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22 Cards in this Set

  • Front
  • Back

What process joins amino acids together?

Polymerisation

What is a chain of amino acids called?

A polypeptide chain

What have to be combined to make a protein?

Polypeptides

What is the chemical formula for the amino group in an amino acid?

NH2

What is the chemical formula for the carboxylic group in an amino acid?

COOH

What elements are found within the R group?

Hydrogen


Oxygen


Nitrogen


Sulphur


Carbon

What does the joining of two amino acids form?

Dipeptide joined by a peptide bond

What process joins two amino acids together, how?

Condensation by removing a water molecule

How is water made during the condensation reaction between two amino acids?

Made by combining OH from carboxylic group of one amino acid and a H from the amino group of the other amino acid


How is the primary structure of a protein made?

Many amino acid monomers joined through polymerisation

Describe the primary structure of a protein

Large number of amino acids arranged in a sequence to form a polypeptide chain

What does the primary structure of a protein determine?


Why?

The ultimate shape of the protein and hence its function.


If the sequence of amino acids differ, the bonds made in the tertiary structure change which therefore changes the overall shape

How is the secondary structure formed?

The -NH group has an overall positive charge due to hydrogen to the right of the peptide bond


The -C=O group has an overall negative charge due to oxygen to the left of the peptide bond



These two groups therefore readily form a weak hydrogen bond


This causes the long polypeptide chain to be twisted into a 3D shape known as an alpha helix

What two things are formed in secondary structure of a protein?

Alpha helix


Beta pleated sheet

How is the tertiary structure formed?

The alpha helices of the secondary structure can be twisted and folded to create a unique, 3D structure known as the tertiary structure

Name the three bonds that hold the tertiary structure together in order of strength from weakest to strongest

Hydrogen


Ionic-Broken by changes in pH


Disulphide

Why is the 3-D shape (tertiary structure) of the protein important?

Determines their function


It makes the protein distinctive and allows it to recognise and be recognised by other molecules.


It can therefore interact with them in a very specific way.

What is the quaternary structure of a protein?

Numerous individual polypeptide chains that are linked in various ways, a very complex structure that only the larger proteins have


Give an example of a protein that has a quaternary structure

Haemoglobin

What is the most reliable protein test?

The Biuret test-Detects peptide bonds



1. Measure equal amounts of sample and sodium hydroxide to a test tube


2. Add a few drops of dilute copper sulphate and mix


3. If the solution turns purple it means there is a protein present

What functions do fibrous proteins have such as collagen

Structural functions

What functions do globular proteins have such as enzymes and haemoglobin?

Metabolic functions