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20 Cards in this Set

  • Front
  • Back

Hydrophobic


Doesn't contribute to hydrophobic interactions


Nonpolar


Aliphatic


Hydrogen R group- most simple


Low steric hinderance

Hydrophobic
Nonpolar 
Aliphatic  
Methyl R group

Hydrophobic


Nonpolar


Aliphatic


Methyl R group

Hydrophobic

Nonpolar 
Aliphatic  
Isopropyl R group

Hydrophobic


Nonpolar


Aliphatic


Isopropyl R group



Hydrophobic

Nonpolar
Aliphatic
Isobutyl R group

Hydrophobic


Nonpolar


Aliphatic


Isobutyl R group

Hydrophobic

Nonpolar
Aliphatic 
Sec-butyl R group

Hydrophobic


Nonpolar


Aliphatic


Sec-butyl R group

Hydrophobic

Nonpolar
Aliphatic
Thioether in its R group

Hydrophobic


Nonpolar


Aliphatic


Thioether in its R group

Hydrophobic
Nonpolar 
Aliphatic 
R group is a 4 Carbon ring bonded to N terminus Bond flexibility decreased

Hydrophobic


Nonpolar


Aliphatic


R group is a 4 Carbon ring bonded to N terminus Bond flexibility decreased

Hydrophobic
Nonpolar
AROMATIC- most nonpolar of aromatics
R group contains a phenyl (benzene)

Hydrophobic


Nonpolar


AROMATIC- most nonpolar of aromatics


R group contains a phenyl (benzene)



Hydrophobic
Nonpolar
AROMATIC
R group contains an indole ring

Hydrophobic


Nonpolar


AROMATIC


R group contains an indole ring

Polar Uncharged
Methyl alcohol R group
Polar

Uncharged


Methyl alcohol R group

Polar 
Uncharged 
Ethyl alcohol R group 

Polar


Uncharged


Ethyl alcohol R group

Polar
Uncharged
AROMATIC
Phenol R  group
(a benzene attached to an alcohol group)
Forms H bonds

Polar


Uncharged


AROMATIC


Phenol R group


(a benzene attached to an alcohol group)


Forms H bonds


pKa= 10.9


        Polar 
Uncharged
               Thiol group -SH
Forms disulfide         bonds AAs of peptide chains 
Stabilizes tertiary and quaternary structure
pKa= 8.3

Polar


Uncharged


Thiol group -SH


Forms disulfide bonds AAs of peptide chains


Stabilizes tertiary and quaternary structure


pKa= 8.3

Polar 
Uncharged 
Carboxamide R group
(Shorter than 
Glutamine)

Polar


Uncharged


Carboxamide R group


(Shorter than


Glutamine)

Polar 
Uncharged
Carboxamide R group
(longer than Asparagine).

Polar


Uncharged


Carboxamide R group


(longer than Asparagine).

Positive
Polar 
BASIC at biological pH 
R group has second 
primary amino group 
pKa= 10.8 

Positive


Polar


BASIC at biological pH


R group has second


primary amino group


pKa= 10.8

Positive
Polar 
BASIC at biological pH 
Guanidinium R- group
pKa=12.5 

Positive


Polar


BASIC at biological pH


Guanidinium R- group


pKa=12.5

Positive
Polar 
BASIC and ACIDIC
at biological PH
Aromatic imidazole R group
 pKa= 6.0 

Positive


Polar


BASIC and ACIDIC


at biological PH


Aromatic imidazole R group


pKa= 6.0

Negative
Polar 
ACIDIC 
Carboxylic acid R group 
shorter than glutamate
pKa= 4.1 

Negative


Polar


ACIDIC


Carboxylic acid R group


shorter than glutamate


pKa= 4.1

Negative
Polar 
ACIDIC
Carboxylic acid R-group 
longer than aspartate 
pKa=4.1 

Negative


Polar


ACIDIC


Carboxylic acid R-group


longer than aspartate


pKa=4.1