abundance at another
keystone species-species tightly connected within food web
Complexity-does it lead to stability (less fluctuation in species population abundances)
fragile community: sensitive to pertubations
artificial communities
human activities


Dynamic communites-always changing
changes: niche differentiation, species dispersal/competition, trophic structures/pathways, temporal, spatial
agents: subtle, catastrophic, abiotic vs biotic, natural vs human
succession-process of change in species composition as result of agents of change
Abiotic change
disturbance-physically injures/kills individuals, creates change for others to grow/reproduce
stress- reduces growth/reproduction of individuals, creates opportunity for others
Biotic changedisturbance (same as for abiotic)
Succession
involves colonisation/extinction of community species due to agents of change
stages: pioneer-after disturbance
climax-equilibrium state, little change
Primary succession-colonisation of habitats devoid of life
can be slow, first arrivals face inhospitable habitats
basic resources
pioneers must withstand physiological stress to transform habitat
Secondary succession
reestablishment of community which most organisms have been destroyed
after agents of change
surviving species very important

Facilitation model
only pioneer species can be established, make site more suitable
dominant species replace/reduce pioneer abundance (competition)
Tolerance model
any species can establish, has no effect on subsequent recruitment
dominant species will still take over

Inhibition model
any species can establish, modifies environment inhibits growth of later species
as long as early species persist, excludes/suppresses others
Factors influencing succession:
site conditions, events after succession, species interaction, colonist availability, seeds, weather
early species-fast growing, well dispersed
later- competitors, stress tolerant
Functional groups: set of species with similar functional characteristics related to one ecosystem service
similar community assemblages reoccur through convergent evolution
defined using food type, feeding habit, structure, nitrogen fixers etc
macro/micro evolution
macro: geological time scale, above species level, compounded effects of microevolution
micro: human timescale, within species
twin filter model
unifying filter-trait convergence
diversifying filter-trait divergence
eco-evolution: response to disturbance events, variation in productivity, environmental change
fluctuation in community structure
Community genetics-evolutionary genetic processes occur among interacting populations
in communities
Community ecology-study of patterns in structure/behaviour of multispecies assemblages
ecosystem ecology-concerned with structure and behaviour of systems focus on energy and matter flux
Changing climate
Milankovich wobbles-earth axis tilt, climate fluctuations (ice ages)
plate tectonics-land mass moves, climate changes
can change landscape, mountains, rainfall etc
Mountains-increased physical/chemical weathering, increased CO2 usage

Mass extinction-


Pulse-rapid


press-slow (geologically)


3 main time period extinctions


Late Ordovician


earth had large CO2 conc, earth warmed


ice melted, organisms adapted to cold died



Ocean circulation-difference between poles/tropics, continent positions


cold water sinks, engine of circulation


evaporation increases salinity


colder earth, larger circulation


consequences: oxygenation, nutrients, carbon removal,

Ordovician cause:


1-mountains thrown up, chemical weathering, CO2 removed, cooling begins


2-cooling increases ocean circulation, increase in nutrient/oxygen cycle, marine productivity increases, CO2 removed, earth cools

mass ice sheets, glacial weathering. no chemical weathering, earth slowly warms

Ordivician final:


earth warming, ice sheets retreat rapidly


cold adapted organisms die

Extinction 2: Permian


land joined as pangea, very dry


lots CO2, temp rose


slow warming, methane hydrate unstable, mass free methane (rapid warming)


warm sea, no circulation so no oxygen/nutrients


anaerobic marine organisms, warmer still


over 80% of all organisms


however important, increased diversity in future





3rd extinction- K/T boundary (dinosaurs)


asteroids impact in mexico (65 mya)


emitted substances-CO2, SO2, dust


dust clods etc produce volcanic winter, solaar radiation reflected


other factors-volcanic activity india, rising sea levels





Aliens-invasive, competition for native species


asymmetric competition-one species harmed more than other


amensal-one harms another


human introduction, geographical land change



Invasion stages-from native habitat


1-captivation/cultivation


2-survival in wild


3-naturalised


4-spreading


5-pest!


1 in 10 rule


escape-establish-expand

Pests
location-certain environments better suited to invasion
remote islands-good (hawaii)
continental, high biodiversity-bad (china)
Land/sea-marine, not easy to invade
Habitat. aggression, fecundity

Habitat alteration


1-add species (facultative mutualism), super gneralist


2-remove species (total,local or frequency extinction)


3-habitat alteration (plantation, grazers), monoculture


4-Pollutants (pesticides/fertilizers, industrial, CO2)


5-change climate (temp change, organisms move to ideal temp)


6-fragment habitat (reduced gene flow, however can increase biodiversity)

sustainability-protecting ourselves/own species


Conservation-protecting other species


many different levels (genes, species, ecosystem)


changing habitat, creates conservation problems


tools: best to leave alone







Conservation protection


ex situ (zoos), direct help (intervene at key life cycle points), remove/add species


fragment habitats, protect specific genetic alleles


habitat alteration-preserving natural


biocontrol- specialists


conservation requires understanding!

Our time period-Anthropocene


constant evidence of human activity


waste (oceans, plastics etc)


forest cover, agriculture


land animal biomass (domesticated, farming)


nitrogen flux





Total animal species-only estimate:


1-comparison well studied groups


2-extrapolate using body size


3-estimate diversity of most numerous groups


ratio of tropical/temperate 1:2


no. species increases exponentially as size decreases

Modern extinction rates-background natural extinction around 2 species per year


current rate around 350x greater, 700 per year


coral bleaching, deforestation


habitat repair etc required


accelerated evolution-hybrids, introgression (gene flow between species)

Sustainability-planet cannot cope with current human growth rate


overpopulation effects:


climate change, ecological degradation, starvation


accepting climate change?


profit, fear, ideology